Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1322:A1352
Extra
PDB:
ATOM 1 O3' U A1321 221.171 140.524 -14.692 1.00 45.13 O
ATOM 2 P A A1322 221.047 141.613 -13.522 1.00 44.78 P
ATOM 3 OP1 A A1322 220.512 140.940 -12.301 1.00 43.94 O
ATOM 4 OP2 A A1322 220.344 142.765 -14.129 1.00 44.41 O
ATOM 5 O5' A A1322 222.555 142.015 -13.225 1.00 47.28 O
ATOM 6 C5' A A1322 223.131 141.853 -11.906 1.00 49.69 C
ATOM 7 C4' A A1322 224.334 142.752 -11.758 1.00 51.44 C
ATOM 8 O4' A A1322 225.419 142.239 -12.571 1.00 51.22 O
ATOM 9 C3' A A1322 224.104 144.198 -12.211 1.00 53.09 C
ATOM 10 O3' A A1322 224.953 145.059 -11.430 1.00 56.30 O
ATOM 11 C2' A A1322 224.659 144.178 -13.628 1.00 52.77 C
ATOM 12 O2' A A1322 225.052 145.442 -14.117 1.00 52.98 O
ATOM 13 C1' A A1322 225.862 143.265 -13.423 1.00 53.74 C
ATOM 14 N9 A A1322 226.459 142.694 -14.622 1.00 56.27 N
ATOM 15 C8 A A1322 226.097 141.591 -15.344 1.00 57.49 C
ATOM 16 N7 A A1322 226.866 141.367 -16.381 1.00 59.69 N
ATOM 17 C5 A A1322 227.797 142.395 -16.334 1.00 59.35 C
ATOM 18 C6 A A1322 228.882 142.727 -17.155 1.00 60.15 C
ATOM 19 N6 A A1322 229.228 142.034 -18.237 1.00 61.59 N
ATOM 20 N1 A A1322 229.610 143.813 -16.825 1.00 60.57 N
ATOM 21 C2 A A1322 229.257 144.514 -15.745 1.00 58.98 C
ATOM 22 N3 A A1322 228.259 144.307 -14.902 1.00 58.25 N
ATOM 23 C4 A A1322 227.558 143.217 -15.256 1.00 58.06 C
ATOM 24 P G A1323 224.349 146.326 -10.640 1.00 56.97 P
ATOM 25 OP1 G A1323 222.954 146.554 -11.116 1.00 56.23 O
ATOM 26 OP2 G A1323 225.327 147.418 -10.781 1.00 57.73 O
ATOM 27 O5' G A1323 224.329 145.811 -9.099 1.00 58.11 O
TER
ATOM 1 O3' A B1351 233.303 142.132 -20.096 1.00 46.01 O
ATOM 2 P A B1352 232.204 142.410 -21.236 1.00 45.63 P
ATOM 3 OP1 A B1352 232.847 143.077 -22.417 1.00 45.32 O
ATOM 4 OP2 A B1352 231.065 143.070 -20.567 1.00 46.71 O
ATOM 5 O5' A B1352 231.793 140.962 -21.705 1.00 45.36 O
ATOM 6 C5' A B1352 232.778 140.080 -22.263 1.00 45.75 C
ATOM 7 C4' A B1352 232.202 138.700 -22.453 1.00 46.29 C
ATOM 8 O4' A B1352 231.935 138.081 -21.167 1.00 45.90 O
ATOM 9 C3' A B1352 230.882 138.648 -23.201 1.00 45.38 C
ATOM 10 O3' A B1352 231.078 138.633 -24.584 1.00 45.98 O
ATOM 11 C2' A B1352 230.289 137.340 -22.719 1.00 46.31 C
ATOM 12 O2' A B1352 230.843 136.256 -23.434 1.00 45.79 O
ATOM 13 C1' A B1352 230.751 137.310 -21.256 1.00 47.15 C
ATOM 14 N9 A B1352 229.761 137.900 -20.348 1.00 48.50 N
ATOM 15 C8 A B1352 229.855 139.102 -19.690 1.00 49.11 C
ATOM 16 N7 A B1352 228.818 139.377 -18.940 1.00 49.78 N
ATOM 17 C5 A B1352 227.982 138.286 -19.113 1.00 48.93 C
ATOM 18 C6 A B1352 226.729 137.976 -18.586 1.00 48.31 C
ATOM 19 N6 A B1352 226.073 138.767 -17.742 1.00 47.83 N
ATOM 20 N1 A B1352 226.161 136.813 -18.958 1.00 48.35 N
ATOM 21 C2 A B1352 226.822 136.023 -19.806 1.00 47.92 C
ATOM 22 N3 A B1352 228.005 136.204 -20.372 1.00 48.58 N
ATOM 23 C4 A B1352 228.544 137.370 -19.980 1.00 48.69 C
ATOM 24 P U B1353 230.068 139.444 -25.532 1.00 47.87 P
ATOM 25 OP1 U B1353 230.520 139.244 -26.943 1.00 46.57 O
ATOM 26 OP2 U B1353 229.898 140.816 -24.983 1.00 48.39 O
ATOM 27 O5' U B1353 228.705 138.664 -25.357 1.00 48.90 O
TER
ATOM 2 P A A1322 221.047 141.613 -13.522 1.00 44.78 P
ATOM 3 OP1 A A1322 220.512 140.940 -12.301 1.00 43.94 O
ATOM 4 OP2 A A1322 220.344 142.765 -14.129 1.00 44.41 O
ATOM 5 O5' A A1322 222.555 142.015 -13.225 1.00 47.28 O
ATOM 6 C5' A A1322 223.131 141.853 -11.906 1.00 49.69 C
ATOM 7 C4' A A1322 224.334 142.752 -11.758 1.00 51.44 C
ATOM 8 O4' A A1322 225.419 142.239 -12.571 1.00 51.22 O
ATOM 9 C3' A A1322 224.104 144.198 -12.211 1.00 53.09 C
ATOM 10 O3' A A1322 224.953 145.059 -11.430 1.00 56.30 O
ATOM 11 C2' A A1322 224.659 144.178 -13.628 1.00 52.77 C
ATOM 12 O2' A A1322 225.052 145.442 -14.117 1.00 52.98 O
ATOM 13 C1' A A1322 225.862 143.265 -13.423 1.00 53.74 C
ATOM 14 N9 A A1322 226.459 142.694 -14.622 1.00 56.27 N
ATOM 15 C8 A A1322 226.097 141.591 -15.344 1.00 57.49 C
ATOM 16 N7 A A1322 226.866 141.367 -16.381 1.00 59.69 N
ATOM 17 C5 A A1322 227.797 142.395 -16.334 1.00 59.35 C
ATOM 18 C6 A A1322 228.882 142.727 -17.155 1.00 60.15 C
ATOM 19 N6 A A1322 229.228 142.034 -18.237 1.00 61.59 N
ATOM 20 N1 A A1322 229.610 143.813 -16.825 1.00 60.57 N
ATOM 21 C2 A A1322 229.257 144.514 -15.745 1.00 58.98 C
ATOM 22 N3 A A1322 228.259 144.307 -14.902 1.00 58.25 N
ATOM 23 C4 A A1322 227.558 143.217 -15.256 1.00 58.06 C
ATOM 24 P G A1323 224.349 146.326 -10.640 1.00 56.97 P
ATOM 25 OP1 G A1323 222.954 146.554 -11.116 1.00 56.23 O
ATOM 26 OP2 G A1323 225.327 147.418 -10.781 1.00 57.73 O
ATOM 27 O5' G A1323 224.329 145.811 -9.099 1.00 58.11 O
TER
ATOM 1 O3' A B1351 233.303 142.132 -20.096 1.00 46.01 O
ATOM 2 P A B1352 232.204 142.410 -21.236 1.00 45.63 P
ATOM 3 OP1 A B1352 232.847 143.077 -22.417 1.00 45.32 O
ATOM 4 OP2 A B1352 231.065 143.070 -20.567 1.00 46.71 O
ATOM 5 O5' A B1352 231.793 140.962 -21.705 1.00 45.36 O
ATOM 6 C5' A B1352 232.778 140.080 -22.263 1.00 45.75 C
ATOM 7 C4' A B1352 232.202 138.700 -22.453 1.00 46.29 C
ATOM 8 O4' A B1352 231.935 138.081 -21.167 1.00 45.90 O
ATOM 9 C3' A B1352 230.882 138.648 -23.201 1.00 45.38 C
ATOM 10 O3' A B1352 231.078 138.633 -24.584 1.00 45.98 O
ATOM 11 C2' A B1352 230.289 137.340 -22.719 1.00 46.31 C
ATOM 12 O2' A B1352 230.843 136.256 -23.434 1.00 45.79 O
ATOM 13 C1' A B1352 230.751 137.310 -21.256 1.00 47.15 C
ATOM 14 N9 A B1352 229.761 137.900 -20.348 1.00 48.50 N
ATOM 15 C8 A B1352 229.855 139.102 -19.690 1.00 49.11 C
ATOM 16 N7 A B1352 228.818 139.377 -18.940 1.00 49.78 N
ATOM 17 C5 A B1352 227.982 138.286 -19.113 1.00 48.93 C
ATOM 18 C6 A B1352 226.729 137.976 -18.586 1.00 48.31 C
ATOM 19 N6 A B1352 226.073 138.767 -17.742 1.00 47.83 N
ATOM 20 N1 A B1352 226.161 136.813 -18.958 1.00 48.35 N
ATOM 21 C2 A B1352 226.822 136.023 -19.806 1.00 47.92 C
ATOM 22 N3 A B1352 228.005 136.204 -20.372 1.00 48.58 N
ATOM 23 C4 A B1352 228.544 137.370 -19.980 1.00 48.69 C
ATOM 24 P U B1353 230.068 139.444 -25.532 1.00 47.87 P
ATOM 25 OP1 U B1353 230.520 139.244 -26.943 1.00 46.57 O
ATOM 26 OP2 U B1353 229.898 140.816 -24.983 1.00 48.39 O
ATOM 27 O5' U B1353 228.705 138.664 -25.357 1.00 48.90 O
TER
Atoms:
OP1: (220.512,140.940,-12.301)
OP2: (220.344,142.765,-14.129)
C3': (224.104,144.198,-12.211)
C1': (225.862,143.265,-13.423)
C5': (223.131,141.853,-11.906)
O4': (225.419,142.239,-12.571)
C8: (226.097,141.591,-15.344)
O2': (225.052,145.442,-14.117)
C6: (228.882,142.727,-17.155)
C5: (227.797,142.395,-16.334)
C4: (227.558,143.217,-15.256)
P: (221.047,141.613,-13.522)
C4': (224.334,142.752,-11.758)
C2': (224.659,144.178,-13.628)
C2: (229.257,144.514,-15.745)
N1: (229.610,143.813,-16.825)
N3: (228.259,144.307,-14.902)
N6: (229.228,142.034,-18.237)
N7: (226.866,141.367,-16.381)
N9: (226.459,142.694,-14.622)
O5': (222.555,142.015,-13.225)
O3': (224.953,145.059,-11.430)
OP2: (220.344,142.765,-14.129)
C3': (224.104,144.198,-12.211)
C1': (225.862,143.265,-13.423)
C5': (223.131,141.853,-11.906)
O4': (225.419,142.239,-12.571)
C8: (226.097,141.591,-15.344)
O2': (225.052,145.442,-14.117)
C6: (228.882,142.727,-17.155)
C5: (227.797,142.395,-16.334)
C4: (227.558,143.217,-15.256)
P: (221.047,141.613,-13.522)
C4': (224.334,142.752,-11.758)
C2': (224.659,144.178,-13.628)
C2: (229.257,144.514,-15.745)
N1: (229.610,143.813,-16.825)
N3: (228.259,144.307,-14.902)
N6: (229.228,142.034,-18.237)
N7: (226.866,141.367,-16.381)
N9: (226.459,142.694,-14.622)
O5': (222.555,142.015,-13.225)
O3': (224.953,145.059,-11.430)
OP1: (232.847,143.077,-22.417)
OP2: (231.065,143.070,-20.567)
C3': (230.882,138.648,-23.201)
C1': (230.751,137.310,-21.256)
C5': (232.778,140.080,-22.263)
O4': (231.935,138.081,-21.167)
C8: (229.855,139.102,-19.690)
O2': (230.843,136.256,-23.434)
C6: (226.729,137.976,-18.586)
C5: (227.982,138.286,-19.113)
C4: (228.544,137.370,-19.980)
P: (232.204,142.410,-21.236)
C4': (232.202,138.700,-22.453)
C2': (230.289,137.340,-22.719)
C2: (226.822,136.023,-19.806)
N1: (226.161,136.813,-18.958)
N3: (228.005,136.204,-20.372)
N6: (226.073,138.767,-17.742)
N7: (228.818,139.377,-18.940)
N9: (229.761,137.900,-20.348)
O5': (231.793,140.962,-21.705)
O3': (231.078,138.633,-24.584)
OP2: (231.065,143.070,-20.567)
C3': (230.882,138.648,-23.201)
C1': (230.751,137.310,-21.256)
C5': (232.778,140.080,-22.263)
O4': (231.935,138.081,-21.167)
C8: (229.855,139.102,-19.690)
O2': (230.843,136.256,-23.434)
C6: (226.729,137.976,-18.586)
C5: (227.982,138.286,-19.113)
C4: (228.544,137.370,-19.980)
P: (232.204,142.410,-21.236)
C4': (232.202,138.700,-22.453)
C2': (230.289,137.340,-22.719)
C2: (226.822,136.023,-19.806)
N1: (226.161,136.813,-18.958)
N3: (228.005,136.204,-20.372)
N6: (226.073,138.767,-17.742)
N7: (228.818,139.377,-18.940)
N9: (229.761,137.900,-20.348)
O5': (231.793,140.962,-21.705)
O3': (231.078,138.633,-24.584)
Image (generated by PyMOL):