Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A12:A525
Extra
PDB:
ATOM 1 O3' U A 11 -51.504-108.453 -13.882 1.00 29.32 O
ATOM 2 P A A 12 -51.099-107.522 -12.634 1.00 0.01 P
ATOM 3 OP1 A A 12 -49.622-107.571 -12.553 1.00 0.01 O
ATOM 4 OP2 A A 12 -51.900-107.972 -11.459 1.00 0.01 O
ATOM 5 O5' A A 12 -51.559-106.060 -13.052 1.00 0.01 O
ATOM 6 C5' A A 12 -50.660-104.972 -12.874 1.00 0.01 C
ATOM 7 C4' A A 12 -51.296-103.788 -12.198 1.00 0.01 C
ATOM 8 O4' A A 12 -52.689-103.728 -12.556 1.00 0.01 O
ATOM 9 C3' A A 12 -51.241-103.768 -10.671 1.00 0.01 C
ATOM 10 O3' A A 12 -50.906-102.457 -10.216 1.00 0.01 O
ATOM 11 C2' A A 12 -52.672-104.083 -10.261 1.00 0.01 C
ATOM 12 O2' A A 12 -53.052-103.515 -9.040 1.00 0.01 O
ATOM 13 C1' A A 12 -53.455-103.475 -11.403 1.00 0.01 C
ATOM 14 N9 A A 12 -54.779-104.053 -11.613 1.00 0.01 N
ATOM 15 C8 A A 12 -54.962-105.297 -12.118 1.00 0.01 C
ATOM 16 N7 A A 12 -56.219-105.616 -12.270 1.00 0.01 N
ATOM 17 C5 A A 12 -56.898-104.506 -11.875 1.00 0.01 C
ATOM 18 C6 A A 12 -58.246-104.301 -11.826 1.00 0.01 C
ATOM 19 N6 A A 12 -59.123-105.210 -12.216 1.00 0.01 N
ATOM 20 N1 A A 12 -58.659-103.141 -11.370 1.00 0.01 N
ATOM 21 C2 A A 12 -57.729-102.276 -11.016 1.00 0.01 C
ATOM 22 N3 A A 12 -56.412-102.373 -11.013 1.00 0.01 N
ATOM 23 C4 A A 12 -56.042-103.539 -11.472 1.00 0.01 C
ATOM 24 P A A 13 -49.386-101.953 -10.262 1.00 0.01 P
ATOM 25 OP1 A A 13 -48.572-103.091 -10.718 1.00 0.01 O
ATOM 26 OP2 A A 13 -49.082-101.339 -8.978 1.00 0.01 O
ATOM 27 O5' A A 13 -49.415-100.840 -11.374 1.00 0.01 O
TER
ATOM 1 O3' U B 524 -63.512-103.356 -11.701 1.00 0.01 O
ATOM 2 P A B 525 -62.946-103.717 -13.133 1.00 0.01 P
ATOM 3 OP1 A B 525 -64.067-103.831 -14.020 1.00 0.01 O
ATOM 4 OP2 A B 525 -62.072-104.852 -12.974 1.00 0.01 O
ATOM 5 O5' A B 525 -62.104-102.453 -13.510 1.00 0.01 O
ATOM 6 C5' A B 525 -62.696-101.169 -13.555 1.00 0.01 C
ATOM 7 C4' A B 525 -61.960-100.261 -14.507 1.00 0.01 C
ATOM 8 O4' A B 525 -60.604-100.100 -14.067 1.00 0.01 O
ATOM 9 C3' A B 525 -61.838-100.752 -15.927 1.00 0.01 C
ATOM 10 O3' A B 525 -62.973-100.412 -16.700 1.00 0.01 O
ATOM 11 C2' A B 525 -60.548-100.104 -16.430 1.00 0.01 C
ATOM 12 O2' A B 525 -60.834 -98.870 -17.045 1.00 0.01 O
ATOM 13 C1' A B 525 -59.778 -99.822 -15.153 1.00 0.01 C
ATOM 14 N9 A B 525 -58.547-100.588 -14.981 1.00 0.01 N
ATOM 15 C8 A B 525 -58.436-101.807 -14.429 1.00 0.01 C
ATOM 16 N7 A B 525 -57.208-102.217 -14.238 1.00 0.01 N
ATOM 17 C5 A B 525 -56.446-101.144 -14.636 1.00 0.01 C
ATOM 18 C6 A B 525 -55.066-100.924 -14.668 1.00 0.01 C
ATOM 19 N6 A B 525 -54.100-101.761 -14.310 1.00 0.01 N
ATOM 20 N1 A B 525 -54.670 -99.757 -15.102 1.00 0.01 N
ATOM 21 C2 A B 525 -55.585 -98.883 -15.470 1.00 0.01 C
ATOM 22 N3 A B 525 -56.890 -98.973 -15.491 1.00 0.01 N
ATOM 23 C4 A B 525 -57.271-100.141 -15.051 1.00 0.01 C
ATOM 24 P C B 526 -63.820-101.554 -17.421 1.00 0.01 P
ATOM 25 OP1 C B 526 -64.148-102.525 -16.415 1.00 0.01 O
ATOM 26 OP2 C B 526 -63.065-101.980 -18.585 1.00 0.01 O
ATOM 27 O5' C B 526 -65.129-100.804 -17.872 1.00 0.01 O
TER
ATOM 2 P A A 12 -51.099-107.522 -12.634 1.00 0.01 P
ATOM 3 OP1 A A 12 -49.622-107.571 -12.553 1.00 0.01 O
ATOM 4 OP2 A A 12 -51.900-107.972 -11.459 1.00 0.01 O
ATOM 5 O5' A A 12 -51.559-106.060 -13.052 1.00 0.01 O
ATOM 6 C5' A A 12 -50.660-104.972 -12.874 1.00 0.01 C
ATOM 7 C4' A A 12 -51.296-103.788 -12.198 1.00 0.01 C
ATOM 8 O4' A A 12 -52.689-103.728 -12.556 1.00 0.01 O
ATOM 9 C3' A A 12 -51.241-103.768 -10.671 1.00 0.01 C
ATOM 10 O3' A A 12 -50.906-102.457 -10.216 1.00 0.01 O
ATOM 11 C2' A A 12 -52.672-104.083 -10.261 1.00 0.01 C
ATOM 12 O2' A A 12 -53.052-103.515 -9.040 1.00 0.01 O
ATOM 13 C1' A A 12 -53.455-103.475 -11.403 1.00 0.01 C
ATOM 14 N9 A A 12 -54.779-104.053 -11.613 1.00 0.01 N
ATOM 15 C8 A A 12 -54.962-105.297 -12.118 1.00 0.01 C
ATOM 16 N7 A A 12 -56.219-105.616 -12.270 1.00 0.01 N
ATOM 17 C5 A A 12 -56.898-104.506 -11.875 1.00 0.01 C
ATOM 18 C6 A A 12 -58.246-104.301 -11.826 1.00 0.01 C
ATOM 19 N6 A A 12 -59.123-105.210 -12.216 1.00 0.01 N
ATOM 20 N1 A A 12 -58.659-103.141 -11.370 1.00 0.01 N
ATOM 21 C2 A A 12 -57.729-102.276 -11.016 1.00 0.01 C
ATOM 22 N3 A A 12 -56.412-102.373 -11.013 1.00 0.01 N
ATOM 23 C4 A A 12 -56.042-103.539 -11.472 1.00 0.01 C
ATOM 24 P A A 13 -49.386-101.953 -10.262 1.00 0.01 P
ATOM 25 OP1 A A 13 -48.572-103.091 -10.718 1.00 0.01 O
ATOM 26 OP2 A A 13 -49.082-101.339 -8.978 1.00 0.01 O
ATOM 27 O5' A A 13 -49.415-100.840 -11.374 1.00 0.01 O
TER
ATOM 1 O3' U B 524 -63.512-103.356 -11.701 1.00 0.01 O
ATOM 2 P A B 525 -62.946-103.717 -13.133 1.00 0.01 P
ATOM 3 OP1 A B 525 -64.067-103.831 -14.020 1.00 0.01 O
ATOM 4 OP2 A B 525 -62.072-104.852 -12.974 1.00 0.01 O
ATOM 5 O5' A B 525 -62.104-102.453 -13.510 1.00 0.01 O
ATOM 6 C5' A B 525 -62.696-101.169 -13.555 1.00 0.01 C
ATOM 7 C4' A B 525 -61.960-100.261 -14.507 1.00 0.01 C
ATOM 8 O4' A B 525 -60.604-100.100 -14.067 1.00 0.01 O
ATOM 9 C3' A B 525 -61.838-100.752 -15.927 1.00 0.01 C
ATOM 10 O3' A B 525 -62.973-100.412 -16.700 1.00 0.01 O
ATOM 11 C2' A B 525 -60.548-100.104 -16.430 1.00 0.01 C
ATOM 12 O2' A B 525 -60.834 -98.870 -17.045 1.00 0.01 O
ATOM 13 C1' A B 525 -59.778 -99.822 -15.153 1.00 0.01 C
ATOM 14 N9 A B 525 -58.547-100.588 -14.981 1.00 0.01 N
ATOM 15 C8 A B 525 -58.436-101.807 -14.429 1.00 0.01 C
ATOM 16 N7 A B 525 -57.208-102.217 -14.238 1.00 0.01 N
ATOM 17 C5 A B 525 -56.446-101.144 -14.636 1.00 0.01 C
ATOM 18 C6 A B 525 -55.066-100.924 -14.668 1.00 0.01 C
ATOM 19 N6 A B 525 -54.100-101.761 -14.310 1.00 0.01 N
ATOM 20 N1 A B 525 -54.670 -99.757 -15.102 1.00 0.01 N
ATOM 21 C2 A B 525 -55.585 -98.883 -15.470 1.00 0.01 C
ATOM 22 N3 A B 525 -56.890 -98.973 -15.491 1.00 0.01 N
ATOM 23 C4 A B 525 -57.271-100.141 -15.051 1.00 0.01 C
ATOM 24 P C B 526 -63.820-101.554 -17.421 1.00 0.01 P
ATOM 25 OP1 C B 526 -64.148-102.525 -16.415 1.00 0.01 O
ATOM 26 OP2 C B 526 -63.065-101.980 -18.585 1.00 0.01 O
ATOM 27 O5' C B 526 -65.129-100.804 -17.872 1.00 0.01 O
TER
Atoms:
OP1: (-49.622,-107.571,-12.553)
OP2: (-51.900,-107.972,-11.459)
C3': (-51.241,-103.768,-10.671)
C1': (-53.455,-103.475,-11.403)
C5': (-50.660,-104.972,-12.874)
O4': (-52.689,-103.728,-12.556)
C8: (-54.962,-105.297,-12.118)
O2': (-53.052,-103.515,-9.040)
C6: (-58.246,-104.301,-11.826)
C5: (-56.898,-104.506,-11.875)
C4: (-56.042,-103.539,-11.472)
P: (-51.099,-107.522,-12.634)
C4': (-51.296,-103.788,-12.198)
C2': (-52.672,-104.083,-10.261)
C2: (-57.729,-102.276,-11.016)
N1: (-58.659,-103.141,-11.370)
N3: (-56.412,-102.373,-11.013)
N6: (-59.123,-105.210,-12.216)
N7: (-56.219,-105.616,-12.270)
N9: (-54.779,-104.053,-11.613)
O5': (-51.559,-106.060,-13.052)
O3': (-50.906,-102.457,-10.216)
OP2: (-51.900,-107.972,-11.459)
C3': (-51.241,-103.768,-10.671)
C1': (-53.455,-103.475,-11.403)
C5': (-50.660,-104.972,-12.874)
O4': (-52.689,-103.728,-12.556)
C8: (-54.962,-105.297,-12.118)
O2': (-53.052,-103.515,-9.040)
C6: (-58.246,-104.301,-11.826)
C5: (-56.898,-104.506,-11.875)
C4: (-56.042,-103.539,-11.472)
P: (-51.099,-107.522,-12.634)
C4': (-51.296,-103.788,-12.198)
C2': (-52.672,-104.083,-10.261)
C2: (-57.729,-102.276,-11.016)
N1: (-58.659,-103.141,-11.370)
N3: (-56.412,-102.373,-11.013)
N6: (-59.123,-105.210,-12.216)
N7: (-56.219,-105.616,-12.270)
N9: (-54.779,-104.053,-11.613)
O5': (-51.559,-106.060,-13.052)
O3': (-50.906,-102.457,-10.216)
OP1: (-64.067,-103.831,-14.020)
OP2: (-62.072,-104.852,-12.974)
C3': (-61.838,-100.752,-15.927)
C1': (-59.778,-99.822,-15.153)
C5': (-62.696,-101.169,-13.555)
O4': (-60.604,-100.100,-14.067)
C8: (-58.436,-101.807,-14.429)
O2': (-60.834,-98.870,-17.045)
C6: (-55.066,-100.924,-14.668)
C5: (-56.446,-101.144,-14.636)
C4: (-57.271,-100.141,-15.051)
P: (-62.946,-103.717,-13.133)
C4': (-61.960,-100.261,-14.507)
C2': (-60.548,-100.104,-16.430)
C2: (-55.585,-98.883,-15.470)
N1: (-54.670,-99.757,-15.102)
N3: (-56.890,-98.973,-15.491)
N6: (-54.100,-101.761,-14.310)
N7: (-57.208,-102.217,-14.238)
N9: (-58.547,-100.588,-14.981)
O5': (-62.104,-102.453,-13.510)
O3': (-62.973,-100.412,-16.700)
OP2: (-62.072,-104.852,-12.974)
C3': (-61.838,-100.752,-15.927)
C1': (-59.778,-99.822,-15.153)
C5': (-62.696,-101.169,-13.555)
O4': (-60.604,-100.100,-14.067)
C8: (-58.436,-101.807,-14.429)
O2': (-60.834,-98.870,-17.045)
C6: (-55.066,-100.924,-14.668)
C5: (-56.446,-101.144,-14.636)
C4: (-57.271,-100.141,-15.051)
P: (-62.946,-103.717,-13.133)
C4': (-61.960,-100.261,-14.507)
C2': (-60.548,-100.104,-16.430)
C2: (-55.585,-98.883,-15.470)
N1: (-54.670,-99.757,-15.102)
N3: (-56.890,-98.973,-15.491)
N6: (-54.100,-101.761,-14.310)
N7: (-57.208,-102.217,-14.238)
N9: (-58.547,-100.588,-14.981)
O5': (-62.104,-102.453,-13.510)
O3': (-62.973,-100.412,-16.700)
Image (generated by PyMOL):