Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01091:01189
Extra
PDB:
ATOM 1 O3' G A1090 48.762 96.704 129.766 1.00 49.26 O
ATOM 2 P A A1091 49.012 96.134 131.243 1.00 46.44 P
ATOM 3 OP1 A A1091 48.075 94.994 131.426 1.00 45.09 O
ATOM 4 OP2 A A1091 49.016 97.252 132.222 1.00 44.87 O
ATOM 5 O5' A A1091 50.485 95.555 131.157 1.00 43.58 O
ATOM 6 C5' A A1091 50.849 94.667 130.102 1.00 42.83 C
ATOM 7 C4' A A1091 52.324 94.411 130.148 1.00 43.24 C
ATOM 8 O4' A A1091 53.020 95.667 129.987 1.00 42.71 O
ATOM 9 C3' A A1091 52.811 93.871 131.477 1.00 42.97 C
ATOM 10 O3' A A1091 52.653 92.461 131.499 1.00 43.06 O
ATOM 11 C2' A A1091 54.265 94.319 131.500 1.00 43.50 C
ATOM 12 O2' A A1091 55.114 93.499 130.718 1.00 42.71 O
ATOM 13 C1' A A1091 54.157 95.690 130.828 1.00 42.73 C
ATOM 14 N9 A A1091 54.016 96.823 131.742 1.00 40.79 N
ATOM 15 C8 A A1091 52.868 97.489 132.096 1.00 40.60 C
ATOM 16 N7 A A1091 53.075 98.508 132.894 1.00 39.72 N
ATOM 17 C5 A A1091 54.448 98.505 133.090 1.00 39.22 C
ATOM 18 C6 A A1091 55.297 99.338 133.829 1.00 38.55 C
ATOM 19 N6 A A1091 54.874 100.384 134.536 1.00 37.46 N
ATOM 20 N1 A A1091 56.620 99.058 133.816 1.00 39.21 N
ATOM 21 C2 A A1091 57.046 98.009 133.106 1.00 38.79 C
ATOM 22 N3 A A1091 56.346 97.155 132.369 1.00 39.86 N
ATOM 23 C4 A A1091 55.038 97.462 132.400 1.00 40.22 C
ATOM 24 P A A1092 52.255 91.719 132.862 1.00 45.04 P
ATOM 25 OP1 A A1092 51.657 90.428 132.437 1.00 44.72 O
ATOM 26 OP2 A A1092 51.495 92.624 133.772 1.00 43.10 O
ATOM 27 O5' A A1092 53.661 91.394 133.523 1.00 43.11 O
TER
ATOM 1 O3' C B1188 55.660 103.212 137.717 1.00 41.09 O
ATOM 2 P A B1189 56.025 103.948 136.339 1.00 44.72 P
ATOM 3 OP1 A B1189 55.972 102.951 135.240 1.00 44.96 O
ATOM 4 OP2 A B1189 57.281 104.693 136.590 1.00 44.80 O
ATOM 5 O5' A B1189 54.862 105.014 136.118 1.00 43.36 O
ATOM 6 C5' A B1189 55.099 106.203 135.341 1.00 43.39 C
ATOM 7 C4' A B1189 53.803 106.730 134.768 1.00 44.58 C
ATOM 8 O4' A B1189 53.227 105.719 133.901 1.00 46.10 O
ATOM 9 C3' A B1189 52.712 107.102 135.766 1.00 44.72 C
ATOM 10 O3' A B1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 11 C2' A B1189 51.878 105.823 135.834 1.00 46.18 C
ATOM 12 O2' A B1189 50.534 106.053 136.210 1.00 45.68 O
ATOM 13 C1' A B1189 51.958 105.328 134.390 1.00 47.06 C
ATOM 14 N9 A B1189 51.862 103.876 134.241 1.00 47.52 N
ATOM 15 C8 A B1189 52.850 102.959 134.492 1.00 48.91 C
ATOM 16 N7 A B1189 52.513 101.727 134.205 1.00 50.79 N
ATOM 17 C5 A B1189 51.209 101.835 133.748 1.00 48.39 C
ATOM 18 C6 A B1189 50.295 100.879 133.268 1.00 47.98 C
ATOM 19 N6 A B1189 50.563 99.575 133.167 1.00 46.27 N
ATOM 20 N1 A B1189 49.079 101.316 132.888 1.00 48.47 N
ATOM 21 C2 A B1189 48.810 102.626 132.987 1.00 49.60 C
ATOM 22 N3 A B1189 49.588 103.619 133.417 1.00 48.37 N
ATOM 23 C4 A B1189 50.788 103.151 133.785 1.00 47.66 C
ATOM 24 P A B1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 25 OP1 A B1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 26 OP2 A B1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 27 O5' A B1190 53.723 109.865 134.604 1.00 43.39 O
TER
ATOM 2 P A A1091 49.012 96.134 131.243 1.00 46.44 P
ATOM 3 OP1 A A1091 48.075 94.994 131.426 1.00 45.09 O
ATOM 4 OP2 A A1091 49.016 97.252 132.222 1.00 44.87 O
ATOM 5 O5' A A1091 50.485 95.555 131.157 1.00 43.58 O
ATOM 6 C5' A A1091 50.849 94.667 130.102 1.00 42.83 C
ATOM 7 C4' A A1091 52.324 94.411 130.148 1.00 43.24 C
ATOM 8 O4' A A1091 53.020 95.667 129.987 1.00 42.71 O
ATOM 9 C3' A A1091 52.811 93.871 131.477 1.00 42.97 C
ATOM 10 O3' A A1091 52.653 92.461 131.499 1.00 43.06 O
ATOM 11 C2' A A1091 54.265 94.319 131.500 1.00 43.50 C
ATOM 12 O2' A A1091 55.114 93.499 130.718 1.00 42.71 O
ATOM 13 C1' A A1091 54.157 95.690 130.828 1.00 42.73 C
ATOM 14 N9 A A1091 54.016 96.823 131.742 1.00 40.79 N
ATOM 15 C8 A A1091 52.868 97.489 132.096 1.00 40.60 C
ATOM 16 N7 A A1091 53.075 98.508 132.894 1.00 39.72 N
ATOM 17 C5 A A1091 54.448 98.505 133.090 1.00 39.22 C
ATOM 18 C6 A A1091 55.297 99.338 133.829 1.00 38.55 C
ATOM 19 N6 A A1091 54.874 100.384 134.536 1.00 37.46 N
ATOM 20 N1 A A1091 56.620 99.058 133.816 1.00 39.21 N
ATOM 21 C2 A A1091 57.046 98.009 133.106 1.00 38.79 C
ATOM 22 N3 A A1091 56.346 97.155 132.369 1.00 39.86 N
ATOM 23 C4 A A1091 55.038 97.462 132.400 1.00 40.22 C
ATOM 24 P A A1092 52.255 91.719 132.862 1.00 45.04 P
ATOM 25 OP1 A A1092 51.657 90.428 132.437 1.00 44.72 O
ATOM 26 OP2 A A1092 51.495 92.624 133.772 1.00 43.10 O
ATOM 27 O5' A A1092 53.661 91.394 133.523 1.00 43.11 O
TER
ATOM 1 O3' C B1188 55.660 103.212 137.717 1.00 41.09 O
ATOM 2 P A B1189 56.025 103.948 136.339 1.00 44.72 P
ATOM 3 OP1 A B1189 55.972 102.951 135.240 1.00 44.96 O
ATOM 4 OP2 A B1189 57.281 104.693 136.590 1.00 44.80 O
ATOM 5 O5' A B1189 54.862 105.014 136.118 1.00 43.36 O
ATOM 6 C5' A B1189 55.099 106.203 135.341 1.00 43.39 C
ATOM 7 C4' A B1189 53.803 106.730 134.768 1.00 44.58 C
ATOM 8 O4' A B1189 53.227 105.719 133.901 1.00 46.10 O
ATOM 9 C3' A B1189 52.712 107.102 135.766 1.00 44.72 C
ATOM 10 O3' A B1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 11 C2' A B1189 51.878 105.823 135.834 1.00 46.18 C
ATOM 12 O2' A B1189 50.534 106.053 136.210 1.00 45.68 O
ATOM 13 C1' A B1189 51.958 105.328 134.390 1.00 47.06 C
ATOM 14 N9 A B1189 51.862 103.876 134.241 1.00 47.52 N
ATOM 15 C8 A B1189 52.850 102.959 134.492 1.00 48.91 C
ATOM 16 N7 A B1189 52.513 101.727 134.205 1.00 50.79 N
ATOM 17 C5 A B1189 51.209 101.835 133.748 1.00 48.39 C
ATOM 18 C6 A B1189 50.295 100.879 133.268 1.00 47.98 C
ATOM 19 N6 A B1189 50.563 99.575 133.167 1.00 46.27 N
ATOM 20 N1 A B1189 49.079 101.316 132.888 1.00 48.47 N
ATOM 21 C2 A B1189 48.810 102.626 132.987 1.00 49.60 C
ATOM 22 N3 A B1189 49.588 103.619 133.417 1.00 48.37 N
ATOM 23 C4 A B1189 50.788 103.151 133.785 1.00 47.66 C
ATOM 24 P A B1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 25 OP1 A B1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 26 OP2 A B1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 27 O5' A B1190 53.723 109.865 134.604 1.00 43.39 O
TER
Atoms:
OP1: (48.075,94.994,131.426)
OP2: (49.016,97.252,132.222)
C3': (52.811,93.871,131.477)
C1': (54.157,95.690,130.828)
C5': (50.849,94.667,130.102)
O4': (53.020,95.667,129.987)
C8: (52.868,97.489,132.096)
O2': (55.114,93.499,130.718)
C6: (55.297,99.338,133.829)
C5: (54.448,98.505,133.090)
C4: (55.038,97.462,132.400)
P: (49.012,96.134,131.243)
C4': (52.324,94.411,130.148)
C2': (54.265,94.319,131.500)
C2: (57.046,98.009,133.106)
N1: (56.620,99.058,133.816)
N3: (56.346,97.155,132.369)
N6: (54.874,100.384,134.536)
N7: (53.075,98.508,132.894)
N9: (54.016,96.823,131.742)
O5': (50.485,95.555,131.157)
O3': (52.653,92.461,131.499)
OP2: (49.016,97.252,132.222)
C3': (52.811,93.871,131.477)
C1': (54.157,95.690,130.828)
C5': (50.849,94.667,130.102)
O4': (53.020,95.667,129.987)
C8: (52.868,97.489,132.096)
O2': (55.114,93.499,130.718)
C6: (55.297,99.338,133.829)
C5: (54.448,98.505,133.090)
C4: (55.038,97.462,132.400)
P: (49.012,96.134,131.243)
C4': (52.324,94.411,130.148)
C2': (54.265,94.319,131.500)
C2: (57.046,98.009,133.106)
N1: (56.620,99.058,133.816)
N3: (56.346,97.155,132.369)
N6: (54.874,100.384,134.536)
N7: (53.075,98.508,132.894)
N9: (54.016,96.823,131.742)
O5': (50.485,95.555,131.157)
O3': (52.653,92.461,131.499)
OP1: (55.972,102.951,135.240)
OP2: (57.281,104.693,136.590)
C3': (52.712,107.102,135.766)
C1': (51.958,105.328,134.390)
C5': (55.099,106.203,135.341)
O4': (53.227,105.719,133.901)
C8: (52.850,102.959,134.492)
O2': (50.534,106.053,136.210)
C6: (50.295,100.879,133.268)
C5: (51.209,101.835,133.748)
C4: (50.788,103.151,133.785)
P: (56.025,103.948,136.339)
C4': (53.803,106.730,134.768)
C2': (51.878,105.823,135.834)
C2: (48.810,102.626,132.987)
N1: (49.079,101.316,132.888)
N3: (49.588,103.619,133.417)
N6: (50.563,99.575,133.167)
N7: (52.513,101.727,134.205)
N9: (51.862,103.876,134.241)
O5': (54.862,105.014,136.118)
O3': (51.948,108.186,135.239)
OP2: (57.281,104.693,136.590)
C3': (52.712,107.102,135.766)
C1': (51.958,105.328,134.390)
C5': (55.099,106.203,135.341)
O4': (53.227,105.719,133.901)
C8: (52.850,102.959,134.492)
O2': (50.534,106.053,136.210)
C6: (50.295,100.879,133.268)
C5: (51.209,101.835,133.748)
C4: (50.788,103.151,133.785)
P: (56.025,103.948,136.339)
C4': (53.803,106.730,134.768)
C2': (51.878,105.823,135.834)
C2: (48.810,102.626,132.987)
N1: (49.079,101.316,132.888)
N3: (49.588,103.619,133.417)
N6: (50.563,99.575,133.167)
N7: (52.513,101.727,134.205)
N9: (51.862,103.876,134.241)
O5': (54.862,105.014,136.118)
O3': (51.948,108.186,135.239)
Image (generated by PyMOL):