ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0368:0396

Extra

PDB:
ATOM 1 O3' G A 367 90.692 104.837 15.775 1.00 44.80 O
ATOM 2 P A A 368 92.238 104.601 16.150 1.00 47.18 P
ATOM 3 OP1 A A 368 92.759 105.875 16.695 1.00 50.06 O
ATOM 4 OP2 A A 368 92.900 103.979 14.977 1.00 47.15 O
ATOM 5 O5' A A 368 92.225 103.520 17.325 1.00 47.46 O
ATOM 6 C5' A A 368 91.668 103.839 18.618 1.00 44.69 C
ATOM 7 C4' A A 368 92.722 103.721 19.699 1.00 43.83 C
ATOM 8 O4' A A 368 93.089 102.321 19.839 1.00 43.42 O
ATOM 9 C3' A A 368 94.030 104.499 19.510 1.00 42.91 C
ATOM 10 O3' A A 368 94.491 105.041 20.768 1.00 42.26 O
ATOM 11 C2' A A 368 94.962 103.422 18.956 1.00 43.32 C
ATOM 12 O2' A A 368 96.350 103.660 19.142 1.00 43.56 O
ATOM 13 C1' A A 368 94.486 102.183 19.716 1.00 41.70 C
ATOM 14 N9 A A 368 94.753 100.941 18.997 1.00 41.23 N
ATOM 15 C8 A A 368 93.981 100.338 18.031 1.00 41.83 C
ATOM 16 N7 A A 368 94.511 99.244 17.541 1.00 41.58 N
ATOM 17 C5 A A 368 95.706 99.114 18.234 1.00 39.87 C
ATOM 18 C6 A A 368 96.738 98.163 18.168 1.00 40.00 C
ATOM 19 N6 A A 368 96.739 97.130 17.323 1.00 37.56 N
ATOM 20 N1 A A 368 97.787 98.317 19.004 1.00 39.88 N
ATOM 21 C2 A A 368 97.793 99.365 19.836 1.00 39.16 C
ATOM 22 N3 A A 368 96.889 100.329 19.981 1.00 37.88 N
ATOM 23 C4 A A 368 95.860 100.144 19.142 1.00 38.77 C
ATOM 24 P G A 369 93.714 106.303 21.399 1.00 43.58 P
ATOM 25 OP1 G A 369 92.382 105.790 21.825 1.00 44.38 O
ATOM 26 OP2 G A 369 93.787 107.429 20.432 1.00 44.44 O
ATOM 27 O5' G A 369 94.461 106.747 22.737 1.00 43.73 O
TER

ATOM 1 O3' A B 395 99.299 92.972 18.539 1.00 56.65 O
ATOM 2 P A B 396 99.316 93.389 16.976 1.00 55.58 P
ATOM 3 OP1 A B 396 100.558 92.807 16.400 1.00 56.21 O
ATOM 4 OP2 A B 396 99.058 94.845 16.835 1.00 54.61 O
ATOM 5 O5' A B 396 98.050 92.641 16.363 1.00 54.37 O
ATOM 6 C5' A B 396 97.956 91.203 16.342 1.00 49.93 C
ATOM 7 C4' A B 396 96.594 90.793 15.848 1.00 50.67 C
ATOM 8 O4' A B 396 95.600 91.343 16.750 1.00 50.61 O
ATOM 9 C3' A B 396 96.203 91.331 14.478 1.00 51.79 C
ATOM 10 O3' A B 396 96.697 90.475 13.441 1.00 55.31 O
ATOM 11 C2' A B 396 94.676 91.345 14.555 1.00 51.64 C
ATOM 12 O2' A B 396 94.072 90.083 14.335 1.00 51.58 O
ATOM 13 C1' A B 396 94.448 91.731 16.020 1.00 50.16 C
ATOM 14 N9 A B 396 94.224 93.160 16.236 1.00 47.28 N
ATOM 15 C8 A B 396 95.163 94.129 16.476 1.00 46.57 C
ATOM 16 N7 A B 396 94.658 95.329 16.623 1.00 46.41 N
ATOM 17 C5 A B 396 93.294 95.137 16.475 1.00 45.22 C
ATOM 18 C6 A B 396 92.209 96.024 16.531 1.00 45.55 C
ATOM 19 N6 A B 396 92.341 97.333 16.759 1.00 42.81 N
ATOM 20 N1 A B 396 90.968 95.514 16.346 1.00 45.33 N
ATOM 21 C2 A B 396 90.844 94.201 16.126 1.00 46.15 C
ATOM 22 N3 A B 396 91.793 93.264 16.052 1.00 48.24 N
ATOM 23 C4 A B 396 93.010 93.807 16.237 1.00 47.03 C
ATOM 24 P U B 397 97.202 91.094 12.035 1.00 57.32 P
ATOM 25 OP1 U B 397 97.703 89.942 11.248 1.00 59.98 O
ATOM 26 OP2 U B 397 98.101 92.255 12.279 1.00 56.94 O
ATOM 27 O5' U B 397 95.877 91.621 11.327 1.00 55.42 O
TER

Atoms:
OP1: (92.759,105.875,16.695)
OP2: (92.900,103.979,14.977)
C3': (94.030,104.499,19.510)
C1': (94.486,102.183,19.716)
C5': (91.668,103.839,18.618)
O4': (93.089,102.321,19.839)
C8: (93.981,100.338,18.031)
O2': (96.350,103.660,19.142)
C6: (96.738,98.163,18.168)
C5: (95.706,99.114,18.234)
C4: (95.860,100.144,19.142)
P: (92.238,104.601,16.150)
C4': (92.722,103.721,19.699)
C2': (94.962,103.422,18.956)
C2: (97.793,99.365,19.836)
N1: (97.787,98.317,19.004)
N3: (96.889,100.329,19.981)
N6: (96.739,97.130,17.323)
N7: (94.511,99.244,17.541)
N9: (94.753,100.941,18.997)
O5': (92.225,103.520,17.325)
O3': (94.491,105.041,20.768)
OP1: (100.558,92.807,16.400)
OP2: (99.058,94.845,16.835)
C3': (96.203,91.331,14.478)
C1': (94.448,91.731,16.020)
C5': (97.956,91.203,16.342)
O4': (95.600,91.343,16.750)
C8: (95.163,94.129,16.476)
O2': (94.072,90.083,14.335)
C6: (92.209,96.024,16.531)
C5: (93.294,95.137,16.475)
C4: (93.010,93.807,16.237)
P: (99.316,93.389,16.976)
C4': (96.594,90.793,15.848)
C2': (94.676,91.345,14.555)
C2: (90.844,94.201,16.126)
N1: (90.968,95.514,16.346)
N3: (91.793,93.264,16.052)
N6: (92.341,97.333,16.759)
N7: (94.658,95.329,16.623)
N9: (94.224,93.160,16.236)
O5': (98.050,92.641,16.363)
O3': (96.697,90.475,13.441)
Image (generated by PyMOL):
PyMOL image
show in jmol