ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1AQ3:R8:R6

Extra

PDB:
ATOM 1 O3' U A 7 22.297 104.249 18.389 0.70 48.86 O
ATOM 2 P U A 8 21.356 105.425 18.988 0.70 49.86 P
ATOM 3 OP1 U A 8 20.227 105.594 18.004 0.70 51.03 O
ATOM 4 OP2 U A 8 22.217 106.609 19.335 0.70 48.52 O
ATOM 5 O5' U A 8 20.752 104.831 20.346 0.70 45.83 O
ATOM 6 C5' U A 8 19.436 104.256 20.367 0.70 39.89 C
ATOM 7 C4' U A 8 18.731 104.599 21.658 0.70 36.54 C
ATOM 8 O4' U A 8 19.517 104.079 22.765 0.70 33.90 O
ATOM 9 C3' U A 8 18.465 106.075 21.940 0.70 35.84 C
ATOM 10 O3' U A 8 17.143 106.215 22.491 0.70 39.25 O
ATOM 11 C2' U A 8 19.529 106.440 22.982 0.70 33.68 C
ATOM 12 O2' U A 8 19.018 107.394 23.903 0.70 34.53 O
ATOM 13 C1' U A 8 19.767 105.104 23.696 0.70 31.95 C
ATOM 14 N1 U A 8 21.134 104.911 24.211 0.70 27.74 N
ATOM 15 C2 U A 8 21.380 105.260 25.526 0.70 27.45 C
ATOM 16 O2 U A 8 20.533 105.750 26.253 0.70 28.01 O
ATOM 17 N3 U A 8 22.660 105.021 25.966 0.70 25.79 N
ATOM 18 C4 U A 8 23.705 104.484 25.233 0.70 28.51 C
ATOM 19 O4 U A 8 24.781 104.252 25.795 0.70 26.16 O
ATOM 20 C5 U A 8 23.381 104.173 23.869 0.70 27.54 C
ATOM 21 C6 U A 8 22.134 104.390 23.417 0.70 27.48 C
ATOM 22 P A A 9 15.890 106.553 21.521 0.70 39.35 P
ATOM 23 OP1 A A 9 16.039 105.823 20.225 0.70 38.82 O
ATOM 24 OP2 A A 9 15.685 108.042 21.504 0.70 40.58 O
ATOM 25 O5' A A 9 14.644 105.953 22.317 0.70 39.04 O
TER

ATOM 1 O3' G B 5 27.753 98.572 27.288 0.70 34.69 O
ATOM 2 P A B 6 27.733 100.130 26.889 0.70 35.04 P
ATOM 3 OP1 A B 6 29.084 100.512 26.393 0.70 35.49 O
ATOM 4 OP2 A B 6 27.121 100.892 28.025 0.70 36.26 O
ATOM 5 O5' A B 6 26.720 100.205 25.664 0.70 37.31 O
ATOM 6 C5' A B 6 26.856 99.307 24.543 0.70 39.00 C
ATOM 7 C4' A B 6 25.685 99.471 23.603 0.70 40.05 C
ATOM 8 O4' A B 6 24.457 99.110 24.287 0.70 39.63 O
ATOM 9 C3' A B 6 25.456 100.892 23.109 0.70 42.25 C
ATOM 10 O3' A B 6 26.269 101.149 21.960 0.70 44.91 O
ATOM 11 C2' A B 6 23.952 100.936 22.819 0.70 39.49 C
ATOM 12 O2' A B 6 23.550 100.485 21.545 0.70 40.99 O
ATOM 13 C1' A B 6 23.400 99.941 23.837 0.70 37.81 C
ATOM 14 N9 A B 6 22.787 100.596 24.985 0.70 35.32 N
ATOM 15 C8 A B 6 23.289 100.785 26.254 0.70 34.86 C
ATOM 16 N7 A B 6 22.464 101.407 27.061 0.70 34.61 N
ATOM 17 C5 A B 6 21.348 101.648 26.265 0.70 32.51 C
ATOM 18 C6 A B 6 20.125 102.268 26.533 0.70 31.06 C
ATOM 19 N6 A B 6 19.817 102.794 27.720 0.70 30.63 N
ATOM 20 N1 A B 6 19.216 102.336 25.528 0.70 32.48 N
ATOM 21 C2 A B 6 19.544 101.815 24.327 0.70 32.97 C
ATOM 22 N3 A B 6 20.673 101.212 23.952 0.70 33.22 N
ATOM 23 C4 A B 6 21.538 101.158 24.985 0.70 33.37 C
ATOM 24 P U B 7 26.783 102.651 21.665 0.70 46.93 P
ATOM 25 OP1 U B 7 27.974 102.535 20.737 0.70 44.49 O
ATOM 26 OP2 U B 7 26.925 103.380 22.981 0.70 46.36 O
ATOM 27 O5' U B 7 25.538 103.297 20.896 0.70 46.89 O
TER

Atoms:
C4: (23.705,104.484,25.233)
N3: (22.660,105.021,25.966)
OP1: (20.227,105.594,18.004)
OP2: (22.217,106.609,19.335)
C2: (21.380,105.260,25.526)
C1': (19.767,105.104,23.696)
C3': (18.465,106.075,21.940)
O5': (20.752,104.831,20.346)
O4': (19.517,104.079,22.765)
C5': (19.436,104.256,20.367)
P: (21.356,105.425,18.988)
C4': (18.731,104.599,21.658)
C2': (19.529,106.440,22.982)
O2': (19.018,107.394,23.903)
N1: (21.134,104.911,24.211)
O4: (24.781,104.252,25.795)
O2: (20.533,105.750,26.253)
C6: (22.134,104.390,23.417)
C5: (23.381,104.173,23.869)
O3': (17.143,106.215,22.491)
OP1: (29.084,100.512,26.393)
OP2: (27.121,100.892,28.025)
C3': (25.456,100.892,23.109)
C1': (23.400,99.941,23.837)
C5': (26.856,99.307,24.543)
O4': (24.457,99.110,24.287)
C8: (23.289,100.785,26.254)
O2': (23.550,100.485,21.545)
C6: (20.125,102.268,26.533)
C5: (21.348,101.648,26.265)
C4: (21.538,101.158,24.985)
P: (27.733,100.130,26.889)
C4': (25.685,99.471,23.603)
C2': (23.952,100.936,22.819)
C2: (19.544,101.815,24.327)
N1: (19.216,102.336,25.528)
N3: (20.673,101.212,23.952)
N6: (19.817,102.794,27.720)
N7: (22.464,101.407,27.061)
N9: (22.787,100.596,24.985)
O5': (26.720,100.205,25.664)
O3': (26.269,101.149,21.960)
Image (generated by PyMOL):
PyMOL image
show in jmol