Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01293:01292
Extra
PDB:
ATOM 1 O3' U A1292 9.644 122.683 65.215 1.00 34.72 O
ATOM 2 P C A1293 9.521 124.256 64.949 1.00 35.38 P
ATOM 3 OP1 C A1293 8.843 124.396 63.644 1.00 36.90 O
ATOM 4 OP2 C A1293 10.848 124.868 65.149 1.00 36.43 O
ATOM 5 O5' C A1293 8.556 124.792 66.098 1.00 34.57 O
ATOM 6 C5' C A1293 7.144 124.512 66.075 1.00 35.59 C
ATOM 7 C4' C A1293 6.472 125.086 67.301 1.00 37.28 C
ATOM 8 O4' C A1293 7.117 124.551 68.485 1.00 37.35 O
ATOM 9 C3' C A1293 6.571 126.593 67.468 1.00 38.26 C
ATOM 10 O3' C A1293 5.550 127.266 66.740 1.00 41.28 O
ATOM 11 C2' C A1293 6.408 126.767 68.971 1.00 37.64 C
ATOM 12 O2' C A1293 5.072 126.683 69.413 1.00 39.51 O
ATOM 13 C1' C A1293 7.162 125.548 69.495 1.00 37.66 C
ATOM 14 N1 C A1293 8.572 125.834 69.825 1.00 38.11 N
ATOM 15 C2 C A1293 8.861 126.562 70.991 1.00 38.65 C
ATOM 16 O2 C A1293 7.927 126.953 71.710 1.00 38.63 O
ATOM 17 N3 C A1293 10.144 126.816 71.305 1.00 38.55 N
ATOM 18 C4 C A1293 11.124 126.373 70.520 1.00 37.99 C
ATOM 19 N4 C A1293 12.377 126.641 70.882 1.00 39.42 N
ATOM 20 C5 C A1293 10.863 125.637 69.331 1.00 37.31 C
ATOM 21 C6 C A1293 9.588 125.397 69.021 1.00 37.38 C
ATOM 22 P C A1294 5.707 128.830 66.398 1.00 44.29 P
ATOM 23 OP1 C A1294 4.576 129.233 65.521 1.00 45.79 O
ATOM 24 OP2 C A1294 7.101 129.063 65.941 1.00 45.88 O
ATOM 25 O5' C A1294 5.549 129.557 67.807 1.00 43.47 O
TER
ATOM 1 O3' C B1291 14.711 119.246 65.087 1.00 37.29 O
ATOM 2 P U B1292 14.448 120.790 64.733 1.00 39.18 P
ATOM 3 OP1 U B1292 14.253 120.854 63.262 1.00 39.49 O
ATOM 4 OP2 U B1292 15.514 121.617 65.369 1.00 39.64 O
ATOM 5 O5' U B1292 13.071 121.118 65.465 1.00 36.96 O
ATOM 6 C5' U B1292 11.885 120.372 65.169 1.00 35.75 C
ATOM 7 C4' U B1292 10.785 120.736 66.132 1.00 36.45 C
ATOM 8 O4' U B1292 11.169 120.359 67.480 1.00 37.50 O
ATOM 9 C3' U B1292 10.473 122.216 66.258 1.00 35.26 C
ATOM 10 O3' U B1292 9.644 122.683 65.215 1.00 34.72 O
ATOM 11 C2' U B1292 9.767 122.280 67.601 1.00 36.20 C
ATOM 12 O2' U B1292 8.410 121.900 67.543 1.00 35.38 O
ATOM 13 C1' U B1292 10.565 121.251 68.405 1.00 37.61 C
ATOM 14 N1 U B1292 11.611 121.899 69.209 1.00 38.37 N
ATOM 15 C2 U B1292 11.210 122.523 70.380 1.00 39.79 C
ATOM 16 O2 U B1292 10.052 122.546 70.763 1.00 40.67 O
ATOM 17 N3 U B1292 12.211 123.124 71.088 1.00 40.11 N
ATOM 18 C4 U B1292 13.539 123.169 70.762 1.00 40.35 C
ATOM 19 O4 U B1292 14.325 123.729 71.532 1.00 41.40 O
ATOM 20 C5 U B1292 13.880 122.504 69.536 1.00 39.11 C
ATOM 21 C6 U B1292 12.929 121.905 68.822 1.00 37.24 C
ATOM 22 P C B1293 9.521 124.256 64.949 1.00 35.38 P
ATOM 23 OP1 C B1293 8.843 124.396 63.644 1.00 36.90 O
ATOM 24 OP2 C B1293 10.848 124.868 65.149 1.00 36.43 O
ATOM 25 O5' C B1293 8.556 124.792 66.098 1.00 34.57 O
TER
ATOM 2 P C A1293 9.521 124.256 64.949 1.00 35.38 P
ATOM 3 OP1 C A1293 8.843 124.396 63.644 1.00 36.90 O
ATOM 4 OP2 C A1293 10.848 124.868 65.149 1.00 36.43 O
ATOM 5 O5' C A1293 8.556 124.792 66.098 1.00 34.57 O
ATOM 6 C5' C A1293 7.144 124.512 66.075 1.00 35.59 C
ATOM 7 C4' C A1293 6.472 125.086 67.301 1.00 37.28 C
ATOM 8 O4' C A1293 7.117 124.551 68.485 1.00 37.35 O
ATOM 9 C3' C A1293 6.571 126.593 67.468 1.00 38.26 C
ATOM 10 O3' C A1293 5.550 127.266 66.740 1.00 41.28 O
ATOM 11 C2' C A1293 6.408 126.767 68.971 1.00 37.64 C
ATOM 12 O2' C A1293 5.072 126.683 69.413 1.00 39.51 O
ATOM 13 C1' C A1293 7.162 125.548 69.495 1.00 37.66 C
ATOM 14 N1 C A1293 8.572 125.834 69.825 1.00 38.11 N
ATOM 15 C2 C A1293 8.861 126.562 70.991 1.00 38.65 C
ATOM 16 O2 C A1293 7.927 126.953 71.710 1.00 38.63 O
ATOM 17 N3 C A1293 10.144 126.816 71.305 1.00 38.55 N
ATOM 18 C4 C A1293 11.124 126.373 70.520 1.00 37.99 C
ATOM 19 N4 C A1293 12.377 126.641 70.882 1.00 39.42 N
ATOM 20 C5 C A1293 10.863 125.637 69.331 1.00 37.31 C
ATOM 21 C6 C A1293 9.588 125.397 69.021 1.00 37.38 C
ATOM 22 P C A1294 5.707 128.830 66.398 1.00 44.29 P
ATOM 23 OP1 C A1294 4.576 129.233 65.521 1.00 45.79 O
ATOM 24 OP2 C A1294 7.101 129.063 65.941 1.00 45.88 O
ATOM 25 O5' C A1294 5.549 129.557 67.807 1.00 43.47 O
TER
ATOM 1 O3' C B1291 14.711 119.246 65.087 1.00 37.29 O
ATOM 2 P U B1292 14.448 120.790 64.733 1.00 39.18 P
ATOM 3 OP1 U B1292 14.253 120.854 63.262 1.00 39.49 O
ATOM 4 OP2 U B1292 15.514 121.617 65.369 1.00 39.64 O
ATOM 5 O5' U B1292 13.071 121.118 65.465 1.00 36.96 O
ATOM 6 C5' U B1292 11.885 120.372 65.169 1.00 35.75 C
ATOM 7 C4' U B1292 10.785 120.736 66.132 1.00 36.45 C
ATOM 8 O4' U B1292 11.169 120.359 67.480 1.00 37.50 O
ATOM 9 C3' U B1292 10.473 122.216 66.258 1.00 35.26 C
ATOM 10 O3' U B1292 9.644 122.683 65.215 1.00 34.72 O
ATOM 11 C2' U B1292 9.767 122.280 67.601 1.00 36.20 C
ATOM 12 O2' U B1292 8.410 121.900 67.543 1.00 35.38 O
ATOM 13 C1' U B1292 10.565 121.251 68.405 1.00 37.61 C
ATOM 14 N1 U B1292 11.611 121.899 69.209 1.00 38.37 N
ATOM 15 C2 U B1292 11.210 122.523 70.380 1.00 39.79 C
ATOM 16 O2 U B1292 10.052 122.546 70.763 1.00 40.67 O
ATOM 17 N3 U B1292 12.211 123.124 71.088 1.00 40.11 N
ATOM 18 C4 U B1292 13.539 123.169 70.762 1.00 40.35 C
ATOM 19 O4 U B1292 14.325 123.729 71.532 1.00 41.40 O
ATOM 20 C5 U B1292 13.880 122.504 69.536 1.00 39.11 C
ATOM 21 C6 U B1292 12.929 121.905 68.822 1.00 37.24 C
ATOM 22 P C B1293 9.521 124.256 64.949 1.00 35.38 P
ATOM 23 OP1 C B1293 8.843 124.396 63.644 1.00 36.90 O
ATOM 24 OP2 C B1293 10.848 124.868 65.149 1.00 36.43 O
ATOM 25 O5' C B1293 8.556 124.792 66.098 1.00 34.57 O
TER
Atoms:
C2: (8.861,126.562,70.991)
OP1: (8.843,124.396,63.644)
OP2: (10.848,124.868,65.149)
C4: (11.124,126.373,70.520)
O5': (8.556,124.792,66.098)
C3': (6.571,126.593,67.468)
C1': (7.162,125.548,69.495)
O4': (7.117,124.551,68.485)
C5': (7.144,124.512,66.075)
P: (9.521,124.256,64.949)
O2: (7.927,126.953,71.710)
C4': (6.472,125.086,67.301)
C2': (6.408,126.767,68.971)
O2': (5.072,126.683,69.413)
N1: (8.572,125.834,69.825)
N3: (10.144,126.816,71.305)
N4: (12.377,126.641,70.882)
C6: (9.588,125.397,69.021)
C5: (10.863,125.637,69.331)
O3': (5.550,127.266,66.740)
OP1: (8.843,124.396,63.644)
OP2: (10.848,124.868,65.149)
C4: (11.124,126.373,70.520)
O5': (8.556,124.792,66.098)
C3': (6.571,126.593,67.468)
C1': (7.162,125.548,69.495)
O4': (7.117,124.551,68.485)
C5': (7.144,124.512,66.075)
P: (9.521,124.256,64.949)
O2: (7.927,126.953,71.710)
C4': (6.472,125.086,67.301)
C2': (6.408,126.767,68.971)
O2': (5.072,126.683,69.413)
N1: (8.572,125.834,69.825)
N3: (10.144,126.816,71.305)
N4: (12.377,126.641,70.882)
C6: (9.588,125.397,69.021)
C5: (10.863,125.637,69.331)
O3': (5.550,127.266,66.740)
C4: (13.539,123.169,70.762)
N3: (12.211,123.124,71.088)
OP1: (14.253,120.854,63.262)
OP2: (15.514,121.617,65.369)
C2: (11.210,122.523,70.380)
C1': (10.565,121.251,68.405)
C3': (10.473,122.216,66.258)
O5': (13.071,121.118,65.465)
O4': (11.169,120.359,67.480)
C5': (11.885,120.372,65.169)
P: (14.448,120.790,64.733)
C4': (10.785,120.736,66.132)
C2': (9.767,122.280,67.601)
O2': (8.410,121.900,67.543)
N1: (11.611,121.899,69.209)
O4: (14.325,123.729,71.532)
O2: (10.052,122.546,70.763)
C6: (12.929,121.905,68.822)
C5: (13.880,122.504,69.536)
O3': (9.644,122.683,65.215)
N3: (12.211,123.124,71.088)
OP1: (14.253,120.854,63.262)
OP2: (15.514,121.617,65.369)
C2: (11.210,122.523,70.380)
C1': (10.565,121.251,68.405)
C3': (10.473,122.216,66.258)
O5': (13.071,121.118,65.465)
O4': (11.169,120.359,67.480)
C5': (11.885,120.372,65.169)
P: (14.448,120.790,64.733)
C4': (10.785,120.736,66.132)
C2': (9.767,122.280,67.601)
O2': (8.410,121.900,67.543)
N1: (11.611,121.899,69.209)
O4: (14.325,123.729,71.532)
O2: (10.052,122.546,70.763)
C6: (12.929,121.905,68.822)
C5: (13.880,122.504,69.536)
O3': (9.644,122.683,65.215)
Image (generated by PyMOL):