ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:A150:A86

Extra

PDB:
ATOM 1 O3' G A 149 -12.928 31.284 15.368 1.00 24.86 O
ATOM 2 P A A 150 -13.577 29.940 14.776 1.00 27.70 P
ATOM 3 OP1 A A 150 -14.791 30.519 14.117 1.00 23.09 O
ATOM 4 OP2 A A 150 -13.650 28.877 15.809 1.00 27.27 O
ATOM 5 O5' A A 150 -12.526 29.506 13.679 1.00 25.82 O
ATOM 6 C5' A A 150 -12.566 30.085 12.381 1.00 25.33 C
ATOM 7 C4' A A 150 -11.682 29.313 11.429 1.00 28.07 C
ATOM 8 O4' A A 150 -10.275 29.617 11.690 1.00 24.30 O
ATOM 9 C3' A A 150 -11.801 27.787 11.507 1.00 24.63 C
ATOM 10 O3' A A 150 -11.602 27.234 10.210 1.00 25.81 O
ATOM 11 C2' A A 150 -10.587 27.405 12.345 1.00 23.83 C
ATOM 12 O2' A A 150 -10.136 26.080 12.190 1.00 26.64 O
ATOM 13 C1' A A 150 -9.586 28.388 11.756 1.00 22.03 C
ATOM 14 N9 A A 150 -8.279 28.419 12.420 1.00 25.14 N
ATOM 15 C8 A A 150 -7.951 27.964 13.672 1.00 23.82 C
ATOM 16 N7 A A 150 -6.668 28.052 13.930 1.00 23.01 N
ATOM 17 C5 A A 150 -6.120 28.580 12.765 1.00 20.77 C
ATOM 18 C6 A A 150 -4.801 28.908 12.392 1.00 20.47 C
ATOM 19 N6 A A 150 -3.739 28.753 13.179 1.00 18.62 N
ATOM 20 N1 A A 150 -4.610 29.412 11.150 1.00 20.71 N
ATOM 21 C2 A A 150 -5.660 29.566 10.336 1.00 22.41 C
ATOM 22 N3 A A 150 -6.939 29.294 10.576 1.00 20.52 N
ATOM 23 C4 A A 150 -7.096 28.782 11.815 1.00 22.90 C
ATOM 24 P U A 151 -12.854 26.725 9.339 1.00 30.25 P
ATOM 25 OP1 U A 151 -13.959 26.584 10.318 1.00 30.01 O
ATOM 26 OP2 U A 151 -12.322 25.552 8.601 1.00 28.97 O
ATOM 27 O5' U A 151 -13.140 27.943 8.355 1.00 31.57 O
TER

ATOM 1 O3' G B 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 2 P A B 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 3 OP1 A B 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 4 OP2 A B 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 5 O5' A B 86 0.763 29.440 11.631 1.00 20.36 O
ATOM 6 C5' A B 86 1.330 28.527 12.560 1.00 19.74 C
ATOM 7 C4' A B 86 0.911 27.089 12.323 1.00 20.00 C
ATOM 8 O4' A B 86 -0.508 26.908 12.609 1.00 23.62 O
ATOM 9 C3' A B 86 1.129 26.488 10.931 1.00 20.75 C
ATOM 10 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 11 C2' A B 86 -0.288 26.253 10.406 1.00 26.01 C
ATOM 12 O2' A B 86 -0.417 25.150 9.535 1.00 31.96 O
ATOM 13 C1' A B 86 -1.006 25.940 11.704 1.00 25.36 C
ATOM 14 N9 A B 86 -2.480 25.892 11.647 1.00 21.07 N
ATOM 15 C8 A B 86 -3.318 26.179 10.588 1.00 24.62 C
ATOM 16 N7 A B 86 -4.596 26.010 10.862 1.00 24.45 N
ATOM 17 C5 A B 86 -4.591 25.552 12.176 1.00 24.23 C
ATOM 18 C6 A B 86 -5.626 25.189 13.047 1.00 26.00 C
ATOM 19 N6 A B 86 -6.920 25.219 12.696 1.00 25.81 N
ATOM 20 N1 A B 86 -5.285 24.788 14.292 1.00 24.12 N
ATOM 21 C2 A B 86 -3.986 24.758 14.624 1.00 24.11 C
ATOM 22 N3 A B 86 -2.916 25.077 13.888 1.00 24.51 N
ATOM 23 C4 A B 86 -3.293 25.469 12.662 1.00 23.58 C
ATOM 24 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 25 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 26 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 27 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
TER

Atoms:
OP1: (-14.791,30.519,14.117)
OP2: (-13.650,28.877,15.809)
C3': (-11.801,27.787,11.507)
C1': (-9.586,28.388,11.756)
C5': (-12.566,30.085,12.381)
O4': (-10.275,29.617,11.690)
C8: (-7.951,27.964,13.672)
O2': (-10.136,26.080,12.190)
C6: (-4.801,28.908,12.392)
C5: (-6.120,28.580,12.765)
C4: (-7.096,28.782,11.815)
P: (-13.577,29.940,14.776)
C4': (-11.682,29.313,11.429)
C2': (-10.587,27.405,12.345)
C2: (-5.660,29.566,10.336)
N1: (-4.610,29.412,11.150)
N3: (-6.939,29.294,10.576)
N6: (-3.739,28.753,13.179)
N7: (-6.668,28.052,13.930)
N9: (-8.279,28.419,12.420)
O5': (-12.526,29.506,13.679)
O3': (-11.602,27.234,10.210)
OP1: (-0.560,31.436,10.956)
OP2: (-1.260,30.078,13.006)
C3': (1.129,26.488,10.931)
C1': (-1.006,25.940,11.704)
C5': (1.330,28.527,12.560)
O4': (-0.508,26.908,12.609)
C8: (-3.318,26.179,10.588)
O2': (-0.417,25.150,9.535)
C6: (-5.626,25.189,13.047)
C5: (-4.591,25.552,12.176)
C4: (-3.293,25.469,12.662)
P: (-0.178,30.609,12.133)
C4': (0.911,27.089,12.323)
C2': (-0.288,26.253,10.406)
C2: (-3.986,24.758,14.624)
N1: (-5.285,24.788,14.292)
N3: (-2.916,25.077,13.888)
N6: (-6.920,25.219,12.696)
N7: (-4.596,26.010,10.862)
N9: (-2.480,25.892,11.647)
O5': (0.763,29.440,11.631)
O3': (1.720,25.210,11.099)
Image (generated by PyMOL):
PyMOL image
show in jmol