ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A477:A525

Extra

PDB:
ATOM 1 O3' U A 476 -105.528 22.439 -76.820 1.00 51.30 O
ATOM 2 P A A 477 -106.018 23.416 -75.625 1.00 45.82 P
ATOM 3 OP1 A A 477 -107.413 23.011 -75.294 1.00 15.96 O
ATOM 4 OP2 A A 477 -105.734 24.816 -76.042 1.00 16.64 O
ATOM 5 O5' A A 477 -105.084 23.085 -74.363 1.00 35.16 O
ATOM 6 C5' A A 477 -105.480 22.104 -73.357 1.00 33.44 C
ATOM 7 C4' A A 477 -104.756 22.341 -72.039 1.00 31.60 C
ATOM 8 O4' A A 477 -103.323 22.403 -72.281 1.00 31.18 O
ATOM 9 C3' A A 477 -105.114 23.613 -71.260 1.00 31.28 C
ATOM 10 O3' A A 477 -105.012 23.405 -69.858 1.00 32.34 O
ATOM 11 C2' A A 477 -103.923 24.518 -71.535 1.00 30.86 C
ATOM 12 O2' A A 477 -103.700 25.424 -70.477 1.00 31.02 O
ATOM 13 C1' A A 477 -102.796 23.497 -71.579 1.00 30.93 C
ATOM 14 N9 A A 477 -101.580 23.968 -72.224 1.00 19.08 N
ATOM 15 C8 A A 477 -101.332 24.261 -73.538 1.00 18.50 C
ATOM 16 N7 A A 477 -100.109 24.702 -73.755 1.00 18.25 N
ATOM 17 C5 A A 477 -99.520 24.687 -72.498 1.00 17.18 C
ATOM 18 C6 A A 477 -98.236 25.037 -72.044 1.00 15.91 C
ATOM 19 N6 A A 477 -97.254 25.479 -72.832 1.00 15.54 N
ATOM 20 N1 A A 477 -97.985 24.910 -70.729 1.00 15.15 N
ATOM 21 C2 A A 477 -98.954 24.451 -69.936 1.00 14.97 C
ATOM 22 N3 A A 477 -100.192 24.082 -70.241 1.00 17.05 N
ATOM 23 C4 A A 477 -100.414 24.229 -71.551 1.00 17.99 C
ATOM 24 P G A 478 -106.173 22.667 -69.049 1.00 36.42 P
ATOM 25 OP1 G A 478 -106.899 21.763 -69.969 1.00 25.09 O
ATOM 26 OP2 G A 478 -106.938 23.651 -68.253 1.00 23.20 O
ATOM 27 O5' G A 478 -105.310 21.771 -68.059 1.00 23.09 O
TER

ATOM 1 O3' G B 524 -93.519 27.984 -70.173 1.00 3.08 O
ATOM 2 P A B 525 -93.560 27.991 -71.777 1.00 45.16 P
ATOM 3 OP1 A B 525 -92.164 27.703 -72.233 1.00 58.06 O
ATOM 4 OP2 A B 525 -94.235 29.228 -72.227 1.00 58.26 O
ATOM 5 O5' A B 525 -94.491 26.745 -72.126 1.00 8.89 O
ATOM 6 C5' A B 525 -93.924 25.577 -72.757 1.00 8.10 C
ATOM 7 C4' A B 525 -93.647 24.486 -71.737 1.00 6.50 C
ATOM 8 O4' A B 525 -94.908 23.905 -71.307 1.00 6.20 O
ATOM 9 C3' A B 525 -92.811 23.338 -72.287 1.00 5.69 C
ATOM 10 O3' A B 525 -91.987 22.801 -71.255 1.00 5.11 O
ATOM 11 C2' A B 525 -93.875 22.315 -72.686 1.00 5.30 C
ATOM 12 O2' A B 525 -93.422 20.973 -72.701 1.00 6.32 O
ATOM 13 C1' A B 525 -94.932 22.531 -71.604 1.00 4.72 C
ATOM 14 N9 A B 525 -96.300 22.189 -71.978 1.00 32.25 N
ATOM 15 C8 A B 525 -96.953 22.366 -73.173 1.00 32.33 C
ATOM 16 N7 A B 525 -98.217 22.016 -73.138 1.00 33.66 N
ATOM 17 C5 A B 525 -98.403 21.563 -71.838 1.00 33.52 C
ATOM 18 C6 A B 525 -99.539 21.074 -71.144 1.00 35.29 C
ATOM 19 N6 A B 525 -100.757 20.985 -71.675 1.00 38.92 N
ATOM 20 N1 A B 525 -99.376 20.692 -69.860 1.00 34.88 N
ATOM 21 C2 A B 525 -98.163 20.817 -69.309 1.00 34.39 C
ATOM 22 N3 A B 525 -97.028 21.282 -69.846 1.00 33.24 N
ATOM 23 C4 A B 525 -97.222 21.641 -71.124 1.00 33.03 C
ATOM 24 P G B 526 -90.683 23.601 -70.750 1.00 32.85 P
ATOM 25 OP1 G B 526 -90.109 24.353 -71.893 1.00 35.44 O
ATOM 26 OP2 G B 526 -89.810 22.681 -69.986 1.00 36.47 O
ATOM 27 O5' G B 526 -91.292 24.651 -69.717 1.00 8.29 O
TER

Atoms:
OP1: (-107.413,23.011,-75.294)
OP2: (-105.734,24.816,-76.042)
C3': (-105.114,23.613,-71.260)
C1': (-102.796,23.497,-71.579)
C5': (-105.480,22.104,-73.357)
O4': (-103.323,22.403,-72.281)
C8: (-101.332,24.261,-73.538)
O2': (-103.700,25.424,-70.477)
C6: (-98.236,25.037,-72.044)
C5: (-99.520,24.687,-72.498)
C4: (-100.414,24.229,-71.551)
P: (-106.018,23.416,-75.625)
C4': (-104.756,22.341,-72.039)
C2': (-103.923,24.518,-71.535)
C2: (-98.954,24.451,-69.936)
N1: (-97.985,24.910,-70.729)
N3: (-100.192,24.082,-70.241)
N6: (-97.254,25.479,-72.832)
N7: (-100.109,24.702,-73.755)
N9: (-101.580,23.968,-72.224)
O5': (-105.084,23.085,-74.363)
O3': (-105.012,23.405,-69.858)
OP1: (-92.164,27.703,-72.233)
OP2: (-94.235,29.228,-72.227)
C3': (-92.811,23.338,-72.287)
C1': (-94.932,22.531,-71.604)
C5': (-93.924,25.577,-72.757)
O4': (-94.908,23.905,-71.307)
C8: (-96.953,22.366,-73.173)
O2': (-93.422,20.973,-72.701)
C6: (-99.539,21.074,-71.144)
C5: (-98.403,21.563,-71.838)
C4: (-97.222,21.641,-71.124)
P: (-93.560,27.991,-71.777)
C4': (-93.647,24.486,-71.737)
C2': (-93.875,22.315,-72.686)
C2: (-98.163,20.817,-69.309)
N1: (-99.376,20.692,-69.860)
N3: (-97.028,21.282,-69.846)
N6: (-100.757,20.985,-71.675)
N7: (-98.217,22.016,-73.138)
N9: (-96.300,22.189,-71.978)
O5': (-94.491,26.745,-72.126)
O3': (-91.987,22.801,-71.255)
Image (generated by PyMOL):
PyMOL image
show in jmol