Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A654:A602
Extra
PDB:
ATOM 1 O3' A A 653 -108.576 -89.186 62.335 1.00 89.19 O
ATOM 2 P A A 654 -107.445 -88.898 63.432 1.00 12.10 P
ATOM 3 OP1 A A 654 -107.273 -90.161 64.206 1.00 12.10 O
ATOM 4 OP2 A A 654 -107.863 -87.648 64.175 1.00 12.10 O
ATOM 5 O5' A A 654 -106.118 -88.619 62.539 1.00 12.10 O
ATOM 6 C5' A A 654 -105.644 -87.279 62.275 1.00 12.10 C
ATOM 7 C4' A A 654 -104.145 -87.118 62.522 1.00 12.10 C
ATOM 8 O4' A A 654 -103.859 -87.438 63.909 1.00 12.10 O
ATOM 9 C3' A A 654 -103.237 -88.035 61.701 1.00 12.10 C
ATOM 10 O3' A A 654 -101.920 -87.472 61.611 1.00 12.10 O
ATOM 11 C2' A A 654 -103.150 -89.232 62.609 1.00 12.10 C
ATOM 12 O2' A A 654 -102.078 -90.088 62.315 1.00 12.10 O
ATOM 13 C1' A A 654 -102.962 -88.522 63.945 1.00 12.10 C
ATOM 14 N9 A A 654 -103.236 -89.325 65.136 1.00 12.00 N
ATOM 15 C8 A A 654 -104.290 -90.093 65.528 1.00 12.00 C
ATOM 16 N7 A A 654 -104.141 -90.643 66.721 1.00 12.00 N
ATOM 17 C5 A A 654 -102.913 -90.212 67.149 1.00 12.00 C
ATOM 18 C6 A A 654 -102.157 -90.424 68.317 1.00 12.00 C
ATOM 19 N6 A A 654 -102.485 -91.162 69.375 1.00 12.00 N
ATOM 20 N1 A A 654 -100.969 -89.823 68.405 1.00 12.00 N
ATOM 21 C2 A A 654 -100.570 -89.054 67.391 1.00 12.00 C
ATOM 22 N3 A A 654 -101.193 -88.774 66.246 1.00 12.00 N
ATOM 23 C4 A A 654 -102.368 -89.398 66.182 1.00 12.00 C
ATOM 24 P G A 655 -101.561 -86.266 60.599 1.00 0.01 P
ATOM 25 OP1 G A 655 -102.839 -85.671 60.155 1.00 0.01 O
ATOM 26 OP2 G A 655 -100.629 -86.796 59.577 1.00 0.01 O
ATOM 27 O5' G A 655 -100.767 -85.249 61.524 1.00 0.01 O
TER
ATOM 1 O3' A B 601 -99.424 -93.058 72.205 1.00 0.01 O
ATOM 2 P A B 602 -100.935 -93.590 72.224 1.00 0.01 P
ATOM 3 OP1 A B 602 -101.182 -94.088 73.587 1.00 0.01 O
ATOM 4 OP2 A B 602 -101.103 -94.519 71.090 1.00 0.01 O
ATOM 5 O5' A B 602 -101.775 -92.262 71.954 1.00 0.01 O
ATOM 6 C5' A B 602 -102.274 -91.477 73.035 1.00 0.01 C
ATOM 7 C4' A B 602 -101.596 -90.152 73.091 1.00 0.01 C
ATOM 8 O4' A B 602 -101.630 -89.562 71.769 1.00 0.01 O
ATOM 9 C3' A B 602 -102.209 -89.113 74.041 1.00 0.01 C
ATOM 10 O3' A B 602 -101.155 -88.394 74.710 1.00 0.01 O
ATOM 11 C2' A B 602 -102.934 -88.163 73.082 1.00 0.01 C
ATOM 12 O2' A B 602 -103.088 -86.848 73.577 1.00 0.01 O
ATOM 13 C1' A B 602 -101.979 -88.206 71.896 1.00 0.01 C
ATOM 14 N9 A B 602 -102.498 -87.727 70.609 1.00 0.01 N
ATOM 15 C8 A B 602 -103.558 -88.102 69.852 1.00 0.01 C
ATOM 16 N7 A B 602 -103.664 -87.469 68.710 1.00 0.01 N
ATOM 17 C5 A B 602 -102.576 -86.645 68.710 1.00 0.01 C
ATOM 18 C6 A B 602 -102.110 -85.719 67.774 1.00 0.01 C
ATOM 19 N6 A B 602 -102.758 -85.501 66.630 1.00 0.01 N
ATOM 20 N1 A B 602 -100.983 -85.013 68.055 1.00 0.01 N
ATOM 21 C2 A B 602 -100.383 -85.279 69.220 1.00 0.01 C
ATOM 22 N3 A B 602 -100.726 -86.154 70.174 1.00 0.01 N
ATOM 23 C4 A B 602 -101.848 -86.803 69.855 1.00 0.01 C
ATOM 24 P G B 603 -100.291 -89.098 75.871 1.00 0.01 P
ATOM 25 OP1 G B 603 -101.177 -90.065 76.539 1.00 0.01 O
ATOM 26 OP2 G B 603 -99.650 -88.037 76.663 1.00 0.01 O
ATOM 27 O5' G B 603 -99.192 -89.867 75.080 1.00 0.01 O
TER
ATOM 2 P A A 654 -107.445 -88.898 63.432 1.00 12.10 P
ATOM 3 OP1 A A 654 -107.273 -90.161 64.206 1.00 12.10 O
ATOM 4 OP2 A A 654 -107.863 -87.648 64.175 1.00 12.10 O
ATOM 5 O5' A A 654 -106.118 -88.619 62.539 1.00 12.10 O
ATOM 6 C5' A A 654 -105.644 -87.279 62.275 1.00 12.10 C
ATOM 7 C4' A A 654 -104.145 -87.118 62.522 1.00 12.10 C
ATOM 8 O4' A A 654 -103.859 -87.438 63.909 1.00 12.10 O
ATOM 9 C3' A A 654 -103.237 -88.035 61.701 1.00 12.10 C
ATOM 10 O3' A A 654 -101.920 -87.472 61.611 1.00 12.10 O
ATOM 11 C2' A A 654 -103.150 -89.232 62.609 1.00 12.10 C
ATOM 12 O2' A A 654 -102.078 -90.088 62.315 1.00 12.10 O
ATOM 13 C1' A A 654 -102.962 -88.522 63.945 1.00 12.10 C
ATOM 14 N9 A A 654 -103.236 -89.325 65.136 1.00 12.00 N
ATOM 15 C8 A A 654 -104.290 -90.093 65.528 1.00 12.00 C
ATOM 16 N7 A A 654 -104.141 -90.643 66.721 1.00 12.00 N
ATOM 17 C5 A A 654 -102.913 -90.212 67.149 1.00 12.00 C
ATOM 18 C6 A A 654 -102.157 -90.424 68.317 1.00 12.00 C
ATOM 19 N6 A A 654 -102.485 -91.162 69.375 1.00 12.00 N
ATOM 20 N1 A A 654 -100.969 -89.823 68.405 1.00 12.00 N
ATOM 21 C2 A A 654 -100.570 -89.054 67.391 1.00 12.00 C
ATOM 22 N3 A A 654 -101.193 -88.774 66.246 1.00 12.00 N
ATOM 23 C4 A A 654 -102.368 -89.398 66.182 1.00 12.00 C
ATOM 24 P G A 655 -101.561 -86.266 60.599 1.00 0.01 P
ATOM 25 OP1 G A 655 -102.839 -85.671 60.155 1.00 0.01 O
ATOM 26 OP2 G A 655 -100.629 -86.796 59.577 1.00 0.01 O
ATOM 27 O5' G A 655 -100.767 -85.249 61.524 1.00 0.01 O
TER
ATOM 1 O3' A B 601 -99.424 -93.058 72.205 1.00 0.01 O
ATOM 2 P A B 602 -100.935 -93.590 72.224 1.00 0.01 P
ATOM 3 OP1 A B 602 -101.182 -94.088 73.587 1.00 0.01 O
ATOM 4 OP2 A B 602 -101.103 -94.519 71.090 1.00 0.01 O
ATOM 5 O5' A B 602 -101.775 -92.262 71.954 1.00 0.01 O
ATOM 6 C5' A B 602 -102.274 -91.477 73.035 1.00 0.01 C
ATOM 7 C4' A B 602 -101.596 -90.152 73.091 1.00 0.01 C
ATOM 8 O4' A B 602 -101.630 -89.562 71.769 1.00 0.01 O
ATOM 9 C3' A B 602 -102.209 -89.113 74.041 1.00 0.01 C
ATOM 10 O3' A B 602 -101.155 -88.394 74.710 1.00 0.01 O
ATOM 11 C2' A B 602 -102.934 -88.163 73.082 1.00 0.01 C
ATOM 12 O2' A B 602 -103.088 -86.848 73.577 1.00 0.01 O
ATOM 13 C1' A B 602 -101.979 -88.206 71.896 1.00 0.01 C
ATOM 14 N9 A B 602 -102.498 -87.727 70.609 1.00 0.01 N
ATOM 15 C8 A B 602 -103.558 -88.102 69.852 1.00 0.01 C
ATOM 16 N7 A B 602 -103.664 -87.469 68.710 1.00 0.01 N
ATOM 17 C5 A B 602 -102.576 -86.645 68.710 1.00 0.01 C
ATOM 18 C6 A B 602 -102.110 -85.719 67.774 1.00 0.01 C
ATOM 19 N6 A B 602 -102.758 -85.501 66.630 1.00 0.01 N
ATOM 20 N1 A B 602 -100.983 -85.013 68.055 1.00 0.01 N
ATOM 21 C2 A B 602 -100.383 -85.279 69.220 1.00 0.01 C
ATOM 22 N3 A B 602 -100.726 -86.154 70.174 1.00 0.01 N
ATOM 23 C4 A B 602 -101.848 -86.803 69.855 1.00 0.01 C
ATOM 24 P G B 603 -100.291 -89.098 75.871 1.00 0.01 P
ATOM 25 OP1 G B 603 -101.177 -90.065 76.539 1.00 0.01 O
ATOM 26 OP2 G B 603 -99.650 -88.037 76.663 1.00 0.01 O
ATOM 27 O5' G B 603 -99.192 -89.867 75.080 1.00 0.01 O
TER
Atoms:
OP1: (-107.273,-90.161,64.206)
OP2: (-107.863,-87.648,64.175)
C3': (-103.237,-88.035,61.701)
C1': (-102.962,-88.522,63.945)
C5': (-105.644,-87.279,62.275)
O4': (-103.859,-87.438,63.909)
C8: (-104.290,-90.093,65.528)
O2': (-102.078,-90.088,62.315)
C6: (-102.157,-90.424,68.317)
C5: (-102.913,-90.212,67.149)
C4: (-102.368,-89.398,66.182)
P: (-107.445,-88.898,63.432)
C4': (-104.145,-87.118,62.522)
C2': (-103.150,-89.232,62.609)
C2: (-100.570,-89.054,67.391)
N1: (-100.969,-89.823,68.405)
N3: (-101.193,-88.774,66.246)
N6: (-102.485,-91.162,69.375)
N7: (-104.141,-90.643,66.721)
N9: (-103.236,-89.325,65.136)
O5': (-106.118,-88.619,62.539)
O3': (-101.920,-87.472,61.611)
OP2: (-107.863,-87.648,64.175)
C3': (-103.237,-88.035,61.701)
C1': (-102.962,-88.522,63.945)
C5': (-105.644,-87.279,62.275)
O4': (-103.859,-87.438,63.909)
C8: (-104.290,-90.093,65.528)
O2': (-102.078,-90.088,62.315)
C6: (-102.157,-90.424,68.317)
C5: (-102.913,-90.212,67.149)
C4: (-102.368,-89.398,66.182)
P: (-107.445,-88.898,63.432)
C4': (-104.145,-87.118,62.522)
C2': (-103.150,-89.232,62.609)
C2: (-100.570,-89.054,67.391)
N1: (-100.969,-89.823,68.405)
N3: (-101.193,-88.774,66.246)
N6: (-102.485,-91.162,69.375)
N7: (-104.141,-90.643,66.721)
N9: (-103.236,-89.325,65.136)
O5': (-106.118,-88.619,62.539)
O3': (-101.920,-87.472,61.611)
OP1: (-101.182,-94.088,73.587)
OP2: (-101.103,-94.519,71.090)
C3': (-102.209,-89.113,74.041)
C1': (-101.979,-88.206,71.896)
C5': (-102.274,-91.477,73.035)
O4': (-101.630,-89.562,71.769)
C8: (-103.558,-88.102,69.852)
O2': (-103.088,-86.848,73.577)
C6: (-102.110,-85.719,67.774)
C5: (-102.576,-86.645,68.710)
C4: (-101.848,-86.803,69.855)
P: (-100.935,-93.590,72.224)
C4': (-101.596,-90.152,73.091)
C2': (-102.934,-88.163,73.082)
C2: (-100.383,-85.279,69.220)
N1: (-100.983,-85.013,68.055)
N3: (-100.726,-86.154,70.174)
N6: (-102.758,-85.501,66.630)
N7: (-103.664,-87.469,68.710)
N9: (-102.498,-87.727,70.609)
O5': (-101.775,-92.262,71.954)
O3': (-101.155,-88.394,74.710)
OP2: (-101.103,-94.519,71.090)
C3': (-102.209,-89.113,74.041)
C1': (-101.979,-88.206,71.896)
C5': (-102.274,-91.477,73.035)
O4': (-101.630,-89.562,71.769)
C8: (-103.558,-88.102,69.852)
O2': (-103.088,-86.848,73.577)
C6: (-102.110,-85.719,67.774)
C5: (-102.576,-86.645,68.710)
C4: (-101.848,-86.803,69.855)
P: (-100.935,-93.590,72.224)
C4': (-101.596,-90.152,73.091)
C2': (-102.934,-88.163,73.082)
C2: (-100.383,-85.279,69.220)
N1: (-100.983,-85.013,68.055)
N3: (-100.726,-86.154,70.174)
N6: (-102.758,-85.501,66.630)
N7: (-103.664,-87.469,68.710)
N9: (-102.498,-87.727,70.609)
O5': (-101.775,-92.262,71.954)
O3': (-101.155,-88.394,74.710)
Image (generated by PyMOL):