Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02146:02153
Extra
PDB:
ATOM 1 O3' G A2145 59.443 77.600 104.435 1.00 34.96 O
ATOM 2 P A A2146 57.946 77.754 103.879 1.00 35.88 P
ATOM 3 OP1 A A2146 57.922 78.715 102.753 1.00 35.75 O
ATOM 4 OP2 A A2146 57.102 77.990 105.064 1.00 35.86 O
ATOM 5 O5' A A2146 57.600 76.338 103.246 1.00 36.41 O
ATOM 6 C5' A A2146 56.240 75.965 102.981 1.00 40.02 C
ATOM 7 C4' A A2146 56.165 75.094 101.749 1.00 42.85 C
ATOM 8 O4' A A2146 56.435 75.892 100.570 1.00 43.86 O
ATOM 9 C3' A A2146 57.132 73.918 101.689 1.00 43.74 C
ATOM 10 O3' A A2146 56.548 72.899 100.875 1.00 45.84 O
ATOM 11 C2' A A2146 58.303 74.519 100.922 1.00 43.56 C
ATOM 12 O2' A A2146 59.092 73.519 100.314 1.00 44.25 O
ATOM 13 C1' A A2146 57.553 75.361 99.887 1.00 43.14 C
ATOM 14 N9 A A2146 58.261 76.481 99.268 1.00 41.61 N
ATOM 15 C8 A A2146 58.551 77.703 99.821 1.00 41.74 C
ATOM 16 N7 A A2146 59.119 78.536 98.989 1.00 41.43 N
ATOM 17 C5 A A2146 59.232 77.808 97.816 1.00 41.11 C
ATOM 18 C6 A A2146 59.749 78.131 96.559 1.00 41.80 C
ATOM 19 N6 A A2146 60.262 79.318 96.259 1.00 42.39 N
ATOM 20 N1 A A2146 59.722 77.180 95.606 1.00 42.72 N
ATOM 21 C2 A A2146 59.202 75.986 95.911 1.00 41.81 C
ATOM 22 N3 A A2146 58.679 75.564 97.056 1.00 40.60 N
ATOM 23 C4 A A2146 58.725 76.536 97.979 1.00 40.34 C
ATOM 24 P A A2147 55.444 71.904 101.490 1.00 46.78 P
ATOM 25 OP1 A A2147 56.139 70.980 102.430 1.00 45.57 O
ATOM 26 OP2 A A2147 54.666 71.348 100.349 1.00 45.73 O
ATOM 27 O5' A A2147 54.474 72.861 102.313 1.00 43.20 O
TER
ATOM 1 O3' U B2152 58.811 81.049 92.955 1.00 39.09 O
ATOM 2 P A B2153 60.403 80.944 92.796 1.00 37.98 P
ATOM 3 OP1 A B2153 60.677 80.726 91.356 1.00 36.94 O
ATOM 4 OP2 A B2153 60.963 80.002 93.791 1.00 37.93 O
ATOM 5 O5' A B2153 60.859 82.419 93.180 1.00 35.67 O
ATOM 6 C5' A B2153 60.394 83.552 92.424 1.00 34.49 C
ATOM 7 C4' A B2153 60.341 84.771 93.300 1.00 35.32 C
ATOM 8 O4' A B2153 59.316 84.578 94.302 1.00 36.83 O
ATOM 9 C3' A B2153 61.611 85.039 94.088 1.00 37.17 C
ATOM 10 O3' A B2153 62.567 85.757 93.305 1.00 38.87 O
ATOM 11 C2' A B2153 61.084 85.798 95.301 1.00 38.03 C
ATOM 12 O2' A B2153 60.780 87.154 95.056 1.00 41.44 O
ATOM 13 C1' A B2153 59.765 85.071 95.553 1.00 37.23 C
ATOM 14 N9 A B2153 59.898 83.934 96.466 1.00 37.59 N
ATOM 15 C8 A B2153 59.875 82.598 96.148 1.00 37.11 C
ATOM 16 N7 A B2153 60.002 81.809 97.184 1.00 38.09 N
ATOM 17 C5 A B2153 60.123 82.682 98.256 1.00 37.36 C
ATOM 18 C6 A B2153 60.280 82.469 99.630 1.00 37.37 C
ATOM 19 N6 A B2153 60.342 81.257 100.188 1.00 38.49 N
ATOM 20 N1 A B2153 60.367 83.554 100.427 1.00 37.36 N
ATOM 21 C2 A B2153 60.300 84.761 99.870 1.00 36.48 C
ATOM 22 N3 A B2153 60.154 85.089 98.596 1.00 36.82 N
ATOM 23 C4 A B2153 60.067 83.992 97.829 1.00 37.09 C
ATOM 24 P U B2154 64.139 85.409 93.427 1.00 40.33 P
ATOM 25 OP1 U B2154 64.786 85.841 92.161 1.00 36.51 O
ATOM 26 OP2 U B2154 64.314 84.010 93.895 1.00 39.78 O
ATOM 27 O5' U B2154 64.627 86.353 94.608 1.00 38.39 O
TER
ATOM 2 P A A2146 57.946 77.754 103.879 1.00 35.88 P
ATOM 3 OP1 A A2146 57.922 78.715 102.753 1.00 35.75 O
ATOM 4 OP2 A A2146 57.102 77.990 105.064 1.00 35.86 O
ATOM 5 O5' A A2146 57.600 76.338 103.246 1.00 36.41 O
ATOM 6 C5' A A2146 56.240 75.965 102.981 1.00 40.02 C
ATOM 7 C4' A A2146 56.165 75.094 101.749 1.00 42.85 C
ATOM 8 O4' A A2146 56.435 75.892 100.570 1.00 43.86 O
ATOM 9 C3' A A2146 57.132 73.918 101.689 1.00 43.74 C
ATOM 10 O3' A A2146 56.548 72.899 100.875 1.00 45.84 O
ATOM 11 C2' A A2146 58.303 74.519 100.922 1.00 43.56 C
ATOM 12 O2' A A2146 59.092 73.519 100.314 1.00 44.25 O
ATOM 13 C1' A A2146 57.553 75.361 99.887 1.00 43.14 C
ATOM 14 N9 A A2146 58.261 76.481 99.268 1.00 41.61 N
ATOM 15 C8 A A2146 58.551 77.703 99.821 1.00 41.74 C
ATOM 16 N7 A A2146 59.119 78.536 98.989 1.00 41.43 N
ATOM 17 C5 A A2146 59.232 77.808 97.816 1.00 41.11 C
ATOM 18 C6 A A2146 59.749 78.131 96.559 1.00 41.80 C
ATOM 19 N6 A A2146 60.262 79.318 96.259 1.00 42.39 N
ATOM 20 N1 A A2146 59.722 77.180 95.606 1.00 42.72 N
ATOM 21 C2 A A2146 59.202 75.986 95.911 1.00 41.81 C
ATOM 22 N3 A A2146 58.679 75.564 97.056 1.00 40.60 N
ATOM 23 C4 A A2146 58.725 76.536 97.979 1.00 40.34 C
ATOM 24 P A A2147 55.444 71.904 101.490 1.00 46.78 P
ATOM 25 OP1 A A2147 56.139 70.980 102.430 1.00 45.57 O
ATOM 26 OP2 A A2147 54.666 71.348 100.349 1.00 45.73 O
ATOM 27 O5' A A2147 54.474 72.861 102.313 1.00 43.20 O
TER
ATOM 1 O3' U B2152 58.811 81.049 92.955 1.00 39.09 O
ATOM 2 P A B2153 60.403 80.944 92.796 1.00 37.98 P
ATOM 3 OP1 A B2153 60.677 80.726 91.356 1.00 36.94 O
ATOM 4 OP2 A B2153 60.963 80.002 93.791 1.00 37.93 O
ATOM 5 O5' A B2153 60.859 82.419 93.180 1.00 35.67 O
ATOM 6 C5' A B2153 60.394 83.552 92.424 1.00 34.49 C
ATOM 7 C4' A B2153 60.341 84.771 93.300 1.00 35.32 C
ATOM 8 O4' A B2153 59.316 84.578 94.302 1.00 36.83 O
ATOM 9 C3' A B2153 61.611 85.039 94.088 1.00 37.17 C
ATOM 10 O3' A B2153 62.567 85.757 93.305 1.00 38.87 O
ATOM 11 C2' A B2153 61.084 85.798 95.301 1.00 38.03 C
ATOM 12 O2' A B2153 60.780 87.154 95.056 1.00 41.44 O
ATOM 13 C1' A B2153 59.765 85.071 95.553 1.00 37.23 C
ATOM 14 N9 A B2153 59.898 83.934 96.466 1.00 37.59 N
ATOM 15 C8 A B2153 59.875 82.598 96.148 1.00 37.11 C
ATOM 16 N7 A B2153 60.002 81.809 97.184 1.00 38.09 N
ATOM 17 C5 A B2153 60.123 82.682 98.256 1.00 37.36 C
ATOM 18 C6 A B2153 60.280 82.469 99.630 1.00 37.37 C
ATOM 19 N6 A B2153 60.342 81.257 100.188 1.00 38.49 N
ATOM 20 N1 A B2153 60.367 83.554 100.427 1.00 37.36 N
ATOM 21 C2 A B2153 60.300 84.761 99.870 1.00 36.48 C
ATOM 22 N3 A B2153 60.154 85.089 98.596 1.00 36.82 N
ATOM 23 C4 A B2153 60.067 83.992 97.829 1.00 37.09 C
ATOM 24 P U B2154 64.139 85.409 93.427 1.00 40.33 P
ATOM 25 OP1 U B2154 64.786 85.841 92.161 1.00 36.51 O
ATOM 26 OP2 U B2154 64.314 84.010 93.895 1.00 39.78 O
ATOM 27 O5' U B2154 64.627 86.353 94.608 1.00 38.39 O
TER
Atoms:
OP1: (57.922,78.715,102.753)
OP2: (57.102,77.990,105.064)
C3': (57.132,73.918,101.689)
C1': (57.553,75.361,99.887)
C5': (56.240,75.965,102.981)
O4': (56.435,75.892,100.570)
C8: (58.551,77.703,99.821)
O2': (59.092,73.519,100.314)
C6: (59.749,78.131,96.559)
C5: (59.232,77.808,97.816)
C4: (58.725,76.536,97.979)
P: (57.946,77.754,103.879)
C4': (56.165,75.094,101.749)
C2': (58.303,74.519,100.922)
C2: (59.202,75.986,95.911)
N1: (59.722,77.180,95.606)
N3: (58.679,75.564,97.056)
N6: (60.262,79.318,96.259)
N7: (59.119,78.536,98.989)
N9: (58.261,76.481,99.268)
O5': (57.600,76.338,103.246)
O3': (56.548,72.899,100.875)
OP2: (57.102,77.990,105.064)
C3': (57.132,73.918,101.689)
C1': (57.553,75.361,99.887)
C5': (56.240,75.965,102.981)
O4': (56.435,75.892,100.570)
C8: (58.551,77.703,99.821)
O2': (59.092,73.519,100.314)
C6: (59.749,78.131,96.559)
C5: (59.232,77.808,97.816)
C4: (58.725,76.536,97.979)
P: (57.946,77.754,103.879)
C4': (56.165,75.094,101.749)
C2': (58.303,74.519,100.922)
C2: (59.202,75.986,95.911)
N1: (59.722,77.180,95.606)
N3: (58.679,75.564,97.056)
N6: (60.262,79.318,96.259)
N7: (59.119,78.536,98.989)
N9: (58.261,76.481,99.268)
O5': (57.600,76.338,103.246)
O3': (56.548,72.899,100.875)
OP1: (60.677,80.726,91.356)
OP2: (60.963,80.002,93.791)
C3': (61.611,85.039,94.088)
C1': (59.765,85.071,95.553)
C5': (60.394,83.552,92.424)
O4': (59.316,84.578,94.302)
C8: (59.875,82.598,96.148)
O2': (60.780,87.154,95.056)
C6: (60.280,82.469,99.630)
C5: (60.123,82.682,98.256)
C4: (60.067,83.992,97.829)
P: (60.403,80.944,92.796)
C4': (60.341,84.771,93.300)
C2': (61.084,85.798,95.301)
C2: (60.300,84.761,99.870)
N1: (60.367,83.554,100.427)
N3: (60.154,85.089,98.596)
N6: (60.342,81.257,100.188)
N7: (60.002,81.809,97.184)
N9: (59.898,83.934,96.466)
O5': (60.859,82.419,93.180)
O3': (62.567,85.757,93.305)
OP2: (60.963,80.002,93.791)
C3': (61.611,85.039,94.088)
C1': (59.765,85.071,95.553)
C5': (60.394,83.552,92.424)
O4': (59.316,84.578,94.302)
C8: (59.875,82.598,96.148)
O2': (60.780,87.154,95.056)
C6: (60.280,82.469,99.630)
C5: (60.123,82.682,98.256)
C4: (60.067,83.992,97.829)
P: (60.403,80.944,92.796)
C4': (60.341,84.771,93.300)
C2': (61.084,85.798,95.301)
C2: (60.300,84.761,99.870)
N1: (60.367,83.554,100.427)
N3: (60.154,85.089,98.596)
N6: (60.342,81.257,100.188)
N7: (60.002,81.809,97.184)
N9: (59.898,83.934,96.466)
O5': (60.859,82.419,93.180)
O3': (62.567,85.757,93.305)
Image (generated by PyMOL):