Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0451:0465
Extra
PDB:
ATOM 1 O3' A A 450 49.185 147.801 50.104 1.00 69.77 O
ATOM 2 P A A 451 48.866 146.237 49.906 1.00 69.94 P
ATOM 3 OP1 A A 451 49.234 145.895 48.504 1.00 70.01 O
ATOM 4 OP2 A A 451 47.485 145.958 50.395 1.00 70.19 O
ATOM 5 O5' A A 451 49.914 145.528 50.872 1.00 65.63 O
ATOM 6 C5' A A 451 51.319 145.804 50.743 1.00 58.44 C
ATOM 7 C4' A A 451 52.108 144.531 50.880 1.00 54.50 C
ATOM 8 O4' A A 451 52.104 144.084 52.266 1.00 53.13 O
ATOM 9 C3' A A 451 51.592 143.356 50.064 1.00 51.69 C
ATOM 10 O3' A A 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 11 C2' A A 451 50.745 142.612 51.086 1.00 51.31 C
ATOM 12 O2' A A 451 50.556 141.260 50.720 1.00 52.29 O
ATOM 13 C1' A A 451 51.633 142.757 52.325 1.00 50.21 C
ATOM 14 N9 A A 451 51.001 142.539 53.627 1.00 46.82 N
ATOM 15 C8 A A 451 50.096 143.335 54.284 1.00 47.36 C
ATOM 16 N7 A A 451 49.676 142.832 55.418 1.00 45.81 N
ATOM 17 C5 A A 451 50.356 141.628 55.518 1.00 44.07 C
ATOM 18 C6 A A 451 50.337 140.613 56.482 1.00 43.65 C
ATOM 19 N6 A A 451 49.560 140.632 57.569 1.00 41.57 N
ATOM 20 N1 A A 451 51.151 139.555 56.289 1.00 43.69 N
ATOM 21 C2 A A 451 51.921 139.527 55.198 1.00 42.50 C
ATOM 22 N3 A A 451 52.017 140.412 54.217 1.00 43.41 N
ATOM 23 C4 A A 451 51.195 141.449 54.436 1.00 43.97 C
ATOM 24 P G A 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 25 OP1 G A 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 26 OP2 G A 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 27 O5' G A 452 54.434 141.327 48.490 1.00 50.01 O
TER
ATOM 1 O3' A B 464 49.377 138.422 61.370 1.00 38.42 O
ATOM 2 P A B 465 47.950 138.319 60.662 1.00 40.67 P
ATOM 3 OP1 A B 465 47.322 137.037 61.049 1.00 39.20 O
ATOM 4 OP2 A B 465 48.132 138.645 59.221 1.00 39.63 O
ATOM 5 O5' A B 465 47.144 139.507 61.339 1.00 39.50 O
ATOM 6 C5' A B 465 46.928 139.549 62.756 1.00 39.63 C
ATOM 7 C4' A B 465 46.420 140.912 63.149 1.00 41.34 C
ATOM 8 O4' A B 465 47.464 141.894 62.899 1.00 43.32 O
ATOM 9 C3' A B 465 45.254 141.410 62.313 1.00 41.06 C
ATOM 10 O3' A B 465 44.012 140.894 62.740 1.00 41.12 O
ATOM 11 C2' A B 465 45.372 142.916 62.455 1.00 41.87 C
ATOM 12 O2' A B 465 44.912 143.368 63.712 1.00 42.90 O
ATOM 13 C1' A B 465 46.889 143.086 62.381 1.00 41.89 C
ATOM 14 N9 A B 465 47.395 143.277 61.020 1.00 40.03 N
ATOM 15 C8 A B 465 48.014 142.352 60.212 1.00 40.20 C
ATOM 16 N7 A B 465 48.404 142.834 59.056 1.00 40.24 N
ATOM 17 C5 A B 465 48.004 144.162 59.099 1.00 38.87 C
ATOM 18 C6 A B 465 48.136 145.219 58.183 1.00 37.70 C
ATOM 19 N6 A B 465 48.737 145.108 56.996 1.00 38.37 N
ATOM 20 N1 A B 465 47.626 146.414 58.534 1.00 36.61 N
ATOM 21 C2 A B 465 47.030 146.534 59.727 1.00 36.52 C
ATOM 22 N3 A B 465 46.850 145.623 60.672 1.00 38.07 N
ATOM 23 C4 A B 465 47.366 144.444 60.295 1.00 39.18 C
ATOM 24 P C B 466 42.904 140.507 61.644 1.00 41.95 P
ATOM 25 OP1 C B 466 41.768 139.885 62.366 1.00 44.81 O
ATOM 26 OP2 C B 466 43.560 139.765 60.543 1.00 39.98 O
ATOM 27 O5' C B 466 42.416 141.914 61.081 1.00 43.31 O
TER
ATOM 2 P A A 451 48.866 146.237 49.906 1.00 69.94 P
ATOM 3 OP1 A A 451 49.234 145.895 48.504 1.00 70.01 O
ATOM 4 OP2 A A 451 47.485 145.958 50.395 1.00 70.19 O
ATOM 5 O5' A A 451 49.914 145.528 50.872 1.00 65.63 O
ATOM 6 C5' A A 451 51.319 145.804 50.743 1.00 58.44 C
ATOM 7 C4' A A 451 52.108 144.531 50.880 1.00 54.50 C
ATOM 8 O4' A A 451 52.104 144.084 52.266 1.00 53.13 O
ATOM 9 C3' A A 451 51.592 143.356 50.064 1.00 51.69 C
ATOM 10 O3' A A 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 11 C2' A A 451 50.745 142.612 51.086 1.00 51.31 C
ATOM 12 O2' A A 451 50.556 141.260 50.720 1.00 52.29 O
ATOM 13 C1' A A 451 51.633 142.757 52.325 1.00 50.21 C
ATOM 14 N9 A A 451 51.001 142.539 53.627 1.00 46.82 N
ATOM 15 C8 A A 451 50.096 143.335 54.284 1.00 47.36 C
ATOM 16 N7 A A 451 49.676 142.832 55.418 1.00 45.81 N
ATOM 17 C5 A A 451 50.356 141.628 55.518 1.00 44.07 C
ATOM 18 C6 A A 451 50.337 140.613 56.482 1.00 43.65 C
ATOM 19 N6 A A 451 49.560 140.632 57.569 1.00 41.57 N
ATOM 20 N1 A A 451 51.151 139.555 56.289 1.00 43.69 N
ATOM 21 C2 A A 451 51.921 139.527 55.198 1.00 42.50 C
ATOM 22 N3 A A 451 52.017 140.412 54.217 1.00 43.41 N
ATOM 23 C4 A A 451 51.195 141.449 54.436 1.00 43.97 C
ATOM 24 P G A 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 25 OP1 G A 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 26 OP2 G A 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 27 O5' G A 452 54.434 141.327 48.490 1.00 50.01 O
TER
ATOM 1 O3' A B 464 49.377 138.422 61.370 1.00 38.42 O
ATOM 2 P A B 465 47.950 138.319 60.662 1.00 40.67 P
ATOM 3 OP1 A B 465 47.322 137.037 61.049 1.00 39.20 O
ATOM 4 OP2 A B 465 48.132 138.645 59.221 1.00 39.63 O
ATOM 5 O5' A B 465 47.144 139.507 61.339 1.00 39.50 O
ATOM 6 C5' A B 465 46.928 139.549 62.756 1.00 39.63 C
ATOM 7 C4' A B 465 46.420 140.912 63.149 1.00 41.34 C
ATOM 8 O4' A B 465 47.464 141.894 62.899 1.00 43.32 O
ATOM 9 C3' A B 465 45.254 141.410 62.313 1.00 41.06 C
ATOM 10 O3' A B 465 44.012 140.894 62.740 1.00 41.12 O
ATOM 11 C2' A B 465 45.372 142.916 62.455 1.00 41.87 C
ATOM 12 O2' A B 465 44.912 143.368 63.712 1.00 42.90 O
ATOM 13 C1' A B 465 46.889 143.086 62.381 1.00 41.89 C
ATOM 14 N9 A B 465 47.395 143.277 61.020 1.00 40.03 N
ATOM 15 C8 A B 465 48.014 142.352 60.212 1.00 40.20 C
ATOM 16 N7 A B 465 48.404 142.834 59.056 1.00 40.24 N
ATOM 17 C5 A B 465 48.004 144.162 59.099 1.00 38.87 C
ATOM 18 C6 A B 465 48.136 145.219 58.183 1.00 37.70 C
ATOM 19 N6 A B 465 48.737 145.108 56.996 1.00 38.37 N
ATOM 20 N1 A B 465 47.626 146.414 58.534 1.00 36.61 N
ATOM 21 C2 A B 465 47.030 146.534 59.727 1.00 36.52 C
ATOM 22 N3 A B 465 46.850 145.623 60.672 1.00 38.07 N
ATOM 23 C4 A B 465 47.366 144.444 60.295 1.00 39.18 C
ATOM 24 P C B 466 42.904 140.507 61.644 1.00 41.95 P
ATOM 25 OP1 C B 466 41.768 139.885 62.366 1.00 44.81 O
ATOM 26 OP2 C B 466 43.560 139.765 60.543 1.00 39.98 O
ATOM 27 O5' C B 466 42.416 141.914 61.081 1.00 43.31 O
TER
Atoms:
OP1: (49.234,145.895,48.504)
OP2: (47.485,145.958,50.395)
C3': (51.592,143.356,50.064)
C1': (51.633,142.757,52.325)
C5': (51.319,145.804,50.743)
O4': (52.104,144.084,52.266)
C8: (50.096,143.335,54.284)
O2': (50.556,141.260,50.720)
C6: (50.337,140.613,56.482)
C5: (50.356,141.628,55.518)
C4: (51.195,141.449,54.436)
P: (48.866,146.237,49.906)
C4': (52.108,144.531,50.880)
C2': (50.745,142.612,51.086)
C2: (51.921,139.527,55.198)
N1: (51.151,139.555,56.289)
N3: (52.017,140.412,54.217)
N6: (49.560,140.632,57.569)
N7: (49.676,142.832,55.418)
N9: (51.001,142.539,53.627)
O5': (49.914,145.528,50.872)
O3': (52.706,142.538,49.797)
OP2: (47.485,145.958,50.395)
C3': (51.592,143.356,50.064)
C1': (51.633,142.757,52.325)
C5': (51.319,145.804,50.743)
O4': (52.104,144.084,52.266)
C8: (50.096,143.335,54.284)
O2': (50.556,141.260,50.720)
C6: (50.337,140.613,56.482)
C5: (50.356,141.628,55.518)
C4: (51.195,141.449,54.436)
P: (48.866,146.237,49.906)
C4': (52.108,144.531,50.880)
C2': (50.745,142.612,51.086)
C2: (51.921,139.527,55.198)
N1: (51.151,139.555,56.289)
N3: (52.017,140.412,54.217)
N6: (49.560,140.632,57.569)
N7: (49.676,142.832,55.418)
N9: (51.001,142.539,53.627)
O5': (49.914,145.528,50.872)
O3': (52.706,142.538,49.797)
OP1: (47.322,137.037,61.049)
OP2: (48.132,138.645,59.221)
C3': (45.254,141.410,62.313)
C1': (46.889,143.086,62.381)
C5': (46.928,139.549,62.756)
O4': (47.464,141.894,62.899)
C8: (48.014,142.352,60.212)
O2': (44.912,143.368,63.712)
C6: (48.136,145.219,58.183)
C5: (48.004,144.162,59.099)
C4: (47.366,144.444,60.295)
P: (47.950,138.319,60.662)
C4': (46.420,140.912,63.149)
C2': (45.372,142.916,62.455)
C2: (47.030,146.534,59.727)
N1: (47.626,146.414,58.534)
N3: (46.850,145.623,60.672)
N6: (48.737,145.108,56.996)
N7: (48.404,142.834,59.056)
N9: (47.395,143.277,61.020)
O5': (47.144,139.507,61.339)
O3': (44.012,140.894,62.740)
OP2: (48.132,138.645,59.221)
C3': (45.254,141.410,62.313)
C1': (46.889,143.086,62.381)
C5': (46.928,139.549,62.756)
O4': (47.464,141.894,62.899)
C8: (48.014,142.352,60.212)
O2': (44.912,143.368,63.712)
C6: (48.136,145.219,58.183)
C5: (48.004,144.162,59.099)
C4: (47.366,144.444,60.295)
P: (47.950,138.319,60.662)
C4': (46.420,140.912,63.149)
C2': (45.372,142.916,62.455)
C2: (47.030,146.534,59.727)
N1: (47.626,146.414,58.534)
N3: (46.850,145.623,60.672)
N6: (48.737,145.108,56.996)
N7: (48.404,142.834,59.056)
N9: (47.395,143.277,61.020)
O5': (47.144,139.507,61.339)
O3': (44.012,140.894,62.740)
Image (generated by PyMOL):