Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NVI:E19:E18
Extra
PDB:
ATOM 1 O3' A A 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 2 P U A 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 3 OP1 U A 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 4 OP2 U A 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 5 O5' U A 19 -8.062 -3.352 3.092 1.00 70.80 O
ATOM 6 C5' U A 19 -9.120 -2.550 2.586 1.00 74.99 C
ATOM 7 C4' U A 19 -9.816 -3.205 1.417 1.00 76.57 C
ATOM 8 O4' U A 19 -8.835 -3.623 0.435 1.00 78.80 O
ATOM 9 C3' U A 19 -10.596 -4.471 1.725 1.00 79.82 C
ATOM 10 O3' U A 19 -11.888 -4.209 2.255 1.00 84.87 O
ATOM 11 C2' U A 19 -10.621 -5.186 0.379 1.00 77.74 C
ATOM 12 O2' U A 19 -11.615 -4.628 -0.456 1.00 80.72 O
ATOM 13 C1' U A 19 -9.258 -4.809 -0.199 1.00 73.52 C
ATOM 14 N1 U A 19 -8.226 -5.856 0.023 1.00 72.27 N
ATOM 15 C2 U A 19 -8.319 -7.076 -0.630 1.00 80.24 C
ATOM 16 O2 U A 19 -9.258 -7.349 -1.377 1.00 84.75 O
ATOM 17 N3 U A 19 -7.284 -7.961 -0.358 1.00 73.55 N
ATOM 18 C4 U A 19 -6.199 -7.746 0.480 1.00 71.30 C
ATOM 19 O4 U A 19 -5.329 -8.612 0.651 1.00 71.39 O
ATOM 20 C5 U A 19 -6.185 -6.470 1.104 1.00 69.22 C
ATOM 21 C6 U A 19 -7.159 -5.597 0.853 1.00 72.49 C
ATOM 22 P G A 20 -12.506 -5.149 3.409 1.00 84.39 P
ATOM 23 OP1 G A 20 -13.667 -4.436 3.979 1.00 83.37 O
ATOM 24 OP2 G A 20 -11.393 -5.531 4.312 1.00 85.99 O
ATOM 25 O5' G A 20 -13.002 -6.422 2.600 1.00 85.73 O
TER
ATOM 1 O3' G B 17 -1.099 -4.918 3.305 1.00 71.33 O
ATOM 2 P A B 18 -2.309 -5.065 4.341 1.00 72.22 P
ATOM 3 OP1 A B 18 -1.736 -4.862 5.698 1.00 80.27 O
ATOM 4 OP2 A B 18 -2.986 -6.328 4.041 1.00 66.92 O
ATOM 5 O5' A B 18 -3.273 -3.861 3.965 1.00 79.99 O
ATOM 6 C5' A B 18 -2.782 -2.626 3.478 1.00 78.60 C
ATOM 7 C4' A B 18 -3.860 -1.887 2.713 1.00 73.34 C
ATOM 8 O4' A B 18 -3.506 -1.850 1.309 1.00 74.15 O
ATOM 9 C3' A B 18 -5.256 -2.513 2.755 1.00 76.10 C
ATOM 10 O3' A B 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 11 C2' A B 18 -5.850 -2.133 1.400 1.00 78.18 C
ATOM 12 O2' A B 18 -6.368 -0.811 1.426 1.00 86.74 O
ATOM 13 C1' A B 18 -4.618 -2.136 0.507 1.00 71.76 C
ATOM 14 N9 A B 18 -4.393 -3.443 -0.128 1.00 73.82 N
ATOM 15 C8 A B 18 -3.394 -4.319 0.208 1.00 65.98 C
ATOM 16 N7 A B 18 -3.421 -5.395 -0.529 1.00 66.47 N
ATOM 17 C5 A B 18 -4.480 -5.227 -1.398 1.00 65.02 C
ATOM 18 C6 A B 18 -5.016 -6.038 -2.414 1.00 69.31 C
ATOM 19 N6 A B 18 -4.516 -7.226 -2.732 1.00 71.60 N
ATOM 20 N1 A B 18 -6.089 -5.590 -3.111 1.00 73.95 N
ATOM 21 C2 A B 18 -6.586 -4.383 -2.793 1.00 73.99 C
ATOM 22 N3 A B 18 -6.171 -3.526 -1.848 1.00 76.65 N
ATOM 23 C4 A B 18 -5.096 -4.012 -1.176 1.00 74.52 C
ATOM 24 P U B 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 25 OP1 U B 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 26 OP2 U B 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 27 O5' U B 19 -8.062 -3.352 3.092 1.00 70.80 O
TER
ATOM 2 P U A 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 3 OP1 U A 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 4 OP2 U A 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 5 O5' U A 19 -8.062 -3.352 3.092 1.00 70.80 O
ATOM 6 C5' U A 19 -9.120 -2.550 2.586 1.00 74.99 C
ATOM 7 C4' U A 19 -9.816 -3.205 1.417 1.00 76.57 C
ATOM 8 O4' U A 19 -8.835 -3.623 0.435 1.00 78.80 O
ATOM 9 C3' U A 19 -10.596 -4.471 1.725 1.00 79.82 C
ATOM 10 O3' U A 19 -11.888 -4.209 2.255 1.00 84.87 O
ATOM 11 C2' U A 19 -10.621 -5.186 0.379 1.00 77.74 C
ATOM 12 O2' U A 19 -11.615 -4.628 -0.456 1.00 80.72 O
ATOM 13 C1' U A 19 -9.258 -4.809 -0.199 1.00 73.52 C
ATOM 14 N1 U A 19 -8.226 -5.856 0.023 1.00 72.27 N
ATOM 15 C2 U A 19 -8.319 -7.076 -0.630 1.00 80.24 C
ATOM 16 O2 U A 19 -9.258 -7.349 -1.377 1.00 84.75 O
ATOM 17 N3 U A 19 -7.284 -7.961 -0.358 1.00 73.55 N
ATOM 18 C4 U A 19 -6.199 -7.746 0.480 1.00 71.30 C
ATOM 19 O4 U A 19 -5.329 -8.612 0.651 1.00 71.39 O
ATOM 20 C5 U A 19 -6.185 -6.470 1.104 1.00 69.22 C
ATOM 21 C6 U A 19 -7.159 -5.597 0.853 1.00 72.49 C
ATOM 22 P G A 20 -12.506 -5.149 3.409 1.00 84.39 P
ATOM 23 OP1 G A 20 -13.667 -4.436 3.979 1.00 83.37 O
ATOM 24 OP2 G A 20 -11.393 -5.531 4.312 1.00 85.99 O
ATOM 25 O5' G A 20 -13.002 -6.422 2.600 1.00 85.73 O
TER
ATOM 1 O3' G B 17 -1.099 -4.918 3.305 1.00 71.33 O
ATOM 2 P A B 18 -2.309 -5.065 4.341 1.00 72.22 P
ATOM 3 OP1 A B 18 -1.736 -4.862 5.698 1.00 80.27 O
ATOM 4 OP2 A B 18 -2.986 -6.328 4.041 1.00 66.92 O
ATOM 5 O5' A B 18 -3.273 -3.861 3.965 1.00 79.99 O
ATOM 6 C5' A B 18 -2.782 -2.626 3.478 1.00 78.60 C
ATOM 7 C4' A B 18 -3.860 -1.887 2.713 1.00 73.34 C
ATOM 8 O4' A B 18 -3.506 -1.850 1.309 1.00 74.15 O
ATOM 9 C3' A B 18 -5.256 -2.513 2.755 1.00 76.10 C
ATOM 10 O3' A B 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 11 C2' A B 18 -5.850 -2.133 1.400 1.00 78.18 C
ATOM 12 O2' A B 18 -6.368 -0.811 1.426 1.00 86.74 O
ATOM 13 C1' A B 18 -4.618 -2.136 0.507 1.00 71.76 C
ATOM 14 N9 A B 18 -4.393 -3.443 -0.128 1.00 73.82 N
ATOM 15 C8 A B 18 -3.394 -4.319 0.208 1.00 65.98 C
ATOM 16 N7 A B 18 -3.421 -5.395 -0.529 1.00 66.47 N
ATOM 17 C5 A B 18 -4.480 -5.227 -1.398 1.00 65.02 C
ATOM 18 C6 A B 18 -5.016 -6.038 -2.414 1.00 69.31 C
ATOM 19 N6 A B 18 -4.516 -7.226 -2.732 1.00 71.60 N
ATOM 20 N1 A B 18 -6.089 -5.590 -3.111 1.00 73.95 N
ATOM 21 C2 A B 18 -6.586 -4.383 -2.793 1.00 73.99 C
ATOM 22 N3 A B 18 -6.171 -3.526 -1.848 1.00 76.65 N
ATOM 23 C4 A B 18 -5.096 -4.012 -1.176 1.00 74.52 C
ATOM 24 P U B 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 25 OP1 U B 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 26 OP2 U B 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 27 O5' U B 19 -8.062 -3.352 3.092 1.00 70.80 O
TER
Atoms:
C4: (-6.199,-7.746,0.480)
N3: (-7.284,-7.961,-0.358)
OP1: (-8.157,-2.001,5.211)
OP2: (-6.751,-4.117,5.097)
C2: (-8.319,-7.076,-0.630)
C1': (-9.258,-4.809,-0.199)
C3': (-10.596,-4.471,1.725)
O5': (-8.062,-3.352,3.092)
O4': (-8.835,-3.623,0.435)
C5': (-9.120,-2.550,2.586)
P: (-7.297,-2.927,4.423)
C4': (-9.816,-3.205,1.417)
C2': (-10.621,-5.186,0.379)
O2': (-11.615,-4.628,-0.456)
N1: (-8.226,-5.856,0.023)
O4: (-5.329,-8.612,0.651)
O2: (-9.258,-7.349,-1.377)
C6: (-7.159,-5.597,0.853)
C5: (-6.185,-6.470,1.104)
O3': (-11.888,-4.209,2.255)
N3: (-7.284,-7.961,-0.358)
OP1: (-8.157,-2.001,5.211)
OP2: (-6.751,-4.117,5.097)
C2: (-8.319,-7.076,-0.630)
C1': (-9.258,-4.809,-0.199)
C3': (-10.596,-4.471,1.725)
O5': (-8.062,-3.352,3.092)
O4': (-8.835,-3.623,0.435)
C5': (-9.120,-2.550,2.586)
P: (-7.297,-2.927,4.423)
C4': (-9.816,-3.205,1.417)
C2': (-10.621,-5.186,0.379)
O2': (-11.615,-4.628,-0.456)
N1: (-8.226,-5.856,0.023)
O4: (-5.329,-8.612,0.651)
O2: (-9.258,-7.349,-1.377)
C6: (-7.159,-5.597,0.853)
C5: (-6.185,-6.470,1.104)
O3': (-11.888,-4.209,2.255)
OP1: (-1.736,-4.862,5.698)
OP2: (-2.986,-6.328,4.041)
C3': (-5.256,-2.513,2.755)
C1': (-4.618,-2.136,0.507)
C5': (-2.782,-2.626,3.478)
O4': (-3.506,-1.850,1.309)
C8: (-3.394,-4.319,0.208)
O2': (-6.368,-0.811,1.426)
C6: (-5.016,-6.038,-2.414)
C5: (-4.480,-5.227,-1.398)
C4: (-5.096,-4.012,-1.176)
P: (-2.309,-5.065,4.341)
C4': (-3.860,-1.887,2.713)
C2': (-5.850,-2.133,1.400)
C2: (-6.586,-4.383,-2.793)
N1: (-6.089,-5.590,-3.111)
N3: (-6.171,-3.526,-1.848)
N6: (-4.516,-7.226,-2.732)
N7: (-3.421,-5.395,-0.529)
N9: (-4.393,-3.443,-0.128)
O5': (-3.273,-3.861,3.965)
O3': (-6.034,-2.067,3.873)
OP2: (-2.986,-6.328,4.041)
C3': (-5.256,-2.513,2.755)
C1': (-4.618,-2.136,0.507)
C5': (-2.782,-2.626,3.478)
O4': (-3.506,-1.850,1.309)
C8: (-3.394,-4.319,0.208)
O2': (-6.368,-0.811,1.426)
C6: (-5.016,-6.038,-2.414)
C5: (-4.480,-5.227,-1.398)
C4: (-5.096,-4.012,-1.176)
P: (-2.309,-5.065,4.341)
C4': (-3.860,-1.887,2.713)
C2': (-5.850,-2.133,1.400)
C2: (-6.586,-4.383,-2.793)
N1: (-6.089,-5.590,-3.111)
N3: (-6.171,-3.526,-1.848)
N6: (-4.516,-7.226,-2.732)
N7: (-3.421,-5.395,-0.529)
N9: (-4.393,-3.443,-0.128)
O5': (-3.273,-3.861,3.965)
O3': (-6.034,-2.067,3.873)
Image (generated by PyMOL):