Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2578:A2577
Extra
PDB:
ATOM 1 O3' U A2577 -39.245 124.561 134.684 1.00 29.44 O
ATOM 2 P C A2578 -39.387 125.948 133.839 1.00 34.00 P
ATOM 3 OP1 C A2578 -40.683 125.954 133.109 1.00 37.97 O
ATOM 4 OP2 C A2578 -38.148 126.148 133.029 1.00 23.02 O
ATOM 5 O5' C A2578 -39.446 127.040 135.022 1.00 24.38 O
ATOM 6 C5' C A2578 -40.640 127.139 135.750 1.00 25.42 C
ATOM 7 C4' C A2578 -40.549 128.068 136.937 1.00 33.94 C
ATOM 8 O4' C A2578 -39.611 127.509 137.871 1.00 35.56 O
ATOM 9 C3' C A2578 -40.061 129.484 136.660 1.00 33.28 C
ATOM 10 O3' C A2578 -41.128 130.364 136.400 1.00 26.11 O
ATOM 11 C2' C A2578 -39.494 129.885 138.001 1.00 35.51 C
ATOM 12 O2' C A2578 -40.495 130.349 138.877 1.00 44.45 O
ATOM 13 C1' C A2578 -38.916 128.573 138.499 1.00 40.54 C
ATOM 14 N1 C A2578 -37.484 128.529 138.134 1.00 42.44 N
ATOM 15 C2 C A2578 -36.652 129.489 138.677 1.00 41.19 C
ATOM 16 O2 C A2578 -37.141 130.328 139.439 1.00 52.51 O
ATOM 17 N3 C A2578 -35.350 129.464 138.348 1.00 43.16 N
ATOM 18 C4 C A2578 -34.888 128.538 137.524 1.00 37.18 C
ATOM 19 N4 C A2578 -33.590 128.564 137.245 1.00 50.77 N
ATOM 20 C5 C A2578 -35.714 127.545 136.955 1.00 40.12 C
ATOM 21 C6 C A2578 -37.002 127.584 137.283 1.00 50.04 C
ATOM 22 P G A2579 -41.017 131.155 135.031 1.00 39.74 P
ATOM 23 OP1 G A2579 -42.380 131.596 134.650 1.00 46.30 O
ATOM 24 OP2 G A2579 -40.241 130.287 134.120 1.00 31.65 O
ATOM 25 O5' G A2579 -40.123 132.424 135.420 1.00 27.68 O
TER
ATOM 1 O3' G B2576 -35.227 120.954 132.455 1.00 42.00 O
ATOM 2 P U B2577 -35.789 122.395 131.987 1.00 34.89 P
ATOM 3 OP1 U B2577 -36.600 122.213 130.746 1.00 29.67 O
ATOM 4 OP2 U B2577 -34.616 123.330 131.971 1.00 35.14 O
ATOM 5 O5' U B2577 -36.724 122.826 133.218 1.00 22.68 O
ATOM 6 C5' U B2577 -37.463 121.924 134.017 1.00 22.70 C
ATOM 7 C4' U B2577 -37.823 122.626 135.304 1.00 31.21 C
ATOM 8 O4' U B2577 -36.716 122.470 136.228 1.00 43.16 O
ATOM 9 C3' U B2577 -37.951 124.134 135.155 1.00 39.15 C
ATOM 10 O3' U B2577 -39.245 124.561 134.684 1.00 29.44 O
ATOM 11 C2' U B2577 -37.740 124.536 136.599 1.00 41.91 C
ATOM 12 O2' U B2577 -38.903 124.198 137.318 1.00 34.92 O
ATOM 13 C1' U B2577 -36.566 123.643 137.023 1.00 42.54 C
ATOM 14 N1 U B2577 -35.140 124.252 136.963 1.00 34.60 N
ATOM 15 C2 U B2577 -34.642 124.913 138.059 1.00 39.11 C
ATOM 16 O2 U B2577 -35.310 125.032 139.061 1.00 40.81 O
ATOM 17 N3 U B2577 -33.356 125.436 137.949 1.00 54.63 N
ATOM 18 C4 U B2577 -32.467 125.385 136.868 1.00 52.76 C
ATOM 19 O4 U B2577 -31.308 125.898 136.887 1.00 17.13 O
ATOM 20 C5 U B2577 -33.079 124.667 135.766 1.00 60.65 C
ATOM 21 C6 U B2577 -34.330 124.152 135.849 1.00 49.40 C
ATOM 22 P C B2578 -39.387 125.948 133.839 1.00 34.00 P
ATOM 23 OP1 C B2578 -40.683 125.954 133.109 1.00 37.97 O
ATOM 24 OP2 C B2578 -38.148 126.148 133.029 1.00 23.02 O
ATOM 25 O5' C B2578 -39.446 127.040 135.022 1.00 24.38 O
TER
ATOM 2 P C A2578 -39.387 125.948 133.839 1.00 34.00 P
ATOM 3 OP1 C A2578 -40.683 125.954 133.109 1.00 37.97 O
ATOM 4 OP2 C A2578 -38.148 126.148 133.029 1.00 23.02 O
ATOM 5 O5' C A2578 -39.446 127.040 135.022 1.00 24.38 O
ATOM 6 C5' C A2578 -40.640 127.139 135.750 1.00 25.42 C
ATOM 7 C4' C A2578 -40.549 128.068 136.937 1.00 33.94 C
ATOM 8 O4' C A2578 -39.611 127.509 137.871 1.00 35.56 O
ATOM 9 C3' C A2578 -40.061 129.484 136.660 1.00 33.28 C
ATOM 10 O3' C A2578 -41.128 130.364 136.400 1.00 26.11 O
ATOM 11 C2' C A2578 -39.494 129.885 138.001 1.00 35.51 C
ATOM 12 O2' C A2578 -40.495 130.349 138.877 1.00 44.45 O
ATOM 13 C1' C A2578 -38.916 128.573 138.499 1.00 40.54 C
ATOM 14 N1 C A2578 -37.484 128.529 138.134 1.00 42.44 N
ATOM 15 C2 C A2578 -36.652 129.489 138.677 1.00 41.19 C
ATOM 16 O2 C A2578 -37.141 130.328 139.439 1.00 52.51 O
ATOM 17 N3 C A2578 -35.350 129.464 138.348 1.00 43.16 N
ATOM 18 C4 C A2578 -34.888 128.538 137.524 1.00 37.18 C
ATOM 19 N4 C A2578 -33.590 128.564 137.245 1.00 50.77 N
ATOM 20 C5 C A2578 -35.714 127.545 136.955 1.00 40.12 C
ATOM 21 C6 C A2578 -37.002 127.584 137.283 1.00 50.04 C
ATOM 22 P G A2579 -41.017 131.155 135.031 1.00 39.74 P
ATOM 23 OP1 G A2579 -42.380 131.596 134.650 1.00 46.30 O
ATOM 24 OP2 G A2579 -40.241 130.287 134.120 1.00 31.65 O
ATOM 25 O5' G A2579 -40.123 132.424 135.420 1.00 27.68 O
TER
ATOM 1 O3' G B2576 -35.227 120.954 132.455 1.00 42.00 O
ATOM 2 P U B2577 -35.789 122.395 131.987 1.00 34.89 P
ATOM 3 OP1 U B2577 -36.600 122.213 130.746 1.00 29.67 O
ATOM 4 OP2 U B2577 -34.616 123.330 131.971 1.00 35.14 O
ATOM 5 O5' U B2577 -36.724 122.826 133.218 1.00 22.68 O
ATOM 6 C5' U B2577 -37.463 121.924 134.017 1.00 22.70 C
ATOM 7 C4' U B2577 -37.823 122.626 135.304 1.00 31.21 C
ATOM 8 O4' U B2577 -36.716 122.470 136.228 1.00 43.16 O
ATOM 9 C3' U B2577 -37.951 124.134 135.155 1.00 39.15 C
ATOM 10 O3' U B2577 -39.245 124.561 134.684 1.00 29.44 O
ATOM 11 C2' U B2577 -37.740 124.536 136.599 1.00 41.91 C
ATOM 12 O2' U B2577 -38.903 124.198 137.318 1.00 34.92 O
ATOM 13 C1' U B2577 -36.566 123.643 137.023 1.00 42.54 C
ATOM 14 N1 U B2577 -35.140 124.252 136.963 1.00 34.60 N
ATOM 15 C2 U B2577 -34.642 124.913 138.059 1.00 39.11 C
ATOM 16 O2 U B2577 -35.310 125.032 139.061 1.00 40.81 O
ATOM 17 N3 U B2577 -33.356 125.436 137.949 1.00 54.63 N
ATOM 18 C4 U B2577 -32.467 125.385 136.868 1.00 52.76 C
ATOM 19 O4 U B2577 -31.308 125.898 136.887 1.00 17.13 O
ATOM 20 C5 U B2577 -33.079 124.667 135.766 1.00 60.65 C
ATOM 21 C6 U B2577 -34.330 124.152 135.849 1.00 49.40 C
ATOM 22 P C B2578 -39.387 125.948 133.839 1.00 34.00 P
ATOM 23 OP1 C B2578 -40.683 125.954 133.109 1.00 37.97 O
ATOM 24 OP2 C B2578 -38.148 126.148 133.029 1.00 23.02 O
ATOM 25 O5' C B2578 -39.446 127.040 135.022 1.00 24.38 O
TER
Atoms:
C2: (-36.652,129.489,138.677)
OP1: (-40.683,125.954,133.109)
OP2: (-38.148,126.148,133.029)
C4: (-34.888,128.538,137.524)
O5': (-39.446,127.040,135.022)
C3': (-40.061,129.484,136.660)
C1': (-38.916,128.573,138.499)
O4': (-39.611,127.509,137.871)
C5': (-40.640,127.139,135.750)
P: (-39.387,125.948,133.839)
O2: (-37.141,130.328,139.439)
C4': (-40.549,128.068,136.937)
C2': (-39.494,129.885,138.001)
O2': (-40.495,130.349,138.877)
N1: (-37.484,128.529,138.134)
N3: (-35.350,129.464,138.348)
N4: (-33.590,128.564,137.245)
C6: (-37.002,127.584,137.283)
C5: (-35.714,127.545,136.955)
O3': (-41.128,130.364,136.400)
OP1: (-40.683,125.954,133.109)
OP2: (-38.148,126.148,133.029)
C4: (-34.888,128.538,137.524)
O5': (-39.446,127.040,135.022)
C3': (-40.061,129.484,136.660)
C1': (-38.916,128.573,138.499)
O4': (-39.611,127.509,137.871)
C5': (-40.640,127.139,135.750)
P: (-39.387,125.948,133.839)
O2: (-37.141,130.328,139.439)
C4': (-40.549,128.068,136.937)
C2': (-39.494,129.885,138.001)
O2': (-40.495,130.349,138.877)
N1: (-37.484,128.529,138.134)
N3: (-35.350,129.464,138.348)
N4: (-33.590,128.564,137.245)
C6: (-37.002,127.584,137.283)
C5: (-35.714,127.545,136.955)
O3': (-41.128,130.364,136.400)
C4: (-32.467,125.385,136.868)
N3: (-33.356,125.436,137.949)
OP1: (-36.600,122.213,130.746)
OP2: (-34.616,123.330,131.971)
C2: (-34.642,124.913,138.059)
C1': (-36.566,123.643,137.023)
C3': (-37.951,124.134,135.155)
O5': (-36.724,122.826,133.218)
O4': (-36.716,122.470,136.228)
C5': (-37.463,121.924,134.017)
P: (-35.789,122.395,131.987)
C4': (-37.823,122.626,135.304)
C2': (-37.740,124.536,136.599)
O2': (-38.903,124.198,137.318)
N1: (-35.140,124.252,136.963)
O4: (-31.308,125.898,136.887)
O2: (-35.310,125.032,139.061)
C6: (-34.330,124.152,135.849)
C5: (-33.079,124.667,135.766)
O3': (-39.245,124.561,134.684)
N3: (-33.356,125.436,137.949)
OP1: (-36.600,122.213,130.746)
OP2: (-34.616,123.330,131.971)
C2: (-34.642,124.913,138.059)
C1': (-36.566,123.643,137.023)
C3': (-37.951,124.134,135.155)
O5': (-36.724,122.826,133.218)
O4': (-36.716,122.470,136.228)
C5': (-37.463,121.924,134.017)
P: (-35.789,122.395,131.987)
C4': (-37.823,122.626,135.304)
C2': (-37.740,124.536,136.599)
O2': (-38.903,124.198,137.318)
N1: (-35.140,124.252,136.963)
O4: (-31.308,125.898,136.887)
O2: (-35.310,125.032,139.061)
C6: (-34.330,124.152,135.849)
C5: (-33.079,124.667,135.766)
O3': (-39.245,124.561,134.684)
Image (generated by PyMOL):