Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A343:A1164
Extra
PDB:
ATOM 1 O3' A A 342 54.291-109.384 -51.068 1.00 57.35 O
ATOM 2 P A A 343 54.666-108.213 -52.090 1.00 58.58 P
ATOM 3 OP1 A A 343 55.846-107.477 -51.580 1.00 47.50 O
ATOM 4 OP2 A A 343 53.408-107.471 -52.310 1.00 62.06 O
ATOM 5 O5' A A 343 55.036-109.042 -53.406 1.00 49.40 O
ATOM 6 C5' A A 343 55.980-108.556 -54.356 1.00 53.82 C
ATOM 7 C4' A A 343 56.566-109.695 -55.168 1.00 60.23 C
ATOM 8 O4' A A 343 57.346-110.578 -54.305 1.00 58.69 O
ATOM 9 C3' A A 343 55.585-110.585 -55.942 1.00 52.98 C
ATOM 10 O3' A A 343 56.071-110.908 -57.249 1.00 47.70 O
ATOM 11 C2' A A 343 55.575-111.877 -55.139 1.00 52.74 C
ATOM 12 O2' A A 343 55.364-112.973 -55.999 1.00 56.86 O
ATOM 13 C1' A A 343 56.997-111.919 -54.584 1.00 56.19 C
ATOM 14 N9 A A 343 57.155-112.736 -53.374 1.00 60.47 N
ATOM 15 C8 A A 343 56.433-112.709 -52.201 1.00 58.58 C
ATOM 16 N7 A A 343 56.815-113.606 -51.317 1.00 59.80 N
ATOM 17 C5 A A 343 57.866-114.260 -51.944 1.00 59.47 C
ATOM 18 C6 A A 343 58.708-115.311 -51.529 1.00 60.81 C
ATOM 19 N6 A A 343 58.585-115.945 -50.355 1.00 64.51 N
ATOM 20 N1 A A 343 59.685-115.703 -52.380 1.00 60.41 N
ATOM 21 C2 A A 343 59.781-115.094 -53.578 1.00 62.34 C
ATOM 22 N3 A A 343 59.036-114.112 -54.090 1.00 58.17 N
ATOM 23 C4 A A 343 58.091-113.731 -53.210 1.00 59.29 C
ATOM 24 P A A 344 55.805-109.902 -58.472 1.00 57.70 P
ATOM 25 OP1 A A 344 57.060-109.820 -59.244 1.00 63.06 O
ATOM 26 OP2 A A 344 55.222-108.652 -57.910 1.00 50.83 O
ATOM 27 O5' A A 344 54.727-110.648 -59.387 1.00 48.01 O
TER
ATOM 1 O3' G B1163 61.202-115.896 -46.856 1.00 52.84 O
ATOM 2 P A B1164 60.546-117.308 -47.234 1.00 54.20 P
ATOM 3 OP1 A B1164 61.354-118.320 -46.520 1.00 50.26 O
ATOM 4 OP2 A B1164 60.430-117.378 -48.716 1.00 44.28 O
ATOM 5 O5' A B1164 59.083-117.210 -46.588 1.00 52.98 O
ATOM 6 C5' A B1164 58.860-117.441 -45.191 1.00 54.51 C
ATOM 7 C4' A B1164 57.406-117.188 -44.840 1.00 55.67 C
ATOM 8 O4' A B1164 57.145-115.779 -44.662 1.00 49.54 O
ATOM 9 C3' A B1164 56.423-117.671 -45.892 1.00 60.54 C
ATOM 10 O3' A B1164 56.127-119.052 -45.683 1.00 61.98 O
ATOM 11 C2' A B1164 55.236-116.716 -45.790 1.00 58.71 C
ATOM 12 O2' A B1164 54.086-117.157 -45.100 1.00 69.60 O
ATOM 13 C1' A B1164 55.869-115.461 -45.173 1.00 52.37 C
ATOM 14 N9 A B1164 56.063-114.407 -46.148 1.00 57.17 N
ATOM 15 C8 A B1164 56.856-114.461 -47.271 1.00 60.06 C
ATOM 16 N7 A B1164 56.899-113.342 -47.938 1.00 58.21 N
ATOM 17 C5 A B1164 56.085-112.496 -47.217 1.00 51.87 C
ATOM 18 C6 A B1164 55.759-111.176 -47.389 1.00 50.99 C
ATOM 19 N6 A B1164 56.282-110.434 -48.365 1.00 54.66 N
ATOM 20 N1 A B1164 54.895-110.618 -46.518 1.00 55.42 N
ATOM 21 C2 A B1164 54.421-111.375 -45.511 1.00 56.17 C
ATOM 22 N3 A B1164 54.684-112.640 -45.220 1.00 55.10 N
ATOM 23 C4 A B1164 55.535-113.149 -46.125 1.00 55.70 C
ATOM 24 P U B1165 55.426-119.533 -44.314 1.00 58.24 P
ATOM 25 OP1 U B1165 54.267-120.394 -44.663 1.00 75.77 O
ATOM 26 OP2 U B1165 55.234-118.405 -43.367 1.00 58.77 O
ATOM 27 O5' U B1165 56.552-120.424 -43.647 1.00 60.49 O
TER
ATOM 2 P A A 343 54.666-108.213 -52.090 1.00 58.58 P
ATOM 3 OP1 A A 343 55.846-107.477 -51.580 1.00 47.50 O
ATOM 4 OP2 A A 343 53.408-107.471 -52.310 1.00 62.06 O
ATOM 5 O5' A A 343 55.036-109.042 -53.406 1.00 49.40 O
ATOM 6 C5' A A 343 55.980-108.556 -54.356 1.00 53.82 C
ATOM 7 C4' A A 343 56.566-109.695 -55.168 1.00 60.23 C
ATOM 8 O4' A A 343 57.346-110.578 -54.305 1.00 58.69 O
ATOM 9 C3' A A 343 55.585-110.585 -55.942 1.00 52.98 C
ATOM 10 O3' A A 343 56.071-110.908 -57.249 1.00 47.70 O
ATOM 11 C2' A A 343 55.575-111.877 -55.139 1.00 52.74 C
ATOM 12 O2' A A 343 55.364-112.973 -55.999 1.00 56.86 O
ATOM 13 C1' A A 343 56.997-111.919 -54.584 1.00 56.19 C
ATOM 14 N9 A A 343 57.155-112.736 -53.374 1.00 60.47 N
ATOM 15 C8 A A 343 56.433-112.709 -52.201 1.00 58.58 C
ATOM 16 N7 A A 343 56.815-113.606 -51.317 1.00 59.80 N
ATOM 17 C5 A A 343 57.866-114.260 -51.944 1.00 59.47 C
ATOM 18 C6 A A 343 58.708-115.311 -51.529 1.00 60.81 C
ATOM 19 N6 A A 343 58.585-115.945 -50.355 1.00 64.51 N
ATOM 20 N1 A A 343 59.685-115.703 -52.380 1.00 60.41 N
ATOM 21 C2 A A 343 59.781-115.094 -53.578 1.00 62.34 C
ATOM 22 N3 A A 343 59.036-114.112 -54.090 1.00 58.17 N
ATOM 23 C4 A A 343 58.091-113.731 -53.210 1.00 59.29 C
ATOM 24 P A A 344 55.805-109.902 -58.472 1.00 57.70 P
ATOM 25 OP1 A A 344 57.060-109.820 -59.244 1.00 63.06 O
ATOM 26 OP2 A A 344 55.222-108.652 -57.910 1.00 50.83 O
ATOM 27 O5' A A 344 54.727-110.648 -59.387 1.00 48.01 O
TER
ATOM 1 O3' G B1163 61.202-115.896 -46.856 1.00 52.84 O
ATOM 2 P A B1164 60.546-117.308 -47.234 1.00 54.20 P
ATOM 3 OP1 A B1164 61.354-118.320 -46.520 1.00 50.26 O
ATOM 4 OP2 A B1164 60.430-117.378 -48.716 1.00 44.28 O
ATOM 5 O5' A B1164 59.083-117.210 -46.588 1.00 52.98 O
ATOM 6 C5' A B1164 58.860-117.441 -45.191 1.00 54.51 C
ATOM 7 C4' A B1164 57.406-117.188 -44.840 1.00 55.67 C
ATOM 8 O4' A B1164 57.145-115.779 -44.662 1.00 49.54 O
ATOM 9 C3' A B1164 56.423-117.671 -45.892 1.00 60.54 C
ATOM 10 O3' A B1164 56.127-119.052 -45.683 1.00 61.98 O
ATOM 11 C2' A B1164 55.236-116.716 -45.790 1.00 58.71 C
ATOM 12 O2' A B1164 54.086-117.157 -45.100 1.00 69.60 O
ATOM 13 C1' A B1164 55.869-115.461 -45.173 1.00 52.37 C
ATOM 14 N9 A B1164 56.063-114.407 -46.148 1.00 57.17 N
ATOM 15 C8 A B1164 56.856-114.461 -47.271 1.00 60.06 C
ATOM 16 N7 A B1164 56.899-113.342 -47.938 1.00 58.21 N
ATOM 17 C5 A B1164 56.085-112.496 -47.217 1.00 51.87 C
ATOM 18 C6 A B1164 55.759-111.176 -47.389 1.00 50.99 C
ATOM 19 N6 A B1164 56.282-110.434 -48.365 1.00 54.66 N
ATOM 20 N1 A B1164 54.895-110.618 -46.518 1.00 55.42 N
ATOM 21 C2 A B1164 54.421-111.375 -45.511 1.00 56.17 C
ATOM 22 N3 A B1164 54.684-112.640 -45.220 1.00 55.10 N
ATOM 23 C4 A B1164 55.535-113.149 -46.125 1.00 55.70 C
ATOM 24 P U B1165 55.426-119.533 -44.314 1.00 58.24 P
ATOM 25 OP1 U B1165 54.267-120.394 -44.663 1.00 75.77 O
ATOM 26 OP2 U B1165 55.234-118.405 -43.367 1.00 58.77 O
ATOM 27 O5' U B1165 56.552-120.424 -43.647 1.00 60.49 O
TER
Atoms:
OP1: (55.846,-107.477,-51.580)
OP2: (53.408,-107.471,-52.310)
C3': (55.585,-110.585,-55.942)
C1': (56.997,-111.919,-54.584)
C5': (55.980,-108.556,-54.356)
O4': (57.346,-110.578,-54.305)
C8: (56.433,-112.709,-52.201)
O2': (55.364,-112.973,-55.999)
C6: (58.708,-115.311,-51.529)
C5: (57.866,-114.260,-51.944)
C4: (58.091,-113.731,-53.210)
P: (54.666,-108.213,-52.090)
C4': (56.566,-109.695,-55.168)
C2': (55.575,-111.877,-55.139)
C2: (59.781,-115.094,-53.578)
N1: (59.685,-115.703,-52.380)
N3: (59.036,-114.112,-54.090)
N6: (58.585,-115.945,-50.355)
N7: (56.815,-113.606,-51.317)
N9: (57.155,-112.736,-53.374)
O5': (55.036,-109.042,-53.406)
O3': (56.071,-110.908,-57.249)
OP2: (53.408,-107.471,-52.310)
C3': (55.585,-110.585,-55.942)
C1': (56.997,-111.919,-54.584)
C5': (55.980,-108.556,-54.356)
O4': (57.346,-110.578,-54.305)
C8: (56.433,-112.709,-52.201)
O2': (55.364,-112.973,-55.999)
C6: (58.708,-115.311,-51.529)
C5: (57.866,-114.260,-51.944)
C4: (58.091,-113.731,-53.210)
P: (54.666,-108.213,-52.090)
C4': (56.566,-109.695,-55.168)
C2': (55.575,-111.877,-55.139)
C2: (59.781,-115.094,-53.578)
N1: (59.685,-115.703,-52.380)
N3: (59.036,-114.112,-54.090)
N6: (58.585,-115.945,-50.355)
N7: (56.815,-113.606,-51.317)
N9: (57.155,-112.736,-53.374)
O5': (55.036,-109.042,-53.406)
O3': (56.071,-110.908,-57.249)
OP1: (61.354,-118.320,-46.520)
OP2: (60.430,-117.378,-48.716)
C3': (56.423,-117.671,-45.892)
C1': (55.869,-115.461,-45.173)
C5': (58.860,-117.441,-45.191)
O4': (57.145,-115.779,-44.662)
C8: (56.856,-114.461,-47.271)
O2': (54.086,-117.157,-45.100)
C6: (55.759,-111.176,-47.389)
C5: (56.085,-112.496,-47.217)
C4: (55.535,-113.149,-46.125)
P: (60.546,-117.308,-47.234)
C4': (57.406,-117.188,-44.840)
C2': (55.236,-116.716,-45.790)
C2: (54.421,-111.375,-45.511)
N1: (54.895,-110.618,-46.518)
N3: (54.684,-112.640,-45.220)
N6: (56.282,-110.434,-48.365)
N7: (56.899,-113.342,-47.938)
N9: (56.063,-114.407,-46.148)
O5': (59.083,-117.210,-46.588)
O3': (56.127,-119.052,-45.683)
OP2: (60.430,-117.378,-48.716)
C3': (56.423,-117.671,-45.892)
C1': (55.869,-115.461,-45.173)
C5': (58.860,-117.441,-45.191)
O4': (57.145,-115.779,-44.662)
C8: (56.856,-114.461,-47.271)
O2': (54.086,-117.157,-45.100)
C6: (55.759,-111.176,-47.389)
C5: (56.085,-112.496,-47.217)
C4: (55.535,-113.149,-46.125)
P: (60.546,-117.308,-47.234)
C4': (57.406,-117.188,-44.840)
C2': (55.236,-116.716,-45.790)
C2: (54.421,-111.375,-45.511)
N1: (54.895,-110.618,-46.518)
N3: (54.684,-112.640,-45.220)
N6: (56.282,-110.434,-48.365)
N7: (56.899,-113.342,-47.938)
N9: (56.063,-114.407,-46.148)
O5': (59.083,-117.210,-46.588)
O3': (56.127,-119.052,-45.683)
Image (generated by PyMOL):