Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1492:A1616
Extra
PDB:
ATOM 1 O3' G A1491 105.687 167.958 55.878 1.00 57.22 O
ATOM 2 P A A1492 105.489 166.884 57.053 1.00 56.08 P
ATOM 3 OP1 A A1492 105.008 165.648 56.377 1.00 57.49 O
ATOM 4 OP2 A A1492 104.692 167.489 58.153 1.00 55.08 O
ATOM 5 O5' A A1492 106.967 166.648 57.596 1.00 55.85 O
ATOM 6 C5' A A1492 107.209 166.165 58.920 1.00 54.99 C
ATOM 7 C4' A A1492 108.492 165.382 58.941 1.00 56.12 C
ATOM 8 O4' A A1492 108.370 164.288 57.995 1.00 55.42 O
ATOM 9 C3' A A1492 109.746 166.142 58.507 1.00 57.94 C
ATOM 10 O3' A A1492 110.872 165.523 59.116 1.00 61.27 O
ATOM 11 C2' A A1492 109.814 165.842 57.020 1.00 56.57 C
ATOM 12 O2' A A1492 111.106 165.962 56.454 1.00 57.35 O
ATOM 13 C1' A A1492 109.403 164.381 57.040 1.00 54.94 C
ATOM 14 N9 A A1492 108.907 163.899 55.767 1.00 52.72 N
ATOM 15 C8 A A1492 107.767 164.239 55.089 1.00 52.17 C
ATOM 16 N7 A A1492 107.600 163.566 53.978 1.00 50.91 N
ATOM 17 C5 A A1492 108.712 162.738 53.923 1.00 50.57 C
ATOM 18 C6 A A1492 109.115 161.768 53.005 1.00 50.02 C
ATOM 19 N6 A A1492 108.412 161.448 51.920 1.00 50.68 N
ATOM 20 N1 A A1492 110.277 161.126 53.241 1.00 50.21 N
ATOM 21 C2 A A1492 110.974 161.446 54.338 1.00 50.51 C
ATOM 22 N3 A A1492 110.692 162.333 55.282 1.00 50.30 N
ATOM 23 C4 A A1492 109.532 162.950 55.010 1.00 51.20 C
ATOM 24 P C A1493 111.506 166.171 60.428 1.00 63.33 P
ATOM 25 OP1 C A1493 110.787 167.455 60.663 1.00 62.06 O
ATOM 26 OP2 C A1493 112.977 166.161 60.254 1.00 64.19 O
ATOM 27 O5' C A1493 111.081 165.204 61.619 1.00 62.48 O
TER
ATOM 1 O3' A B1615 107.759 156.729 50.501 1.00 48.64 O
ATOM 2 P A B1616 108.451 157.784 49.538 1.00 47.55 P
ATOM 3 OP1 A B1616 109.331 157.014 48.619 1.00 46.71 O
ATOM 4 OP2 A B1616 109.023 158.864 50.378 1.00 47.26 O
ATOM 5 O5' A B1616 107.223 158.388 48.729 1.00 46.79 O
ATOM 6 C5' A B1616 106.585 157.645 47.680 1.00 46.63 C
ATOM 7 C4' A B1616 105.236 158.235 47.404 1.00 45.68 C
ATOM 8 O4' A B1616 104.574 158.370 48.685 1.00 45.72 O
ATOM 9 C3' A B1616 105.248 159.662 46.880 1.00 46.38 C
ATOM 10 O3' A B1616 105.449 159.731 45.470 1.00 47.26 O
ATOM 11 C2' A B1616 103.877 160.159 47.300 1.00 45.75 C
ATOM 12 O2' A B1616 102.870 159.641 46.454 1.00 45.82 O
ATOM 13 C1' A B1616 103.773 159.544 48.697 1.00 46.51 C
ATOM 14 N9 A B1616 104.282 160.447 49.738 1.00 48.01 N
ATOM 15 C8 A B1616 105.560 160.540 50.263 1.00 47.78 C
ATOM 16 N7 A B1616 105.703 161.511 51.137 1.00 49.48 N
ATOM 17 C5 A B1616 104.441 162.089 51.207 1.00 49.24 C
ATOM 18 C6 A B1616 103.942 163.194 51.941 1.00 50.21 C
ATOM 19 N6 A B1616 104.688 163.952 52.756 1.00 48.34 N
ATOM 20 N1 A B1616 102.635 163.504 51.796 1.00 50.55 N
ATOM 21 C2 A B1616 101.892 162.766 50.962 1.00 50.66 C
ATOM 22 N3 A B1616 102.247 161.720 50.204 1.00 49.38 N
ATOM 23 C4 A B1616 103.550 161.429 50.372 1.00 48.54 C
ATOM 24 P A B1617 105.969 161.104 44.795 1.00 47.51 P
ATOM 25 OP1 A B1617 106.273 160.801 43.372 1.00 47.57 O
ATOM 26 OP2 A B1617 107.007 161.744 45.653 1.00 46.38 O
ATOM 27 O5' A B1617 104.682 162.022 44.786 1.00 44.30 O
TER
ATOM 2 P A A1492 105.489 166.884 57.053 1.00 56.08 P
ATOM 3 OP1 A A1492 105.008 165.648 56.377 1.00 57.49 O
ATOM 4 OP2 A A1492 104.692 167.489 58.153 1.00 55.08 O
ATOM 5 O5' A A1492 106.967 166.648 57.596 1.00 55.85 O
ATOM 6 C5' A A1492 107.209 166.165 58.920 1.00 54.99 C
ATOM 7 C4' A A1492 108.492 165.382 58.941 1.00 56.12 C
ATOM 8 O4' A A1492 108.370 164.288 57.995 1.00 55.42 O
ATOM 9 C3' A A1492 109.746 166.142 58.507 1.00 57.94 C
ATOM 10 O3' A A1492 110.872 165.523 59.116 1.00 61.27 O
ATOM 11 C2' A A1492 109.814 165.842 57.020 1.00 56.57 C
ATOM 12 O2' A A1492 111.106 165.962 56.454 1.00 57.35 O
ATOM 13 C1' A A1492 109.403 164.381 57.040 1.00 54.94 C
ATOM 14 N9 A A1492 108.907 163.899 55.767 1.00 52.72 N
ATOM 15 C8 A A1492 107.767 164.239 55.089 1.00 52.17 C
ATOM 16 N7 A A1492 107.600 163.566 53.978 1.00 50.91 N
ATOM 17 C5 A A1492 108.712 162.738 53.923 1.00 50.57 C
ATOM 18 C6 A A1492 109.115 161.768 53.005 1.00 50.02 C
ATOM 19 N6 A A1492 108.412 161.448 51.920 1.00 50.68 N
ATOM 20 N1 A A1492 110.277 161.126 53.241 1.00 50.21 N
ATOM 21 C2 A A1492 110.974 161.446 54.338 1.00 50.51 C
ATOM 22 N3 A A1492 110.692 162.333 55.282 1.00 50.30 N
ATOM 23 C4 A A1492 109.532 162.950 55.010 1.00 51.20 C
ATOM 24 P C A1493 111.506 166.171 60.428 1.00 63.33 P
ATOM 25 OP1 C A1493 110.787 167.455 60.663 1.00 62.06 O
ATOM 26 OP2 C A1493 112.977 166.161 60.254 1.00 64.19 O
ATOM 27 O5' C A1493 111.081 165.204 61.619 1.00 62.48 O
TER
ATOM 1 O3' A B1615 107.759 156.729 50.501 1.00 48.64 O
ATOM 2 P A B1616 108.451 157.784 49.538 1.00 47.55 P
ATOM 3 OP1 A B1616 109.331 157.014 48.619 1.00 46.71 O
ATOM 4 OP2 A B1616 109.023 158.864 50.378 1.00 47.26 O
ATOM 5 O5' A B1616 107.223 158.388 48.729 1.00 46.79 O
ATOM 6 C5' A B1616 106.585 157.645 47.680 1.00 46.63 C
ATOM 7 C4' A B1616 105.236 158.235 47.404 1.00 45.68 C
ATOM 8 O4' A B1616 104.574 158.370 48.685 1.00 45.72 O
ATOM 9 C3' A B1616 105.248 159.662 46.880 1.00 46.38 C
ATOM 10 O3' A B1616 105.449 159.731 45.470 1.00 47.26 O
ATOM 11 C2' A B1616 103.877 160.159 47.300 1.00 45.75 C
ATOM 12 O2' A B1616 102.870 159.641 46.454 1.00 45.82 O
ATOM 13 C1' A B1616 103.773 159.544 48.697 1.00 46.51 C
ATOM 14 N9 A B1616 104.282 160.447 49.738 1.00 48.01 N
ATOM 15 C8 A B1616 105.560 160.540 50.263 1.00 47.78 C
ATOM 16 N7 A B1616 105.703 161.511 51.137 1.00 49.48 N
ATOM 17 C5 A B1616 104.441 162.089 51.207 1.00 49.24 C
ATOM 18 C6 A B1616 103.942 163.194 51.941 1.00 50.21 C
ATOM 19 N6 A B1616 104.688 163.952 52.756 1.00 48.34 N
ATOM 20 N1 A B1616 102.635 163.504 51.796 1.00 50.55 N
ATOM 21 C2 A B1616 101.892 162.766 50.962 1.00 50.66 C
ATOM 22 N3 A B1616 102.247 161.720 50.204 1.00 49.38 N
ATOM 23 C4 A B1616 103.550 161.429 50.372 1.00 48.54 C
ATOM 24 P A B1617 105.969 161.104 44.795 1.00 47.51 P
ATOM 25 OP1 A B1617 106.273 160.801 43.372 1.00 47.57 O
ATOM 26 OP2 A B1617 107.007 161.744 45.653 1.00 46.38 O
ATOM 27 O5' A B1617 104.682 162.022 44.786 1.00 44.30 O
TER
Atoms:
OP1: (105.008,165.648,56.377)
OP2: (104.692,167.489,58.153)
C3': (109.746,166.142,58.507)
C1': (109.403,164.381,57.040)
C5': (107.209,166.165,58.920)
O4': (108.370,164.288,57.995)
C8: (107.767,164.239,55.089)
O2': (111.106,165.962,56.454)
C6: (109.115,161.768,53.005)
C5: (108.712,162.738,53.923)
C4: (109.532,162.950,55.010)
P: (105.489,166.884,57.053)
C4': (108.492,165.382,58.941)
C2': (109.814,165.842,57.020)
C2: (110.974,161.446,54.338)
N1: (110.277,161.126,53.241)
N3: (110.692,162.333,55.282)
N6: (108.412,161.448,51.920)
N7: (107.600,163.566,53.978)
N9: (108.907,163.899,55.767)
O5': (106.967,166.648,57.596)
O3': (110.872,165.523,59.116)
OP2: (104.692,167.489,58.153)
C3': (109.746,166.142,58.507)
C1': (109.403,164.381,57.040)
C5': (107.209,166.165,58.920)
O4': (108.370,164.288,57.995)
C8: (107.767,164.239,55.089)
O2': (111.106,165.962,56.454)
C6: (109.115,161.768,53.005)
C5: (108.712,162.738,53.923)
C4: (109.532,162.950,55.010)
P: (105.489,166.884,57.053)
C4': (108.492,165.382,58.941)
C2': (109.814,165.842,57.020)
C2: (110.974,161.446,54.338)
N1: (110.277,161.126,53.241)
N3: (110.692,162.333,55.282)
N6: (108.412,161.448,51.920)
N7: (107.600,163.566,53.978)
N9: (108.907,163.899,55.767)
O5': (106.967,166.648,57.596)
O3': (110.872,165.523,59.116)
OP1: (109.331,157.014,48.619)
OP2: (109.023,158.864,50.378)
C3': (105.248,159.662,46.880)
C1': (103.773,159.544,48.697)
C5': (106.585,157.645,47.680)
O4': (104.574,158.370,48.685)
C8: (105.560,160.540,50.263)
O2': (102.870,159.641,46.454)
C6: (103.942,163.194,51.941)
C5: (104.441,162.089,51.207)
C4: (103.550,161.429,50.372)
P: (108.451,157.784,49.538)
C4': (105.236,158.235,47.404)
C2': (103.877,160.159,47.300)
C2: (101.892,162.766,50.962)
N1: (102.635,163.504,51.796)
N3: (102.247,161.720,50.204)
N6: (104.688,163.952,52.756)
N7: (105.703,161.511,51.137)
N9: (104.282,160.447,49.738)
O5': (107.223,158.388,48.729)
O3': (105.449,159.731,45.470)
OP2: (109.023,158.864,50.378)
C3': (105.248,159.662,46.880)
C1': (103.773,159.544,48.697)
C5': (106.585,157.645,47.680)
O4': (104.574,158.370,48.685)
C8: (105.560,160.540,50.263)
O2': (102.870,159.641,46.454)
C6: (103.942,163.194,51.941)
C5: (104.441,162.089,51.207)
C4: (103.550,161.429,50.372)
P: (108.451,157.784,49.538)
C4': (105.236,158.235,47.404)
C2': (103.877,160.159,47.300)
C2: (101.892,162.766,50.962)
N1: (102.635,163.504,51.796)
N3: (102.247,161.720,50.204)
N6: (104.688,163.952,52.756)
N7: (105.703,161.511,51.137)
N9: (104.282,160.447,49.738)
O5': (107.223,158.388,48.729)
O3': (105.449,159.731,45.470)
Image (generated by PyMOL):