ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GID:B122:B145

Extra

PDB:
ATOM 1 O3' U A 121 49.902 75.435 49.032 1.00 25.97 O
ATOM 2 P A A 122 48.559 76.129 48.528 1.00 26.78 P
ATOM 3 OP1 A A 122 48.809 77.589 48.602 1.00 26.06 O
ATOM 4 OP2 A A 122 47.356 75.546 49.152 1.00 25.58 O
ATOM 5 O5' A A 122 48.471 75.633 47.036 1.00 22.45 O
ATOM 6 C5' A A 122 49.635 75.434 46.289 1.00 26.01 C
ATOM 7 C4' A A 122 49.326 74.576 45.109 1.00 27.80 C
ATOM 8 O4' A A 122 49.032 73.246 45.562 1.00 26.07 O
ATOM 9 C3' A A 122 48.127 75.001 44.261 1.00 28.16 C
ATOM 10 O3' A A 122 48.554 75.212 42.925 1.00 37.51 O
ATOM 11 C2' A A 122 47.205 73.778 44.307 1.00 26.18 C
ATOM 12 O2' A A 122 46.589 73.505 43.069 1.00 36.05 O
ATOM 13 C1' A A 122 48.194 72.657 44.626 1.00 22.91 C
ATOM 14 N9 A A 122 47.573 71.505 45.247 1.00 20.42 N
ATOM 15 C8 A A 122 47.062 71.447 46.509 1.00 26.50 C
ATOM 16 N7 A A 122 46.531 70.290 46.814 1.00 28.57 N
ATOM 17 C5 A A 122 46.713 69.538 45.674 1.00 22.14 C
ATOM 18 C6 A A 122 46.370 68.236 45.359 1.00 26.42 C
ATOM 19 N6 A A 122 45.750 67.412 46.207 1.00 29.84 N
ATOM 20 N1 A A 122 46.688 67.781 44.126 1.00 27.92 N
ATOM 21 C2 A A 122 47.317 68.602 43.285 1.00 26.78 C
ATOM 22 N3 A A 122 47.700 69.864 43.474 1.00 25.60 N
ATOM 23 C4 A A 122 47.362 70.272 44.702 1.00 20.13 C
ATOM 24 P A A 123 48.479 76.672 42.261 1.00 37.77 P
ATOM 25 OP1 A A 123 49.132 77.704 43.094 1.00 28.84 O
ATOM 26 OP2 A A 123 47.041 76.810 41.892 1.00 39.11 O
ATOM 27 O5' A A 123 49.347 76.503 40.929 1.00 34.08 O
TER

ATOM 1 O3' U B 144 44.007 63.825 44.512 1.00 24.03 O
ATOM 2 P A B 145 45.065 63.498 45.666 1.00 24.96 P
ATOM 3 OP1 A B 145 44.832 62.169 46.248 1.00 27.01 O
ATOM 4 OP2 A B 145 45.210 64.681 46.532 1.00 28.03 O
ATOM 5 O5' A B 145 46.456 63.432 44.946 1.00 24.95 O
ATOM 6 C5' A B 145 46.613 62.719 43.764 1.00 24.28 C
ATOM 7 C4' A B 145 47.996 62.930 43.267 1.00 22.40 C
ATOM 8 O4' A B 145 48.354 64.296 43.562 1.00 19.34 O
ATOM 9 C3' A B 145 49.061 62.095 43.953 1.00 24.49 C
ATOM 10 O3' A B 145 49.799 61.599 42.853 1.00 35.99 O
ATOM 11 C2' A B 145 49.892 63.136 44.722 1.00 25.52 C
ATOM 12 O2' A B 145 51.269 62.819 44.797 1.00 44.97 O
ATOM 13 C1' A B 145 49.717 64.340 43.826 1.00 13.95 C
ATOM 14 N9 A B 145 50.018 65.672 44.323 1.00 12.59 N
ATOM 15 C8 A B 145 49.548 66.285 45.440 1.00 18.35 C
ATOM 16 N7 A B 145 49.940 67.536 45.560 1.00 21.47 N
ATOM 17 C5 A B 145 50.735 67.744 44.444 1.00 11.98 C
ATOM 18 C6 A B 145 51.446 68.847 43.989 1.00 14.00 C
ATOM 19 N6 A B 145 51.490 70.002 44.621 1.00 18.76 N
ATOM 20 N1 A B 145 52.143 68.725 42.849 1.00 12.73 N
ATOM 21 C2 A B 145 52.121 67.564 42.215 1.00 15.98 C
ATOM 22 N3 A B 145 51.497 66.445 42.542 1.00 18.90 N
ATOM 23 C4 A B 145 50.810 66.602 43.684 1.00 13.97 C
ATOM 24 P U B 146 50.440 60.131 42.876 1.00 40.56 P
ATOM 25 OP1 U B 146 49.853 59.288 41.799 1.00 45.50 O
ATOM 26 OP2 U B 146 50.486 59.602 44.256 1.00 44.19 O
ATOM 27 O5' U B 146 51.905 60.509 42.406 1.00 40.08 O
TER

Atoms:
OP1: (48.809,77.589,48.602)
OP2: (47.356,75.546,49.152)
C3': (48.127,75.001,44.261)
C1': (48.194,72.657,44.626)
C5': (49.635,75.434,46.289)
O4': (49.032,73.246,45.562)
C8: (47.062,71.447,46.509)
O2': (46.589,73.505,43.069)
C6: (46.370,68.236,45.359)
C5: (46.713,69.538,45.674)
C4: (47.362,70.272,44.702)
P: (48.559,76.129,48.528)
C4': (49.326,74.576,45.109)
C2': (47.205,73.778,44.307)
C2: (47.317,68.602,43.285)
N1: (46.688,67.781,44.126)
N3: (47.700,69.864,43.474)
N6: (45.750,67.412,46.207)
N7: (46.531,70.290,46.814)
N9: (47.573,71.505,45.247)
O5': (48.471,75.633,47.036)
O3': (48.554,75.212,42.925)
OP1: (44.832,62.169,46.248)
OP2: (45.210,64.681,46.532)
C3': (49.061,62.095,43.953)
C1': (49.717,64.340,43.826)
C5': (46.613,62.719,43.764)
O4': (48.354,64.296,43.562)
C8: (49.548,66.285,45.440)
O2': (51.269,62.819,44.797)
C6: (51.446,68.847,43.989)
C5: (50.735,67.744,44.444)
C4: (50.810,66.602,43.684)
P: (45.065,63.498,45.666)
C4': (47.996,62.930,43.267)
C2': (49.892,63.136,44.722)
C2: (52.121,67.564,42.215)
N1: (52.143,68.725,42.849)
N3: (51.497,66.445,42.542)
N6: (51.490,70.002,44.621)
N7: (49.940,67.536,45.560)
N9: (50.018,65.672,44.323)
O5': (46.456,63.432,44.946)
O3': (49.799,61.599,42.853)
Image (generated by PyMOL):
PyMOL image
show in jmol