ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A861:A880

Extra

PDB:
ATOM 1 O3' G A 860 -29.297 92.846 100.278 1.00 14.60 O
ATOM 2 P A A 861 -28.050 93.750 100.749 1.00 32.10 P
ATOM 3 OP1 A A 861 -26.950 92.860 101.220 1.00 26.66 O
ATOM 4 OP2 A A 861 -28.575 94.797 101.648 1.00 25.45 O
ATOM 5 O5' A A 861 -27.566 94.442 99.406 1.00 39.91 O
ATOM 6 C5' A A 861 -26.743 95.595 99.456 1.00 41.37 C
ATOM 7 C4' A A 861 -25.721 95.537 98.363 1.00 43.19 C
ATOM 8 O4' A A 861 -24.844 94.405 98.587 1.00 44.63 O
ATOM 9 C3' A A 861 -26.277 95.386 96.955 1.00 44.00 C
ATOM 10 O3' A A 861 -25.406 96.104 96.096 1.00 45.26 O
ATOM 11 C2' A A 861 -26.101 93.901 96.676 1.00 44.37 C
ATOM 12 O2' A A 861 -25.933 93.637 95.300 1.00 45.90 O
ATOM 13 C1' A A 861 -24.807 93.610 97.432 1.00 44.36 C
ATOM 14 N9 A A 861 -24.644 92.218 97.831 1.00 34.42 N
ATOM 15 C8 A A 861 -25.393 91.472 98.709 1.00 34.87 C
ATOM 16 N7 A A 861 -25.000 90.225 98.807 1.00 34.83 N
ATOM 17 C5 A A 861 -23.916 90.149 97.944 1.00 34.49 C
ATOM 18 C6 A A 861 -23.073 89.092 97.578 1.00 35.28 C
ATOM 19 N6 A A 861 -23.191 87.848 98.046 1.00 36.50 N
ATOM 20 N1 A A 861 -22.091 89.354 96.693 1.00 34.90 N
ATOM 21 C2 A A 861 -21.979 90.596 96.207 1.00 33.61 C
ATOM 22 N3 A A 861 -22.714 91.668 96.466 1.00 32.70 N
ATOM 23 C4 A A 861 -23.678 91.373 97.350 1.00 34.00 C
ATOM 24 P G A 862 -25.994 97.139 95.021 1.00 36.86 P
ATOM 25 OP1 G A 862 -26.559 98.294 95.783 1.00 21.76 O
ATOM 26 OP2 G A 862 -26.869 96.382 94.068 1.00 22.96 O
ATOM 27 O5' G A 862 -24.664 97.576 94.250 1.00 34.52 O
TER

ATOM 1 O3' A B 879 -19.180 84.727 98.133 1.00 26.26 O
ATOM 2 P A B 880 -20.510 84.114 97.488 1.00 49.88 P
ATOM 3 OP1 A B 880 -20.075 82.998 96.602 1.00 54.24 O
ATOM 4 OP2 A B 880 -21.349 85.211 96.931 1.00 49.88 O
ATOM 5 O5' A B 880 -21.270 83.501 98.738 1.00 35.62 O
ATOM 6 C5' A B 880 -20.626 82.544 99.582 1.00 33.77 C
ATOM 7 C4' A B 880 -21.333 82.479 100.904 1.00 34.45 C
ATOM 8 O4' A B 880 -21.240 83.769 101.555 1.00 34.62 O
ATOM 9 C3' A B 880 -22.823 82.208 100.812 1.00 35.69 C
ATOM 10 O3' A B 880 -23.062 80.813 100.724 1.00 37.71 O
ATOM 11 C2' A B 880 -23.370 82.833 102.093 1.00 35.26 C
ATOM 12 O2' A B 880 -23.281 81.989 103.221 1.00 34.88 O
ATOM 13 C1' A B 880 -22.428 84.022 102.292 1.00 33.93 C
ATOM 14 N9 A B 880 -22.984 85.307 101.862 1.00 22.66 N
ATOM 15 C8 A B 880 -22.588 86.088 100.809 1.00 23.17 C
ATOM 16 N7 A B 880 -23.280 87.191 100.681 1.00 21.51 N
ATOM 17 C5 A B 880 -24.200 87.132 101.716 1.00 19.70 C
ATOM 18 C6 A B 880 -25.232 88.000 102.118 1.00 20.18 C
ATOM 19 N6 A B 880 -25.526 89.154 101.505 1.00 22.60 N
ATOM 20 N1 A B 880 -25.967 87.640 103.187 1.00 18.87 N
ATOM 21 C2 A B 880 -25.677 86.493 103.806 1.00 19.10 C
ATOM 22 N3 A B 880 -24.736 85.596 103.526 1.00 21.09 N
ATOM 23 C4 A B 880 -24.026 85.979 102.454 1.00 20.55 C
ATOM 24 P A B 881 -24.421 80.279 100.062 1.00 43.87 P
ATOM 25 OP1 A B 881 -24.179 78.831 99.841 1.00 41.51 O
ATOM 26 OP2 A B 881 -24.825 81.136 98.925 1.00 38.04 O
ATOM 27 O5' A B 881 -25.503 80.481 101.211 1.00 23.47 O
TER

Atoms:
OP1: (-26.950,92.860,101.220)
OP2: (-28.575,94.797,101.648)
C3': (-26.277,95.386,96.955)
C1': (-24.807,93.610,97.432)
C5': (-26.743,95.595,99.456)
O4': (-24.844,94.405,98.587)
C8: (-25.393,91.472,98.709)
O2': (-25.933,93.637,95.300)
C6: (-23.073,89.092,97.578)
C5: (-23.916,90.149,97.944)
C4: (-23.678,91.373,97.350)
P: (-28.050,93.750,100.749)
C4': (-25.721,95.537,98.363)
C2': (-26.101,93.901,96.676)
C2: (-21.979,90.596,96.207)
N1: (-22.091,89.354,96.693)
N3: (-22.714,91.668,96.466)
N6: (-23.191,87.848,98.046)
N7: (-25.000,90.225,98.807)
N9: (-24.644,92.218,97.831)
O5': (-27.566,94.442,99.406)
O3': (-25.406,96.104,96.096)
OP1: (-20.075,82.998,96.602)
OP2: (-21.349,85.211,96.931)
C3': (-22.823,82.208,100.812)
C1': (-22.428,84.022,102.292)
C5': (-20.626,82.544,99.582)
O4': (-21.240,83.769,101.555)
C8: (-22.588,86.088,100.809)
O2': (-23.281,81.989,103.221)
C6: (-25.232,88.000,102.118)
C5: (-24.200,87.132,101.716)
C4: (-24.026,85.979,102.454)
P: (-20.510,84.114,97.488)
C4': (-21.333,82.479,100.904)
C2': (-23.370,82.833,102.093)
C2: (-25.677,86.493,103.806)
N1: (-25.967,87.640,103.187)
N3: (-24.736,85.596,103.526)
N6: (-25.526,89.154,101.505)
N7: (-23.280,87.191,100.681)
N9: (-22.984,85.307,101.862)
O5': (-21.270,83.501,98.738)
O3': (-23.062,80.813,100.724)
Image (generated by PyMOL):
PyMOL image
show in jmol