Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0676:0686
Extra
PDB:
ATOM 1 O3' C A 675 43.328 73.375 40.534 1.00 60.55 O
ATOM 2 P A A 676 44.497 72.272 40.497 1.00 60.02 P
ATOM 3 OP1 A A 676 45.323 72.562 39.292 1.00 59.15 O
ATOM 4 OP2 A A 676 43.907 70.921 40.679 1.00 60.53 O
ATOM 5 O5' A A 676 45.363 72.586 41.794 1.00 59.15 O
ATOM 6 C5' A A 676 46.564 73.358 41.708 1.00 58.11 C
ATOM 7 C4' A A 676 47.628 72.744 42.574 1.00 57.43 C
ATOM 8 O4' A A 676 47.493 71.298 42.537 1.00 56.74 O
ATOM 9 C3' A A 676 49.053 73.050 42.120 1.00 58.06 C
ATOM 10 O3' A A 676 49.934 72.914 43.237 1.00 58.30 O
ATOM 11 C2' A A 676 49.328 71.862 41.211 1.00 58.74 C
ATOM 12 O2' A A 676 50.703 71.619 41.000 1.00 60.40 O
ATOM 13 C1' A A 676 48.686 70.744 42.035 1.00 58.14 C
ATOM 14 N9 A A 676 48.379 69.519 41.306 1.00 58.07 N
ATOM 15 C8 A A 676 47.316 69.249 40.479 1.00 58.40 C
ATOM 16 N7 A A 676 47.356 68.050 39.945 1.00 58.28 N
ATOM 17 C5 A A 676 48.518 67.495 40.461 1.00 56.72 C
ATOM 18 C6 A A 676 49.125 66.257 40.270 1.00 56.36 C
ATOM 19 N6 A A 676 48.639 65.325 39.452 1.00 59.39 N
ATOM 20 N1 A A 676 50.267 66.006 40.945 1.00 55.15 N
ATOM 21 C2 A A 676 50.761 66.956 41.745 1.00 54.63 C
ATOM 22 N3 A A 676 50.290 68.168 41.993 1.00 54.55 N
ATOM 23 C4 A A 676 49.150 68.379 41.312 1.00 57.02 C
ATOM 24 P G A 677 50.545 74.205 43.976 1.00 55.14 P
ATOM 25 OP1 G A 677 49.440 75.156 44.296 1.00 53.75 O
ATOM 26 OP2 G A 677 51.723 74.677 43.202 1.00 54.47 O
ATOM 27 O5' G A 677 51.064 73.559 45.334 1.00 53.53 O
TER
ATOM 1 O3' G B 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 2 P A B 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 3 OP1 A B 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 4 OP2 A B 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 5 O5' A B 686 49.396 62.535 39.661 1.00 62.19 O
ATOM 6 C5' A B 686 48.087 62.141 40.116 1.00 62.24 C
ATOM 7 C4' A B 686 48.031 62.167 41.627 1.00 63.55 C
ATOM 8 O4' A B 686 48.453 63.466 42.106 1.00 63.40 O
ATOM 9 C3' A B 686 46.641 62.035 42.226 1.00 64.02 C
ATOM 10 O3' A B 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 11 C2' A B 686 46.817 62.632 43.628 1.00 63.09 C
ATOM 12 O2' A B 686 47.253 61.697 44.591 1.00 63.43 O
ATOM 13 C1' A B 686 47.939 63.659 43.409 1.00 61.91 C
ATOM 14 N9 A B 686 47.608 65.078 43.602 1.00 60.01 N
ATOM 15 C8 A B 686 46.639 65.829 42.976 1.00 60.23 C
ATOM 16 N7 A B 686 46.580 67.073 43.394 1.00 58.81 N
ATOM 17 C5 A B 686 47.581 67.150 44.356 1.00 57.19 C
ATOM 18 C6 A B 686 48.024 68.199 45.176 1.00 54.79 C
ATOM 19 N6 A B 686 47.493 69.425 45.165 1.00 53.81 N
ATOM 20 N1 A B 686 49.043 67.945 46.018 1.00 52.12 N
ATOM 21 C2 A B 686 49.576 66.725 46.030 1.00 51.20 C
ATOM 22 N3 A B 686 49.251 65.659 45.317 1.00 54.09 N
ATOM 23 C4 A B 686 48.229 65.935 44.487 1.00 57.52 C
ATOM 24 P C B 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 25 OP1 C B 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 26 OP2 C B 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 27 O5' C B 687 43.924 60.817 43.187 1.00 68.76 O
TER
ATOM 2 P A A 676 44.497 72.272 40.497 1.00 60.02 P
ATOM 3 OP1 A A 676 45.323 72.562 39.292 1.00 59.15 O
ATOM 4 OP2 A A 676 43.907 70.921 40.679 1.00 60.53 O
ATOM 5 O5' A A 676 45.363 72.586 41.794 1.00 59.15 O
ATOM 6 C5' A A 676 46.564 73.358 41.708 1.00 58.11 C
ATOM 7 C4' A A 676 47.628 72.744 42.574 1.00 57.43 C
ATOM 8 O4' A A 676 47.493 71.298 42.537 1.00 56.74 O
ATOM 9 C3' A A 676 49.053 73.050 42.120 1.00 58.06 C
ATOM 10 O3' A A 676 49.934 72.914 43.237 1.00 58.30 O
ATOM 11 C2' A A 676 49.328 71.862 41.211 1.00 58.74 C
ATOM 12 O2' A A 676 50.703 71.619 41.000 1.00 60.40 O
ATOM 13 C1' A A 676 48.686 70.744 42.035 1.00 58.14 C
ATOM 14 N9 A A 676 48.379 69.519 41.306 1.00 58.07 N
ATOM 15 C8 A A 676 47.316 69.249 40.479 1.00 58.40 C
ATOM 16 N7 A A 676 47.356 68.050 39.945 1.00 58.28 N
ATOM 17 C5 A A 676 48.518 67.495 40.461 1.00 56.72 C
ATOM 18 C6 A A 676 49.125 66.257 40.270 1.00 56.36 C
ATOM 19 N6 A A 676 48.639 65.325 39.452 1.00 59.39 N
ATOM 20 N1 A A 676 50.267 66.006 40.945 1.00 55.15 N
ATOM 21 C2 A A 676 50.761 66.956 41.745 1.00 54.63 C
ATOM 22 N3 A A 676 50.290 68.168 41.993 1.00 54.55 N
ATOM 23 C4 A A 676 49.150 68.379 41.312 1.00 57.02 C
ATOM 24 P G A 677 50.545 74.205 43.976 1.00 55.14 P
ATOM 25 OP1 G A 677 49.440 75.156 44.296 1.00 53.75 O
ATOM 26 OP2 G A 677 51.723 74.677 43.202 1.00 54.47 O
ATOM 27 O5' G A 677 51.064 73.559 45.334 1.00 53.53 O
TER
ATOM 1 O3' G B 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 2 P A B 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 3 OP1 A B 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 4 OP2 A B 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 5 O5' A B 686 49.396 62.535 39.661 1.00 62.19 O
ATOM 6 C5' A B 686 48.087 62.141 40.116 1.00 62.24 C
ATOM 7 C4' A B 686 48.031 62.167 41.627 1.00 63.55 C
ATOM 8 O4' A B 686 48.453 63.466 42.106 1.00 63.40 O
ATOM 9 C3' A B 686 46.641 62.035 42.226 1.00 64.02 C
ATOM 10 O3' A B 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 11 C2' A B 686 46.817 62.632 43.628 1.00 63.09 C
ATOM 12 O2' A B 686 47.253 61.697 44.591 1.00 63.43 O
ATOM 13 C1' A B 686 47.939 63.659 43.409 1.00 61.91 C
ATOM 14 N9 A B 686 47.608 65.078 43.602 1.00 60.01 N
ATOM 15 C8 A B 686 46.639 65.829 42.976 1.00 60.23 C
ATOM 16 N7 A B 686 46.580 67.073 43.394 1.00 58.81 N
ATOM 17 C5 A B 686 47.581 67.150 44.356 1.00 57.19 C
ATOM 18 C6 A B 686 48.024 68.199 45.176 1.00 54.79 C
ATOM 19 N6 A B 686 47.493 69.425 45.165 1.00 53.81 N
ATOM 20 N1 A B 686 49.043 67.945 46.018 1.00 52.12 N
ATOM 21 C2 A B 686 49.576 66.725 46.030 1.00 51.20 C
ATOM 22 N3 A B 686 49.251 65.659 45.317 1.00 54.09 N
ATOM 23 C4 A B 686 48.229 65.935 44.487 1.00 57.52 C
ATOM 24 P C B 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 25 OP1 C B 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 26 OP2 C B 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 27 O5' C B 687 43.924 60.817 43.187 1.00 68.76 O
TER
Atoms:
OP1: (45.323,72.562,39.292)
OP2: (43.907,70.921,40.679)
C3': (49.053,73.050,42.120)
C1': (48.686,70.744,42.035)
C5': (46.564,73.358,41.708)
O4': (47.493,71.298,42.537)
C8: (47.316,69.249,40.479)
O2': (50.703,71.619,41.000)
C6: (49.125,66.257,40.270)
C5: (48.518,67.495,40.461)
C4: (49.150,68.379,41.312)
P: (44.497,72.272,40.497)
C4': (47.628,72.744,42.574)
C2': (49.328,71.862,41.211)
C2: (50.761,66.956,41.745)
N1: (50.267,66.006,40.945)
N3: (50.290,68.168,41.993)
N6: (48.639,65.325,39.452)
N7: (47.356,68.050,39.945)
N9: (48.379,69.519,41.306)
O5': (45.363,72.586,41.794)
O3': (49.934,72.914,43.237)
OP2: (43.907,70.921,40.679)
C3': (49.053,73.050,42.120)
C1': (48.686,70.744,42.035)
C5': (46.564,73.358,41.708)
O4': (47.493,71.298,42.537)
C8: (47.316,69.249,40.479)
O2': (50.703,71.619,41.000)
C6: (49.125,66.257,40.270)
C5: (48.518,67.495,40.461)
C4: (49.150,68.379,41.312)
P: (44.497,72.272,40.497)
C4': (47.628,72.744,42.574)
C2': (49.328,71.862,41.211)
C2: (50.761,66.956,41.745)
N1: (50.267,66.006,40.945)
N3: (50.290,68.168,41.993)
N6: (48.639,65.325,39.452)
N7: (47.356,68.050,39.945)
N9: (48.379,69.519,41.306)
O5': (45.363,72.586,41.794)
O3': (49.934,72.914,43.237)
OP1: (49.696,60.264,38.719)
OP2: (50.193,62.348,37.302)
C3': (46.641,62.035,42.226)
C1': (47.939,63.659,43.409)
C5': (48.087,62.141,40.116)
O4': (48.453,63.466,42.106)
C8: (46.639,65.829,42.976)
O2': (47.253,61.697,44.591)
C6: (48.024,68.199,45.176)
C5: (47.581,67.150,44.356)
C4: (48.229,65.935,44.487)
P: (50.213,61.653,38.617)
C4': (48.031,62.167,41.627)
C2': (46.817,62.632,43.628)
C2: (49.576,66.725,46.030)
N1: (49.043,67.945,46.018)
N3: (49.251,65.659,45.317)
N6: (47.493,69.425,45.165)
N7: (46.580,67.073,43.394)
N9: (47.608,65.078,43.602)
O5': (49.396,62.535,39.661)
O3': (46.270,60.656,42.278)
OP2: (50.193,62.348,37.302)
C3': (46.641,62.035,42.226)
C1': (47.939,63.659,43.409)
C5': (48.087,62.141,40.116)
O4': (48.453,63.466,42.106)
C8: (46.639,65.829,42.976)
O2': (47.253,61.697,44.591)
C6: (48.024,68.199,45.176)
C5: (47.581,67.150,44.356)
C4: (48.229,65.935,44.487)
P: (50.213,61.653,38.617)
C4': (48.031,62.167,41.627)
C2': (46.817,62.632,43.628)
C2: (49.576,66.725,46.030)
N1: (49.043,67.945,46.018)
N3: (49.251,65.659,45.317)
N6: (47.493,69.425,45.165)
N7: (46.580,67.073,43.394)
N9: (47.608,65.078,43.602)
O5': (49.396,62.535,39.661)
O3': (46.270,60.656,42.278)
Image (generated by PyMOL):