Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0973:02148
Extra
PDB:
ATOM 1 O3' A A 972 43.589 63.033 108.655 1.00 36.85 O
ATOM 2 P A A 973 42.809 63.438 107.314 1.00 38.01 P
ATOM 3 OP1 A A 973 41.587 62.593 107.247 1.00 39.62 O
ATOM 4 OP2 A A 973 43.769 63.396 106.194 1.00 37.58 O
ATOM 5 O5' A A 973 42.382 64.949 107.597 1.00 34.32 O
ATOM 6 C5' A A 973 41.443 65.255 108.644 1.00 35.17 C
ATOM 7 C4' A A 973 41.470 66.726 108.982 1.00 35.94 C
ATOM 8 O4' A A 973 42.784 67.086 109.476 1.00 37.58 O
ATOM 9 C3' A A 973 41.202 67.711 107.855 1.00 35.64 C
ATOM 10 O3' A A 973 39.808 67.914 107.670 1.00 39.32 O
ATOM 11 C2' A A 973 41.843 68.978 108.405 1.00 36.99 C
ATOM 12 O2' A A 973 41.049 69.621 109.382 1.00 34.80 O
ATOM 13 C1' A A 973 43.097 68.412 109.074 1.00 37.03 C
ATOM 14 N9 A A 973 44.208 68.351 108.123 1.00 37.55 N
ATOM 15 C8 A A 973 44.709 67.248 107.470 1.00 38.36 C
ATOM 16 N7 A A 973 45.680 67.522 106.637 1.00 38.29 N
ATOM 17 C5 A A 973 45.838 68.896 106.757 1.00 37.86 C
ATOM 18 C6 A A 973 46.708 69.799 106.135 1.00 36.98 C
ATOM 19 N6 A A 973 47.615 69.444 105.222 1.00 36.24 N
ATOM 20 N1 A A 973 46.615 71.097 106.485 1.00 36.64 N
ATOM 21 C2 A A 973 45.702 71.451 107.398 1.00 37.88 C
ATOM 22 N3 A A 973 44.827 70.696 108.050 1.00 36.42 N
ATOM 23 C4 A A 973 44.947 69.414 107.679 1.00 36.70 C
ATOM 24 P C A 974 39.186 68.057 106.190 1.00 40.30 P
ATOM 25 OP1 C A 974 38.047 68.997 106.346 1.00 37.99 O
ATOM 26 OP2 C A 974 38.954 66.704 105.626 1.00 41.29 O
ATOM 27 O5' C A 974 40.323 68.757 105.321 1.00 40.43 O
TER
ATOM 1 O3' A B2147 50.877 72.446 103.857 1.00 37.28 O
ATOM 2 P A B2148 50.154 71.394 102.897 1.00 36.92 P
ATOM 3 OP1 A B2148 50.298 71.833 101.491 1.00 38.37 O
ATOM 4 OP2 A B2148 48.803 71.201 103.465 1.00 39.70 O
ATOM 5 O5' A B2148 50.961 70.038 103.116 1.00 36.75 O
ATOM 6 C5' A B2148 52.304 69.876 102.627 1.00 37.05 C
ATOM 7 C4' A B2148 52.544 68.436 102.234 1.00 37.67 C
ATOM 8 O4' A B2148 52.438 67.581 103.407 1.00 38.46 O
ATOM 9 C3' A B2148 51.524 67.861 101.267 1.00 36.91 C
ATOM 10 O3' A B2148 51.809 68.217 99.921 1.00 36.55 O
ATOM 11 C2' A B2148 51.634 66.365 101.534 1.00 38.02 C
ATOM 12 O2' A B2148 52.747 65.745 100.917 1.00 39.76 O
ATOM 13 C1' A B2148 51.817 66.354 103.054 1.00 38.35 C
ATOM 14 N9 A B2148 50.527 66.285 103.742 1.00 38.30 N
ATOM 15 C8 A B2148 49.827 67.317 104.317 1.00 38.36 C
ATOM 16 N7 A B2148 48.671 66.959 104.818 1.00 39.37 N
ATOM 17 C5 A B2148 48.606 65.596 104.565 1.00 38.50 C
ATOM 18 C6 A B2148 47.625 64.631 104.848 1.00 38.75 C
ATOM 19 N6 A B2148 46.468 64.908 105.458 1.00 35.79 N
ATOM 20 N1 A B2148 47.876 63.356 104.473 1.00 39.02 N
ATOM 21 C2 A B2148 49.033 63.085 103.845 1.00 38.95 C
ATOM 22 N3 A B2148 50.026 63.907 103.518 1.00 38.40 N
ATOM 23 C4 A B2148 49.749 65.163 103.913 1.00 38.52 C
ATOM 24 P A B2149 50.650 68.844 99.000 1.00 34.78 P
ATOM 25 OP1 A B2149 50.924 70.287 98.830 1.00 32.86 O
ATOM 26 OP2 A B2149 49.341 68.407 99.528 1.00 34.08 O
ATOM 27 O5' A B2149 50.876 68.157 97.586 1.00 34.69 O
TER
ATOM 2 P A A 973 42.809 63.438 107.314 1.00 38.01 P
ATOM 3 OP1 A A 973 41.587 62.593 107.247 1.00 39.62 O
ATOM 4 OP2 A A 973 43.769 63.396 106.194 1.00 37.58 O
ATOM 5 O5' A A 973 42.382 64.949 107.597 1.00 34.32 O
ATOM 6 C5' A A 973 41.443 65.255 108.644 1.00 35.17 C
ATOM 7 C4' A A 973 41.470 66.726 108.982 1.00 35.94 C
ATOM 8 O4' A A 973 42.784 67.086 109.476 1.00 37.58 O
ATOM 9 C3' A A 973 41.202 67.711 107.855 1.00 35.64 C
ATOM 10 O3' A A 973 39.808 67.914 107.670 1.00 39.32 O
ATOM 11 C2' A A 973 41.843 68.978 108.405 1.00 36.99 C
ATOM 12 O2' A A 973 41.049 69.621 109.382 1.00 34.80 O
ATOM 13 C1' A A 973 43.097 68.412 109.074 1.00 37.03 C
ATOM 14 N9 A A 973 44.208 68.351 108.123 1.00 37.55 N
ATOM 15 C8 A A 973 44.709 67.248 107.470 1.00 38.36 C
ATOM 16 N7 A A 973 45.680 67.522 106.637 1.00 38.29 N
ATOM 17 C5 A A 973 45.838 68.896 106.757 1.00 37.86 C
ATOM 18 C6 A A 973 46.708 69.799 106.135 1.00 36.98 C
ATOM 19 N6 A A 973 47.615 69.444 105.222 1.00 36.24 N
ATOM 20 N1 A A 973 46.615 71.097 106.485 1.00 36.64 N
ATOM 21 C2 A A 973 45.702 71.451 107.398 1.00 37.88 C
ATOM 22 N3 A A 973 44.827 70.696 108.050 1.00 36.42 N
ATOM 23 C4 A A 973 44.947 69.414 107.679 1.00 36.70 C
ATOM 24 P C A 974 39.186 68.057 106.190 1.00 40.30 P
ATOM 25 OP1 C A 974 38.047 68.997 106.346 1.00 37.99 O
ATOM 26 OP2 C A 974 38.954 66.704 105.626 1.00 41.29 O
ATOM 27 O5' C A 974 40.323 68.757 105.321 1.00 40.43 O
TER
ATOM 1 O3' A B2147 50.877 72.446 103.857 1.00 37.28 O
ATOM 2 P A B2148 50.154 71.394 102.897 1.00 36.92 P
ATOM 3 OP1 A B2148 50.298 71.833 101.491 1.00 38.37 O
ATOM 4 OP2 A B2148 48.803 71.201 103.465 1.00 39.70 O
ATOM 5 O5' A B2148 50.961 70.038 103.116 1.00 36.75 O
ATOM 6 C5' A B2148 52.304 69.876 102.627 1.00 37.05 C
ATOM 7 C4' A B2148 52.544 68.436 102.234 1.00 37.67 C
ATOM 8 O4' A B2148 52.438 67.581 103.407 1.00 38.46 O
ATOM 9 C3' A B2148 51.524 67.861 101.267 1.00 36.91 C
ATOM 10 O3' A B2148 51.809 68.217 99.921 1.00 36.55 O
ATOM 11 C2' A B2148 51.634 66.365 101.534 1.00 38.02 C
ATOM 12 O2' A B2148 52.747 65.745 100.917 1.00 39.76 O
ATOM 13 C1' A B2148 51.817 66.354 103.054 1.00 38.35 C
ATOM 14 N9 A B2148 50.527 66.285 103.742 1.00 38.30 N
ATOM 15 C8 A B2148 49.827 67.317 104.317 1.00 38.36 C
ATOM 16 N7 A B2148 48.671 66.959 104.818 1.00 39.37 N
ATOM 17 C5 A B2148 48.606 65.596 104.565 1.00 38.50 C
ATOM 18 C6 A B2148 47.625 64.631 104.848 1.00 38.75 C
ATOM 19 N6 A B2148 46.468 64.908 105.458 1.00 35.79 N
ATOM 20 N1 A B2148 47.876 63.356 104.473 1.00 39.02 N
ATOM 21 C2 A B2148 49.033 63.085 103.845 1.00 38.95 C
ATOM 22 N3 A B2148 50.026 63.907 103.518 1.00 38.40 N
ATOM 23 C4 A B2148 49.749 65.163 103.913 1.00 38.52 C
ATOM 24 P A B2149 50.650 68.844 99.000 1.00 34.78 P
ATOM 25 OP1 A B2149 50.924 70.287 98.830 1.00 32.86 O
ATOM 26 OP2 A B2149 49.341 68.407 99.528 1.00 34.08 O
ATOM 27 O5' A B2149 50.876 68.157 97.586 1.00 34.69 O
TER
Atoms:
OP1: (41.587,62.593,107.247)
OP2: (43.769,63.396,106.194)
C3': (41.202,67.711,107.855)
C1': (43.097,68.412,109.074)
C5': (41.443,65.255,108.644)
O4': (42.784,67.086,109.476)
C8: (44.709,67.248,107.470)
O2': (41.049,69.621,109.382)
C6: (46.708,69.799,106.135)
C5: (45.838,68.896,106.757)
C4: (44.947,69.414,107.679)
P: (42.809,63.438,107.314)
C4': (41.470,66.726,108.982)
C2': (41.843,68.978,108.405)
C2: (45.702,71.451,107.398)
N1: (46.615,71.097,106.485)
N3: (44.827,70.696,108.050)
N6: (47.615,69.444,105.222)
N7: (45.680,67.522,106.637)
N9: (44.208,68.351,108.123)
O5': (42.382,64.949,107.597)
O3': (39.808,67.914,107.670)
OP2: (43.769,63.396,106.194)
C3': (41.202,67.711,107.855)
C1': (43.097,68.412,109.074)
C5': (41.443,65.255,108.644)
O4': (42.784,67.086,109.476)
C8: (44.709,67.248,107.470)
O2': (41.049,69.621,109.382)
C6: (46.708,69.799,106.135)
C5: (45.838,68.896,106.757)
C4: (44.947,69.414,107.679)
P: (42.809,63.438,107.314)
C4': (41.470,66.726,108.982)
C2': (41.843,68.978,108.405)
C2: (45.702,71.451,107.398)
N1: (46.615,71.097,106.485)
N3: (44.827,70.696,108.050)
N6: (47.615,69.444,105.222)
N7: (45.680,67.522,106.637)
N9: (44.208,68.351,108.123)
O5': (42.382,64.949,107.597)
O3': (39.808,67.914,107.670)
OP1: (50.298,71.833,101.491)
OP2: (48.803,71.201,103.465)
C3': (51.524,67.861,101.267)
C1': (51.817,66.354,103.054)
C5': (52.304,69.876,102.627)
O4': (52.438,67.581,103.407)
C8: (49.827,67.317,104.317)
O2': (52.747,65.745,100.917)
C6: (47.625,64.631,104.848)
C5: (48.606,65.596,104.565)
C4: (49.749,65.163,103.913)
P: (50.154,71.394,102.897)
C4': (52.544,68.436,102.234)
C2': (51.634,66.365,101.534)
C2: (49.033,63.085,103.845)
N1: (47.876,63.356,104.473)
N3: (50.026,63.907,103.518)
N6: (46.468,64.908,105.458)
N7: (48.671,66.959,104.818)
N9: (50.527,66.285,103.742)
O5': (50.961,70.038,103.116)
O3': (51.809,68.217,99.921)
OP2: (48.803,71.201,103.465)
C3': (51.524,67.861,101.267)
C1': (51.817,66.354,103.054)
C5': (52.304,69.876,102.627)
O4': (52.438,67.581,103.407)
C8: (49.827,67.317,104.317)
O2': (52.747,65.745,100.917)
C6: (47.625,64.631,104.848)
C5: (48.606,65.596,104.565)
C4: (49.749,65.163,103.913)
P: (50.154,71.394,102.897)
C4': (52.544,68.436,102.234)
C2': (51.634,66.365,101.534)
C2: (49.033,63.085,103.845)
N1: (47.876,63.356,104.473)
N3: (50.026,63.907,103.518)
N6: (46.468,64.908,105.458)
N7: (48.671,66.959,104.818)
N9: (50.527,66.285,103.742)
O5': (50.961,70.038,103.116)
O3': (51.809,68.217,99.921)
Image (generated by PyMOL):