Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A497:A545
Extra
PDB:
ATOM 1 O3' A A 496 -56.170 34.932 87.103 1.00 25.32 O
ATOM 2 P A A 497 -56.535 35.569 85.682 1.00 20.94 P
ATOM 3 OP1 A A 497 -58.029 35.607 85.600 1.00 20.94 O
ATOM 4 OP2 A A 497 -55.770 34.809 84.660 1.00 20.94 O
ATOM 5 O5' A A 497 -55.948 37.065 85.786 1.00 20.94 O
ATOM 6 C5' A A 497 -56.660 38.098 86.480 1.00 20.94 C
ATOM 7 C4' A A 497 -56.193 39.487 86.090 1.00 20.94 C
ATOM 8 O4' A A 497 -54.738 39.549 86.143 1.00 20.94 O
ATOM 9 C3' A A 497 -56.581 39.937 84.681 1.00 20.94 C
ATOM 10 O3' A A 497 -56.791 41.352 84.656 1.00 20.94 O
ATOM 11 C2' A A 497 -55.315 39.643 83.897 1.00 20.94 C
ATOM 12 O2' A A 497 -55.188 40.372 82.694 1.00 20.94 O
ATOM 13 C1' A A 497 -54.264 40.054 84.914 1.00 20.94 C
ATOM 14 N9 A A 497 -52.923 39.525 84.650 1.00 20.61 N
ATOM 15 C8 A A 497 -52.523 38.253 84.314 1.00 20.61 C
ATOM 16 N7 A A 497 -51.224 38.128 84.129 1.00 20.61 N
ATOM 17 C5 A A 497 -50.719 39.405 84.330 1.00 20.61 C
ATOM 18 C6 A A 497 -49.406 39.943 84.278 1.00 20.61 C
ATOM 19 N6 A A 497 -48.296 39.271 83.987 1.00 20.61 N
ATOM 20 N1 A A 497 -49.281 41.252 84.553 1.00 20.61 N
ATOM 21 C2 A A 497 -50.390 41.955 84.845 1.00 20.61 C
ATOM 22 N3 A A 497 -51.669 41.575 84.927 1.00 20.61 N
ATOM 23 C4 A A 497 -51.769 40.271 84.652 1.00 20.61 C
ATOM 24 P G A 498 -57.926 42.060 85.546 1.00 16.37 P
ATOM 25 OP1 G A 498 -58.285 41.114 86.640 1.00 16.37 O
ATOM 26 OP2 G A 498 -58.996 42.529 84.617 1.00 16.37 O
ATOM 27 O5' G A 498 -57.149 43.310 86.148 1.00 16.37 O
TER
ATOM 1 O3' A B 544 -44.717 41.662 83.189 1.00 4.44 O
ATOM 2 P A B 545 -44.134 40.191 82.913 1.00 10.92 P
ATOM 3 OP1 A B 545 -42.820 40.119 83.560 1.00 10.92 O
ATOM 4 OP2 A B 545 -44.234 39.950 81.453 1.00 10.92 O
ATOM 5 O5' A B 545 -45.152 39.257 83.702 1.00 10.92 O
ATOM 6 C5' A B 545 -44.844 38.801 85.022 1.00 10.92 C
ATOM 7 C4' A B 545 -45.045 39.881 86.049 1.00 10.92 C
ATOM 8 O4' A B 545 -46.443 40.267 86.064 1.00 10.92 O
ATOM 9 C3' A B 545 -44.696 39.493 87.487 1.00 10.92 C
ATOM 10 O3' A B 545 -44.103 40.592 88.157 1.00 10.92 O
ATOM 11 C2' A B 545 -46.047 39.242 88.105 1.00 10.92 C
ATOM 12 O2' A B 545 -46.083 39.431 89.504 1.00 10.92 O
ATOM 13 C1' A B 545 -46.893 40.274 87.386 1.00 10.92 C
ATOM 14 N9 A B 545 -48.305 39.967 87.398 1.00 11.67 N
ATOM 15 C8 A B 545 -48.854 38.797 87.007 1.00 11.67 C
ATOM 16 N7 A B 545 -50.152 38.788 87.178 1.00 11.67 N
ATOM 17 C5 A B 545 -50.480 40.030 87.734 1.00 11.67 C
ATOM 18 C6 A B 545 -51.707 40.646 88.153 1.00 11.67 C
ATOM 19 N6 A B 545 -52.924 40.089 88.079 1.00 11.67 N
ATOM 20 N1 A B 545 -51.651 41.896 88.678 1.00 11.67 N
ATOM 21 C2 A B 545 -50.446 42.482 88.765 1.00 11.67 C
ATOM 22 N3 A B 545 -49.247 42.001 88.399 1.00 11.67 N
ATOM 23 C4 A B 545 -49.321 40.759 87.880 1.00 11.67 C
ATOM 24 P G B 546 -42.603 41.032 87.817 1.00 8.80 P
ATOM 25 OP1 G B 546 -41.880 39.810 87.378 1.00 8.80 O
ATOM 26 OP2 G B 546 -42.080 41.787 88.990 1.00 8.80 O
ATOM 27 O5' G B 546 -42.814 42.022 86.573 1.00 8.80 O
TER
ATOM 2 P A A 497 -56.535 35.569 85.682 1.00 20.94 P
ATOM 3 OP1 A A 497 -58.029 35.607 85.600 1.00 20.94 O
ATOM 4 OP2 A A 497 -55.770 34.809 84.660 1.00 20.94 O
ATOM 5 O5' A A 497 -55.948 37.065 85.786 1.00 20.94 O
ATOM 6 C5' A A 497 -56.660 38.098 86.480 1.00 20.94 C
ATOM 7 C4' A A 497 -56.193 39.487 86.090 1.00 20.94 C
ATOM 8 O4' A A 497 -54.738 39.549 86.143 1.00 20.94 O
ATOM 9 C3' A A 497 -56.581 39.937 84.681 1.00 20.94 C
ATOM 10 O3' A A 497 -56.791 41.352 84.656 1.00 20.94 O
ATOM 11 C2' A A 497 -55.315 39.643 83.897 1.00 20.94 C
ATOM 12 O2' A A 497 -55.188 40.372 82.694 1.00 20.94 O
ATOM 13 C1' A A 497 -54.264 40.054 84.914 1.00 20.94 C
ATOM 14 N9 A A 497 -52.923 39.525 84.650 1.00 20.61 N
ATOM 15 C8 A A 497 -52.523 38.253 84.314 1.00 20.61 C
ATOM 16 N7 A A 497 -51.224 38.128 84.129 1.00 20.61 N
ATOM 17 C5 A A 497 -50.719 39.405 84.330 1.00 20.61 C
ATOM 18 C6 A A 497 -49.406 39.943 84.278 1.00 20.61 C
ATOM 19 N6 A A 497 -48.296 39.271 83.987 1.00 20.61 N
ATOM 20 N1 A A 497 -49.281 41.252 84.553 1.00 20.61 N
ATOM 21 C2 A A 497 -50.390 41.955 84.845 1.00 20.61 C
ATOM 22 N3 A A 497 -51.669 41.575 84.927 1.00 20.61 N
ATOM 23 C4 A A 497 -51.769 40.271 84.652 1.00 20.61 C
ATOM 24 P G A 498 -57.926 42.060 85.546 1.00 16.37 P
ATOM 25 OP1 G A 498 -58.285 41.114 86.640 1.00 16.37 O
ATOM 26 OP2 G A 498 -58.996 42.529 84.617 1.00 16.37 O
ATOM 27 O5' G A 498 -57.149 43.310 86.148 1.00 16.37 O
TER
ATOM 1 O3' A B 544 -44.717 41.662 83.189 1.00 4.44 O
ATOM 2 P A B 545 -44.134 40.191 82.913 1.00 10.92 P
ATOM 3 OP1 A B 545 -42.820 40.119 83.560 1.00 10.92 O
ATOM 4 OP2 A B 545 -44.234 39.950 81.453 1.00 10.92 O
ATOM 5 O5' A B 545 -45.152 39.257 83.702 1.00 10.92 O
ATOM 6 C5' A B 545 -44.844 38.801 85.022 1.00 10.92 C
ATOM 7 C4' A B 545 -45.045 39.881 86.049 1.00 10.92 C
ATOM 8 O4' A B 545 -46.443 40.267 86.064 1.00 10.92 O
ATOM 9 C3' A B 545 -44.696 39.493 87.487 1.00 10.92 C
ATOM 10 O3' A B 545 -44.103 40.592 88.157 1.00 10.92 O
ATOM 11 C2' A B 545 -46.047 39.242 88.105 1.00 10.92 C
ATOM 12 O2' A B 545 -46.083 39.431 89.504 1.00 10.92 O
ATOM 13 C1' A B 545 -46.893 40.274 87.386 1.00 10.92 C
ATOM 14 N9 A B 545 -48.305 39.967 87.398 1.00 11.67 N
ATOM 15 C8 A B 545 -48.854 38.797 87.007 1.00 11.67 C
ATOM 16 N7 A B 545 -50.152 38.788 87.178 1.00 11.67 N
ATOM 17 C5 A B 545 -50.480 40.030 87.734 1.00 11.67 C
ATOM 18 C6 A B 545 -51.707 40.646 88.153 1.00 11.67 C
ATOM 19 N6 A B 545 -52.924 40.089 88.079 1.00 11.67 N
ATOM 20 N1 A B 545 -51.651 41.896 88.678 1.00 11.67 N
ATOM 21 C2 A B 545 -50.446 42.482 88.765 1.00 11.67 C
ATOM 22 N3 A B 545 -49.247 42.001 88.399 1.00 11.67 N
ATOM 23 C4 A B 545 -49.321 40.759 87.880 1.00 11.67 C
ATOM 24 P G B 546 -42.603 41.032 87.817 1.00 8.80 P
ATOM 25 OP1 G B 546 -41.880 39.810 87.378 1.00 8.80 O
ATOM 26 OP2 G B 546 -42.080 41.787 88.990 1.00 8.80 O
ATOM 27 O5' G B 546 -42.814 42.022 86.573 1.00 8.80 O
TER
Atoms:
OP1: (-58.029,35.607,85.600)
OP2: (-55.770,34.809,84.660)
C3': (-56.581,39.937,84.681)
C1': (-54.264,40.054,84.914)
C5': (-56.660,38.098,86.480)
O4': (-54.738,39.549,86.143)
C8: (-52.523,38.253,84.314)
O2': (-55.188,40.372,82.694)
C6: (-49.406,39.943,84.278)
C5: (-50.719,39.405,84.330)
C4: (-51.769,40.271,84.652)
P: (-56.535,35.569,85.682)
C4': (-56.193,39.487,86.090)
C2': (-55.315,39.643,83.897)
C2: (-50.390,41.955,84.845)
N1: (-49.281,41.252,84.553)
N3: (-51.669,41.575,84.927)
N6: (-48.296,39.271,83.987)
N7: (-51.224,38.128,84.129)
N9: (-52.923,39.525,84.650)
O5': (-55.948,37.065,85.786)
O3': (-56.791,41.352,84.656)
OP2: (-55.770,34.809,84.660)
C3': (-56.581,39.937,84.681)
C1': (-54.264,40.054,84.914)
C5': (-56.660,38.098,86.480)
O4': (-54.738,39.549,86.143)
C8: (-52.523,38.253,84.314)
O2': (-55.188,40.372,82.694)
C6: (-49.406,39.943,84.278)
C5: (-50.719,39.405,84.330)
C4: (-51.769,40.271,84.652)
P: (-56.535,35.569,85.682)
C4': (-56.193,39.487,86.090)
C2': (-55.315,39.643,83.897)
C2: (-50.390,41.955,84.845)
N1: (-49.281,41.252,84.553)
N3: (-51.669,41.575,84.927)
N6: (-48.296,39.271,83.987)
N7: (-51.224,38.128,84.129)
N9: (-52.923,39.525,84.650)
O5': (-55.948,37.065,85.786)
O3': (-56.791,41.352,84.656)
OP1: (-42.820,40.119,83.560)
OP2: (-44.234,39.950,81.453)
C3': (-44.696,39.493,87.487)
C1': (-46.893,40.274,87.386)
C5': (-44.844,38.801,85.022)
O4': (-46.443,40.267,86.064)
C8: (-48.854,38.797,87.007)
O2': (-46.083,39.431,89.504)
C6: (-51.707,40.646,88.153)
C5: (-50.480,40.030,87.734)
C4: (-49.321,40.759,87.880)
P: (-44.134,40.191,82.913)
C4': (-45.045,39.881,86.049)
C2': (-46.047,39.242,88.105)
C2: (-50.446,42.482,88.765)
N1: (-51.651,41.896,88.678)
N3: (-49.247,42.001,88.399)
N6: (-52.924,40.089,88.079)
N7: (-50.152,38.788,87.178)
N9: (-48.305,39.967,87.398)
O5': (-45.152,39.257,83.702)
O3': (-44.103,40.592,88.157)
OP2: (-44.234,39.950,81.453)
C3': (-44.696,39.493,87.487)
C1': (-46.893,40.274,87.386)
C5': (-44.844,38.801,85.022)
O4': (-46.443,40.267,86.064)
C8: (-48.854,38.797,87.007)
O2': (-46.083,39.431,89.504)
C6: (-51.707,40.646,88.153)
C5: (-50.480,40.030,87.734)
C4: (-49.321,40.759,87.880)
P: (-44.134,40.191,82.913)
C4': (-45.045,39.881,86.049)
C2': (-46.047,39.242,88.105)
C2: (-50.446,42.482,88.765)
N1: (-51.651,41.896,88.678)
N3: (-49.247,42.001,88.399)
N6: (-52.924,40.089,88.079)
N7: (-50.152,38.788,87.178)
N9: (-48.305,39.967,87.398)
O5': (-45.152,39.257,83.702)
O3': (-44.103,40.592,88.157)
Image (generated by PyMOL):