Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0601:0600
Extra
PDB:
ATOM 1 O3' U A 600 18.799 131.789 101.304 1.00 54.54 O
ATOM 2 P C A 601 19.351 130.504 102.098 1.00 56.16 P
ATOM 3 OP1 C A 601 20.257 131.016 103.161 1.00 56.27 O
ATOM 4 OP2 C A 601 19.851 129.495 101.129 1.00 54.00 O
ATOM 5 O5' C A 601 18.056 129.921 102.818 1.00 55.51 O
ATOM 6 C5' C A 601 17.470 130.618 103.932 1.00 54.27 C
ATOM 7 C4' C A 601 16.332 129.821 104.513 1.00 53.18 C
ATOM 8 O4' C A 601 15.258 129.718 103.541 1.00 52.23 O
ATOM 9 C3' C A 601 16.643 128.377 104.855 1.00 53.38 C
ATOM 10 O3' C A 601 17.322 128.247 106.099 1.00 52.88 O
ATOM 11 C2' C A 601 15.253 127.759 104.872 1.00 52.74 C
ATOM 12 O2' C A 601 14.531 128.082 106.043 1.00 53.40 O
ATOM 13 C1' C A 601 14.610 128.466 103.679 1.00 50.43 C
ATOM 14 N1 C A 601 14.774 127.716 102.422 1.00 49.78 N
ATOM 15 C2 C A 601 13.897 126.658 102.146 1.00 49.65 C
ATOM 16 O2 C A 601 13.016 126.372 102.974 1.00 51.69 O
ATOM 17 N3 C A 601 14.033 125.971 100.989 1.00 47.70 N
ATOM 18 C4 C A 601 14.992 126.301 100.127 1.00 46.11 C
ATOM 19 N4 C A 601 15.080 125.602 98.998 1.00 44.28 N
ATOM 20 C5 C A 601 15.902 127.364 100.383 1.00 47.83 C
ATOM 21 C6 C A 601 15.760 128.039 101.532 1.00 49.03 C
ATOM 22 P U A 602 18.259 126.965 106.362 1.00 54.57 P
ATOM 23 OP1 U A 602 18.875 127.194 107.695 1.00 53.24 O
ATOM 24 OP2 U A 602 19.130 126.717 105.179 1.00 51.49 O
ATOM 25 O5' U A 602 17.234 125.749 106.463 1.00 52.16 O
TER
ATOM 1 O3' U B 599 19.226 133.570 95.276 1.00 50.05 O
ATOM 2 P U B 600 20.053 132.570 96.229 1.00 50.52 P
ATOM 3 OP1 U B 600 21.212 133.360 96.721 1.00 52.42 O
ATOM 4 OP2 U B 600 20.293 131.283 95.534 1.00 48.92 O
ATOM 5 O5' U B 600 19.076 132.304 97.460 1.00 50.73 O
ATOM 6 C5' U B 600 18.868 133.316 98.458 1.00 52.02 C
ATOM 7 C4' U B 600 17.763 132.912 99.407 1.00 53.76 C
ATOM 8 O4' U B 600 16.530 132.696 98.668 1.00 53.03 O
ATOM 9 C3' U B 600 17.954 131.614 100.174 1.00 53.97 C
ATOM 10 O3' U B 600 18.799 131.789 101.304 1.00 54.54 O
ATOM 11 C2' U B 600 16.523 131.279 100.577 1.00 53.27 C
ATOM 12 O2' U B 600 16.069 132.038 101.679 1.00 53.40 O
ATOM 13 C1' U B 600 15.756 131.703 99.322 1.00 53.00 C
ATOM 14 N1 U B 600 15.557 130.574 98.405 1.00 52.90 N
ATOM 15 C2 U B 600 14.417 129.813 98.574 1.00 53.84 C
ATOM 16 O2 U B 600 13.569 130.064 99.416 1.00 54.84 O
ATOM 17 N3 U B 600 14.304 128.747 97.721 1.00 54.76 N
ATOM 18 C4 U B 600 15.189 128.378 96.732 1.00 54.80 C
ATOM 19 O4 U B 600 14.934 127.400 96.028 1.00 55.41 O
ATOM 20 C5 U B 600 16.335 129.225 96.612 1.00 53.38 C
ATOM 21 C6 U B 600 16.475 130.267 97.428 1.00 52.36 C
ATOM 22 P C B 601 19.351 130.504 102.098 1.00 56.16 P
ATOM 23 OP1 C B 601 20.257 131.016 103.161 1.00 56.27 O
ATOM 24 OP2 C B 601 19.851 129.495 101.129 1.00 54.00 O
ATOM 25 O5' C B 601 18.056 129.921 102.818 1.00 55.51 O
TER
ATOM 2 P C A 601 19.351 130.504 102.098 1.00 56.16 P
ATOM 3 OP1 C A 601 20.257 131.016 103.161 1.00 56.27 O
ATOM 4 OP2 C A 601 19.851 129.495 101.129 1.00 54.00 O
ATOM 5 O5' C A 601 18.056 129.921 102.818 1.00 55.51 O
ATOM 6 C5' C A 601 17.470 130.618 103.932 1.00 54.27 C
ATOM 7 C4' C A 601 16.332 129.821 104.513 1.00 53.18 C
ATOM 8 O4' C A 601 15.258 129.718 103.541 1.00 52.23 O
ATOM 9 C3' C A 601 16.643 128.377 104.855 1.00 53.38 C
ATOM 10 O3' C A 601 17.322 128.247 106.099 1.00 52.88 O
ATOM 11 C2' C A 601 15.253 127.759 104.872 1.00 52.74 C
ATOM 12 O2' C A 601 14.531 128.082 106.043 1.00 53.40 O
ATOM 13 C1' C A 601 14.610 128.466 103.679 1.00 50.43 C
ATOM 14 N1 C A 601 14.774 127.716 102.422 1.00 49.78 N
ATOM 15 C2 C A 601 13.897 126.658 102.146 1.00 49.65 C
ATOM 16 O2 C A 601 13.016 126.372 102.974 1.00 51.69 O
ATOM 17 N3 C A 601 14.033 125.971 100.989 1.00 47.70 N
ATOM 18 C4 C A 601 14.992 126.301 100.127 1.00 46.11 C
ATOM 19 N4 C A 601 15.080 125.602 98.998 1.00 44.28 N
ATOM 20 C5 C A 601 15.902 127.364 100.383 1.00 47.83 C
ATOM 21 C6 C A 601 15.760 128.039 101.532 1.00 49.03 C
ATOM 22 P U A 602 18.259 126.965 106.362 1.00 54.57 P
ATOM 23 OP1 U A 602 18.875 127.194 107.695 1.00 53.24 O
ATOM 24 OP2 U A 602 19.130 126.717 105.179 1.00 51.49 O
ATOM 25 O5' U A 602 17.234 125.749 106.463 1.00 52.16 O
TER
ATOM 1 O3' U B 599 19.226 133.570 95.276 1.00 50.05 O
ATOM 2 P U B 600 20.053 132.570 96.229 1.00 50.52 P
ATOM 3 OP1 U B 600 21.212 133.360 96.721 1.00 52.42 O
ATOM 4 OP2 U B 600 20.293 131.283 95.534 1.00 48.92 O
ATOM 5 O5' U B 600 19.076 132.304 97.460 1.00 50.73 O
ATOM 6 C5' U B 600 18.868 133.316 98.458 1.00 52.02 C
ATOM 7 C4' U B 600 17.763 132.912 99.407 1.00 53.76 C
ATOM 8 O4' U B 600 16.530 132.696 98.668 1.00 53.03 O
ATOM 9 C3' U B 600 17.954 131.614 100.174 1.00 53.97 C
ATOM 10 O3' U B 600 18.799 131.789 101.304 1.00 54.54 O
ATOM 11 C2' U B 600 16.523 131.279 100.577 1.00 53.27 C
ATOM 12 O2' U B 600 16.069 132.038 101.679 1.00 53.40 O
ATOM 13 C1' U B 600 15.756 131.703 99.322 1.00 53.00 C
ATOM 14 N1 U B 600 15.557 130.574 98.405 1.00 52.90 N
ATOM 15 C2 U B 600 14.417 129.813 98.574 1.00 53.84 C
ATOM 16 O2 U B 600 13.569 130.064 99.416 1.00 54.84 O
ATOM 17 N3 U B 600 14.304 128.747 97.721 1.00 54.76 N
ATOM 18 C4 U B 600 15.189 128.378 96.732 1.00 54.80 C
ATOM 19 O4 U B 600 14.934 127.400 96.028 1.00 55.41 O
ATOM 20 C5 U B 600 16.335 129.225 96.612 1.00 53.38 C
ATOM 21 C6 U B 600 16.475 130.267 97.428 1.00 52.36 C
ATOM 22 P C B 601 19.351 130.504 102.098 1.00 56.16 P
ATOM 23 OP1 C B 601 20.257 131.016 103.161 1.00 56.27 O
ATOM 24 OP2 C B 601 19.851 129.495 101.129 1.00 54.00 O
ATOM 25 O5' C B 601 18.056 129.921 102.818 1.00 55.51 O
TER
Atoms:
C2: (13.897,126.658,102.146)
OP1: (20.257,131.016,103.161)
OP2: (19.851,129.495,101.129)
C4: (14.992,126.301,100.127)
O5': (18.056,129.921,102.818)
C3': (16.643,128.377,104.855)
C1': (14.610,128.466,103.679)
O4': (15.258,129.718,103.541)
C5': (17.470,130.618,103.932)
P: (19.351,130.504,102.098)
O2: (13.016,126.372,102.974)
C4': (16.332,129.821,104.513)
C2': (15.253,127.759,104.872)
O2': (14.531,128.082,106.043)
N1: (14.774,127.716,102.422)
N3: (14.033,125.971,100.989)
N4: (15.080,125.602,98.998)
C6: (15.760,128.039,101.532)
C5: (15.902,127.364,100.383)
O3': (17.322,128.247,106.099)
OP1: (20.257,131.016,103.161)
OP2: (19.851,129.495,101.129)
C4: (14.992,126.301,100.127)
O5': (18.056,129.921,102.818)
C3': (16.643,128.377,104.855)
C1': (14.610,128.466,103.679)
O4': (15.258,129.718,103.541)
C5': (17.470,130.618,103.932)
P: (19.351,130.504,102.098)
O2: (13.016,126.372,102.974)
C4': (16.332,129.821,104.513)
C2': (15.253,127.759,104.872)
O2': (14.531,128.082,106.043)
N1: (14.774,127.716,102.422)
N3: (14.033,125.971,100.989)
N4: (15.080,125.602,98.998)
C6: (15.760,128.039,101.532)
C5: (15.902,127.364,100.383)
O3': (17.322,128.247,106.099)
C4: (15.189,128.378,96.732)
N3: (14.304,128.747,97.721)
OP1: (21.212,133.360,96.721)
OP2: (20.293,131.283,95.534)
C2: (14.417,129.813,98.574)
C1': (15.756,131.703,99.322)
C3': (17.954,131.614,100.174)
O5': (19.076,132.304,97.460)
O4': (16.530,132.696,98.668)
C5': (18.868,133.316,98.458)
P: (20.053,132.570,96.229)
C4': (17.763,132.912,99.407)
C2': (16.523,131.279,100.577)
O2': (16.069,132.038,101.679)
N1: (15.557,130.574,98.405)
O4: (14.934,127.400,96.028)
O2: (13.569,130.064,99.416)
C6: (16.475,130.267,97.428)
C5: (16.335,129.225,96.612)
O3': (18.799,131.789,101.304)
N3: (14.304,128.747,97.721)
OP1: (21.212,133.360,96.721)
OP2: (20.293,131.283,95.534)
C2: (14.417,129.813,98.574)
C1': (15.756,131.703,99.322)
C3': (17.954,131.614,100.174)
O5': (19.076,132.304,97.460)
O4': (16.530,132.696,98.668)
C5': (18.868,133.316,98.458)
P: (20.053,132.570,96.229)
C4': (17.763,132.912,99.407)
C2': (16.523,131.279,100.577)
O2': (16.069,132.038,101.679)
N1: (15.557,130.574,98.405)
O4: (14.934,127.400,96.028)
O2: (13.569,130.064,99.416)
C6: (16.475,130.267,97.428)
C5: (16.335,129.225,96.612)
O3': (18.799,131.789,101.304)
Image (generated by PyMOL):