ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A176:A180

Extra

PDB:
ATOM 1 O3' G A 175 88.984 -55.791 -46.098 1.00 38.41 O
ATOM 2 P A A 176 90.000 -55.314 -44.924 1.00 26.90 P
ATOM 3 OP1 A A 176 90.750 -56.522 -44.487 1.00 20.54 O
ATOM 4 OP2 A A 176 89.205 -54.550 -43.905 1.00 30.49 O
ATOM 5 O5' A A 176 90.966 -54.317 -45.695 1.00 35.85 O
ATOM 6 C5' A A 176 91.260 -54.498 -47.078 1.00 39.45 C
ATOM 7 C4' A A 176 91.493 -53.175 -47.785 1.00 36.50 C
ATOM 8 O4' A A 176 90.276 -52.407 -47.807 1.00 37.76 O
ATOM 9 C3' A A 176 92.514 -52.251 -47.156 1.00 33.06 C
ATOM 10 O3' A A 176 93.825 -52.562 -47.573 1.00 44.19 O
ATOM 11 C2' A A 176 92.075 -50.871 -47.611 1.00 34.98 C
ATOM 12 O2' A A 176 92.703 -50.542 -48.845 1.00 42.00 O
ATOM 13 C1' A A 176 90.570 -51.046 -47.849 1.00 28.42 C
ATOM 14 N9 A A 176 89.761 -50.380 -46.839 1.00 22.20 N
ATOM 15 C8 A A 176 89.237 -50.940 -45.713 1.00 33.18 C
ATOM 16 N7 A A 176 88.527 -50.109 -44.989 1.00 33.90 N
ATOM 17 C5 A A 176 88.587 -48.947 -45.725 1.00 29.65 C
ATOM 18 C6 A A 176 88.023 -47.699 -45.502 1.00 32.33 C
ATOM 19 N6 A A 176 87.283 -47.462 -44.418 1.00 37.70 N
ATOM 20 N1 A A 176 88.262 -46.729 -46.417 1.00 30.19 N
ATOM 21 C2 A A 176 89.005 -47.040 -47.481 1.00 26.96 C
ATOM 22 N3 A A 176 89.571 -48.191 -47.807 1.00 23.96 N
ATOM 23 C4 A A 176 89.324 -49.101 -46.872 1.00 24.15 C
ATOM 24 P A A 177 94.778 -53.422 -46.628 1.00 43.40 P
ATOM 25 OP1 A A 177 96.171 -52.877 -46.774 1.00 34.17 O
ATOM 26 OP2 A A 177 94.522 -54.853 -46.948 1.00 36.51 O
ATOM 27 O5' A A 177 94.208 -53.059 -45.198 1.00 42.25 O
TER

ATOM 1 O3' C B 179 86.254 -43.481 -42.823 1.00 42.77 O
ATOM 2 P A B 180 85.166 -43.838 -43.941 1.00 39.37 P
ATOM 3 OP1 A B 180 83.848 -43.827 -43.271 1.00 42.17 O
ATOM 4 OP2 A B 180 85.620 -45.082 -44.601 1.00 44.43 O
ATOM 5 O5' A B 180 85.279 -42.615 -44.950 1.00 36.06 O
ATOM 6 C5' A B 180 85.341 -41.294 -44.452 1.00 41.55 C
ATOM 7 C4' A B 180 85.762 -40.309 -45.500 1.00 36.44 C
ATOM 8 O4' A B 180 86.887 -39.571 -44.993 1.00 41.34 O
ATOM 9 C3' A B 180 86.181 -40.893 -46.856 1.00 39.60 C
ATOM 10 O3' A B 180 85.583 -40.139 -47.903 1.00 42.64 O
ATOM 11 C2' A B 180 87.695 -40.676 -46.902 1.00 39.74 C
ATOM 12 O2' A B 180 88.185 -40.378 -48.192 1.00 29.49 O
ATOM 13 C1' A B 180 87.884 -39.486 -45.976 1.00 41.42 C
ATOM 14 N9 A B 180 89.191 -39.436 -45.312 1.00 36.28 N
ATOM 15 C8 A B 180 90.248 -40.304 -45.354 1.00 32.92 C
ATOM 16 N7 A B 180 91.287 -39.899 -44.647 1.00 36.12 N
ATOM 17 C5 A B 180 90.875 -38.690 -44.114 1.00 35.25 C
ATOM 18 C6 A B 180 91.471 -37.734 -43.276 1.00 37.03 C
ATOM 19 N6 A B 180 92.693 -37.790 -42.774 1.00 38.17 N
ATOM 20 N1 A B 180 90.762 -36.650 -42.928 1.00 38.12 N
ATOM 21 C2 A B 180 89.527 -36.511 -43.405 1.00 31.45 C
ATOM 22 N3 A B 180 88.868 -37.324 -44.197 1.00 34.88 N
ATOM 23 C4 A B 180 89.598 -38.400 -44.514 1.00 34.07 C
ATOM 24 P U B 181 84.687 -40.857 -49.034 1.00 30.11 P
ATOM 25 OP1 U B 181 83.506 -39.981 -49.259 1.00 30.17 O
ATOM 26 OP2 U B 181 84.467 -42.268 -48.611 1.00 34.96 O
ATOM 27 O5' U B 181 85.621 -40.825 -50.322 1.00 30.91 O
TER

Atoms:
OP1: (90.750,-56.522,-44.487)
OP2: (89.205,-54.550,-43.905)
C3': (92.514,-52.251,-47.156)
C1': (90.570,-51.046,-47.849)
C5': (91.260,-54.498,-47.078)
O4': (90.276,-52.407,-47.807)
C8: (89.237,-50.940,-45.713)
O2': (92.703,-50.542,-48.845)
C6: (88.023,-47.699,-45.502)
C5: (88.587,-48.947,-45.725)
C4: (89.324,-49.101,-46.872)
P: (90.000,-55.314,-44.924)
C4': (91.493,-53.175,-47.785)
C2': (92.075,-50.871,-47.611)
C2: (89.005,-47.040,-47.481)
N1: (88.262,-46.729,-46.417)
N3: (89.571,-48.191,-47.807)
N6: (87.283,-47.462,-44.418)
N7: (88.527,-50.109,-44.989)
N9: (89.761,-50.380,-46.839)
O5': (90.966,-54.317,-45.695)
O3': (93.825,-52.562,-47.573)
OP1: (83.848,-43.827,-43.271)
OP2: (85.620,-45.082,-44.601)
C3': (86.181,-40.893,-46.856)
C1': (87.884,-39.486,-45.976)
C5': (85.341,-41.294,-44.452)
O4': (86.887,-39.571,-44.993)
C8: (90.248,-40.304,-45.354)
O2': (88.185,-40.378,-48.192)
C6: (91.471,-37.734,-43.276)
C5: (90.875,-38.690,-44.114)
C4: (89.598,-38.400,-44.514)
P: (85.166,-43.838,-43.941)
C4': (85.762,-40.309,-45.500)
C2': (87.695,-40.676,-46.902)
C2: (89.527,-36.511,-43.405)
N1: (90.762,-36.650,-42.928)
N3: (88.868,-37.324,-44.197)
N6: (92.693,-37.790,-42.774)
N7: (91.287,-39.899,-44.647)
N9: (89.191,-39.436,-45.312)
O5': (85.279,-42.615,-44.950)
O3': (85.583,-40.139,-47.903)
Image (generated by PyMOL):
PyMOL image
show in jmol