Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A500:A476
Extra
PDB:
ATOM 1 O3' G A 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 2 P A A 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 3 OP1 A A 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 4 OP2 A A 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 5 O5' A A 500 -11.203 156.376 225.727 1.00 0.40 O
ATOM 6 C5' A A 500 -11.951 156.210 226.927 1.00 0.40 C
ATOM 7 C4' A A 500 -13.378 155.809 226.643 1.00 0.40 C
ATOM 8 O4' A A 500 -14.048 156.847 225.897 1.00 0.40 O
ATOM 9 C3' A A 500 -13.547 154.583 225.796 1.00 0.40 C
ATOM 10 O3' A A 500 -13.461 153.415 226.546 1.00 0.40 O
ATOM 11 C2' A A 500 -14.896 154.791 225.159 1.00 0.40 C
ATOM 12 O2' A A 500 -15.922 154.515 226.082 1.00 0.40 O
ATOM 13 C1' A A 500 -14.867 156.283 224.912 1.00 0.40 C
ATOM 14 N9 A A 500 -14.282 156.622 223.609 1.00 0.37 N
ATOM 15 C8 A A 500 -12.981 156.996 223.410 1.00 0.37 C
ATOM 16 N7 A A 500 -12.721 157.265 222.157 1.00 0.37 N
ATOM 17 C5 A A 500 -13.927 157.071 221.494 1.00 0.37 C
ATOM 18 C6 A A 500 -14.302 157.199 220.153 1.00 0.37 C
ATOM 19 N6 A A 500 -13.469 157.566 219.172 1.00 0.37 N
ATOM 20 N1 A A 500 -15.578 156.931 219.840 1.00 0.37 N
ATOM 21 C2 A A 500 -16.416 156.563 220.802 1.00 0.37 C
ATOM 22 N3 A A 500 -16.179 156.397 222.092 1.00 0.37 N
ATOM 23 C4 A A 500 -14.903 156.680 222.381 1.00 0.37 C
ATOM 24 P A A 501 -12.647 152.213 225.952 1.00 0.74 P
ATOM 25 OP1 A A 501 -12.570 151.166 226.985 1.00 0.74 O
ATOM 26 OP2 A A 501 -11.389 152.784 225.403 1.00 0.74 O
ATOM 27 O5' A A 501 -13.596 151.741 224.792 1.00 0.74 O
TER
ATOM 1 O3' G B 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 2 P A B 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 3 OP1 A B 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 4 OP2 A B 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 5 O5' A B 476 -12.435 160.264 215.010 1.00 7.20 O
ATOM 6 C5' A B 476 -12.535 161.668 214.731 1.00 7.20 C
ATOM 7 C4' A B 476 -11.420 162.457 215.386 1.00 7.20 C
ATOM 8 O4' A B 476 -11.635 162.540 216.818 1.00 7.20 O
ATOM 9 C3' A B 476 -10.042 161.847 215.253 1.00 7.20 C
ATOM 10 O3' A B 476 -9.437 162.133 214.019 1.00 7.20 O
ATOM 11 C2' A B 476 -9.295 162.389 216.458 1.00 7.20 C
ATOM 12 O2' A B 476 -8.839 163.696 216.221 1.00 7.20 O
ATOM 13 C1' A B 476 -10.400 162.460 217.497 1.00 7.20 C
ATOM 14 N9 A B 476 -10.427 161.277 218.357 1.00 7.60 N
ATOM 15 C8 A B 476 -11.391 160.285 218.327 1.00 7.60 C
ATOM 16 N7 A B 476 -11.205 159.353 219.249 1.00 7.60 N
ATOM 17 C5 A B 476 -10.056 159.777 219.909 1.00 7.60 C
ATOM 18 C6 A B 476 -9.366 159.210 220.958 1.00 7.60 C
ATOM 19 N6 A B 476 -9.804 158.069 221.459 1.00 7.60 N
ATOM 20 N1 A B 476 -8.262 159.832 221.429 1.00 7.60 N
ATOM 21 C2 A B 476 -7.884 160.970 220.843 1.00 7.60 C
ATOM 22 N3 A B 476 -8.454 161.627 219.832 1.00 7.60 N
ATOM 23 C4 A B 476 -9.555 160.965 219.395 1.00 7.60 C
ATOM 24 P A B 477 -8.490 161.046 213.364 1.00 6.52 P
ATOM 25 OP1 A B 477 -8.053 161.576 212.055 1.00 6.52 O
ATOM 26 OP2 A B 477 -9.207 159.762 213.400 1.00 6.52 O
ATOM 27 O5' A B 477 -7.272 161.023 214.392 1.00 6.52 O
TER
ATOM 2 P A A 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 3 OP1 A A 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 4 OP2 A A 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 5 O5' A A 500 -11.203 156.376 225.727 1.00 0.40 O
ATOM 6 C5' A A 500 -11.951 156.210 226.927 1.00 0.40 C
ATOM 7 C4' A A 500 -13.378 155.809 226.643 1.00 0.40 C
ATOM 8 O4' A A 500 -14.048 156.847 225.897 1.00 0.40 O
ATOM 9 C3' A A 500 -13.547 154.583 225.796 1.00 0.40 C
ATOM 10 O3' A A 500 -13.461 153.415 226.546 1.00 0.40 O
ATOM 11 C2' A A 500 -14.896 154.791 225.159 1.00 0.40 C
ATOM 12 O2' A A 500 -15.922 154.515 226.082 1.00 0.40 O
ATOM 13 C1' A A 500 -14.867 156.283 224.912 1.00 0.40 C
ATOM 14 N9 A A 500 -14.282 156.622 223.609 1.00 0.37 N
ATOM 15 C8 A A 500 -12.981 156.996 223.410 1.00 0.37 C
ATOM 16 N7 A A 500 -12.721 157.265 222.157 1.00 0.37 N
ATOM 17 C5 A A 500 -13.927 157.071 221.494 1.00 0.37 C
ATOM 18 C6 A A 500 -14.302 157.199 220.153 1.00 0.37 C
ATOM 19 N6 A A 500 -13.469 157.566 219.172 1.00 0.37 N
ATOM 20 N1 A A 500 -15.578 156.931 219.840 1.00 0.37 N
ATOM 21 C2 A A 500 -16.416 156.563 220.802 1.00 0.37 C
ATOM 22 N3 A A 500 -16.179 156.397 222.092 1.00 0.37 N
ATOM 23 C4 A A 500 -14.903 156.680 222.381 1.00 0.37 C
ATOM 24 P A A 501 -12.647 152.213 225.952 1.00 0.74 P
ATOM 25 OP1 A A 501 -12.570 151.166 226.985 1.00 0.74 O
ATOM 26 OP2 A A 501 -11.389 152.784 225.403 1.00 0.74 O
ATOM 27 O5' A A 501 -13.596 151.741 224.792 1.00 0.74 O
TER
ATOM 1 O3' G B 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 2 P A B 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 3 OP1 A B 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 4 OP2 A B 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 5 O5' A B 476 -12.435 160.264 215.010 1.00 7.20 O
ATOM 6 C5' A B 476 -12.535 161.668 214.731 1.00 7.20 C
ATOM 7 C4' A B 476 -11.420 162.457 215.386 1.00 7.20 C
ATOM 8 O4' A B 476 -11.635 162.540 216.818 1.00 7.20 O
ATOM 9 C3' A B 476 -10.042 161.847 215.253 1.00 7.20 C
ATOM 10 O3' A B 476 -9.437 162.133 214.019 1.00 7.20 O
ATOM 11 C2' A B 476 -9.295 162.389 216.458 1.00 7.20 C
ATOM 12 O2' A B 476 -8.839 163.696 216.221 1.00 7.20 O
ATOM 13 C1' A B 476 -10.400 162.460 217.497 1.00 7.20 C
ATOM 14 N9 A B 476 -10.427 161.277 218.357 1.00 7.60 N
ATOM 15 C8 A B 476 -11.391 160.285 218.327 1.00 7.60 C
ATOM 16 N7 A B 476 -11.205 159.353 219.249 1.00 7.60 N
ATOM 17 C5 A B 476 -10.056 159.777 219.909 1.00 7.60 C
ATOM 18 C6 A B 476 -9.366 159.210 220.958 1.00 7.60 C
ATOM 19 N6 A B 476 -9.804 158.069 221.459 1.00 7.60 N
ATOM 20 N1 A B 476 -8.262 159.832 221.429 1.00 7.60 N
ATOM 21 C2 A B 476 -7.884 160.970 220.843 1.00 7.60 C
ATOM 22 N3 A B 476 -8.454 161.627 219.832 1.00 7.60 N
ATOM 23 C4 A B 476 -9.555 160.965 219.395 1.00 7.60 C
ATOM 24 P A B 477 -8.490 161.046 213.364 1.00 6.52 P
ATOM 25 OP1 A B 477 -8.053 161.576 212.055 1.00 6.52 O
ATOM 26 OP2 A B 477 -9.207 159.762 213.400 1.00 6.52 O
ATOM 27 O5' A B 477 -7.272 161.023 214.392 1.00 6.52 O
TER
Atoms:
OP1: (-9.259,157.974,226.047)
OP2: (-9.012,155.459,226.618)
C3': (-13.547,154.583,225.796)
C1': (-14.867,156.283,224.912)
C5': (-11.951,156.210,226.927)
O4': (-14.048,156.847,225.897)
C8: (-12.981,156.996,223.410)
O2': (-15.922,154.515,226.082)
C6: (-14.302,157.199,220.153)
C5: (-13.927,157.071,221.494)
C4: (-14.903,156.680,222.381)
P: (-9.614,156.548,225.771)
C4': (-13.378,155.809,226.643)
C2': (-14.896,154.791,225.159)
C2: (-16.416,156.563,220.802)
N1: (-15.578,156.931,219.840)
N3: (-16.179,156.397,222.092)
N6: (-13.469,157.566,219.172)
N7: (-12.721,157.265,222.157)
N9: (-14.282,156.622,223.609)
O5': (-11.203,156.376,225.727)
O3': (-13.461,153.415,226.546)
OP2: (-9.012,155.459,226.618)
C3': (-13.547,154.583,225.796)
C1': (-14.867,156.283,224.912)
C5': (-11.951,156.210,226.927)
O4': (-14.048,156.847,225.897)
C8: (-12.981,156.996,223.410)
O2': (-15.922,154.515,226.082)
C6: (-14.302,157.199,220.153)
C5: (-13.927,157.071,221.494)
C4: (-14.903,156.680,222.381)
P: (-9.614,156.548,225.771)
C4': (-13.378,155.809,226.643)
C2': (-14.896,154.791,225.159)
C2: (-16.416,156.563,220.802)
N1: (-15.578,156.931,219.840)
N3: (-16.179,156.397,222.092)
N6: (-13.469,157.566,219.172)
N7: (-12.721,157.265,222.157)
N9: (-14.282,156.622,223.609)
O5': (-11.203,156.376,225.727)
O3': (-13.461,153.415,226.546)
OP1: (-14.084,160.048,216.875)
OP2: (-14.704,159.352,214.485)
C3': (-10.042,161.847,215.253)
C1': (-10.400,162.460,217.497)
C5': (-12.535,161.668,214.731)
O4': (-11.635,162.540,216.818)
C8: (-11.391,160.285,218.327)
O2': (-8.839,163.696,216.221)
C6: (-9.366,159.210,220.958)
C5: (-10.056,159.777,219.909)
C4: (-9.555,160.965,219.395)
P: (-13.688,159.471,215.565)
C4': (-11.420,162.457,215.386)
C2': (-9.295,162.389,216.458)
C2: (-7.884,160.970,220.843)
N1: (-8.262,159.832,221.429)
N3: (-8.454,161.627,219.832)
N6: (-9.804,158.069,221.459)
N7: (-11.205,159.353,219.249)
N9: (-10.427,161.277,218.357)
O5': (-12.435,160.264,215.010)
O3': (-9.437,162.133,214.019)
OP2: (-14.704,159.352,214.485)
C3': (-10.042,161.847,215.253)
C1': (-10.400,162.460,217.497)
C5': (-12.535,161.668,214.731)
O4': (-11.635,162.540,216.818)
C8: (-11.391,160.285,218.327)
O2': (-8.839,163.696,216.221)
C6: (-9.366,159.210,220.958)
C5: (-10.056,159.777,219.909)
C4: (-9.555,160.965,219.395)
P: (-13.688,159.471,215.565)
C4': (-11.420,162.457,215.386)
C2': (-9.295,162.389,216.458)
C2: (-7.884,160.970,220.843)
N1: (-8.262,159.832,221.429)
N3: (-8.454,161.627,219.832)
N6: (-9.804,158.069,221.459)
N7: (-11.205,159.353,219.249)
N9: (-10.427,161.277,218.357)
O5': (-12.435,160.264,215.010)
O3': (-9.437,162.133,214.019)
Image (generated by PyMOL):