Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0676:0686
Extra
PDB:
ATOM 1 O3' C A 675 43.099 73.043 40.208 1.00 47.91 O
ATOM 2 P A A 676 44.304 71.990 40.313 1.00 49.97 P
ATOM 3 OP1 A A 676 45.185 72.190 39.129 1.00 48.42 O
ATOM 4 OP2 A A 676 43.761 70.635 40.605 1.00 51.53 O
ATOM 5 O5' A A 676 45.080 72.464 41.612 1.00 47.83 O
ATOM 6 C5' A A 676 46.304 73.161 41.497 1.00 46.66 C
ATOM 7 C4' A A 676 47.362 72.468 42.300 1.00 45.72 C
ATOM 8 O4' A A 676 47.207 71.024 42.193 1.00 44.19 O
ATOM 9 C3' A A 676 48.767 72.783 41.813 1.00 46.03 C
ATOM 10 O3' A A 676 49.653 72.644 42.905 1.00 45.04 O
ATOM 11 C2' A A 676 49.022 71.619 40.873 1.00 47.80 C
ATOM 12 O2' A A 676 50.392 71.392 40.616 1.00 51.96 O
ATOM 13 C1' A A 676 48.401 70.484 41.686 1.00 47.01 C
ATOM 14 N9 A A 676 48.111 69.279 40.918 1.00 47.32 N
ATOM 15 C8 A A 676 47.102 69.040 40.020 1.00 48.13 C
ATOM 16 N7 A A 676 47.184 67.868 39.438 1.00 48.47 N
ATOM 17 C5 A A 676 48.315 67.291 40.004 1.00 47.04 C
ATOM 18 C6 A A 676 48.956 66.058 39.794 1.00 46.39 C
ATOM 19 N6 A A 676 48.549 65.153 38.898 1.00 47.34 N
ATOM 20 N1 A A 676 50.051 65.788 40.538 1.00 44.81 N
ATOM 21 C2 A A 676 50.472 66.705 41.416 1.00 43.71 C
ATOM 22 N3 A A 676 49.968 67.901 41.687 1.00 43.90 N
ATOM 23 C4 A A 676 48.878 68.138 40.937 1.00 46.43 C
ATOM 24 P G A 677 50.228 73.936 43.649 1.00 43.07 P
ATOM 25 OP1 G A 677 49.091 74.800 44.042 1.00 41.60 O
ATOM 26 OP2 G A 677 51.318 74.490 42.803 1.00 44.37 O
ATOM 27 O5' G A 677 50.841 73.296 44.970 1.00 42.13 O
TER
ATOM 1 O3' G B 685 51.440 61.401 38.983 1.00 49.25 O
ATOM 2 P A B 686 49.985 61.522 38.291 1.00 51.02 P
ATOM 3 OP1 A B 686 49.458 60.142 38.176 1.00 53.52 O
ATOM 4 OP2 A B 686 50.063 62.368 37.077 1.00 51.86 O
ATOM 5 O5' A B 686 49.116 62.301 39.377 1.00 50.52 O
ATOM 6 C5' A B 686 47.817 61.827 39.804 1.00 49.78 C
ATOM 7 C4' A B 686 47.714 61.903 41.313 1.00 50.91 C
ATOM 8 O4' A B 686 48.168 63.202 41.756 1.00 50.09 O
ATOM 9 C3' A B 686 46.319 61.825 41.920 1.00 51.06 C
ATOM 10 O3' A B 686 45.893 60.464 42.040 1.00 52.69 O
ATOM 11 C2' A B 686 46.533 62.435 43.310 1.00 50.97 C
ATOM 12 O2' A B 686 46.945 61.484 44.269 1.00 50.17 O
ATOM 13 C1' A B 686 47.689 63.419 43.065 1.00 50.15 C
ATOM 14 N9 A B 686 47.401 64.845 43.256 1.00 48.97 N
ATOM 15 C8 A B 686 46.458 65.628 42.632 1.00 48.38 C
ATOM 16 N7 A B 686 46.422 66.864 43.070 1.00 48.03 N
ATOM 17 C5 A B 686 47.416 66.905 44.042 1.00 47.73 C
ATOM 18 C6 A B 686 47.878 67.937 44.895 1.00 45.71 C
ATOM 19 N6 A B 686 47.364 69.171 44.919 1.00 44.15 N
ATOM 20 N1 A B 686 48.894 67.648 45.736 1.00 43.77 N
ATOM 21 C2 A B 686 49.403 66.412 45.724 1.00 45.12 C
ATOM 22 N3 A B 686 49.053 65.360 44.984 1.00 47.32 N
ATOM 23 C4 A B 686 48.040 65.674 44.154 1.00 48.08 C
ATOM 24 P C B 687 44.379 60.054 41.684 1.00 53.69 P
ATOM 25 OP1 C B 687 44.324 58.570 41.646 1.00 54.66 O
ATOM 26 OP2 C B 687 43.958 60.832 40.487 1.00 55.36 O
ATOM 27 O5' C B 687 43.516 60.546 42.929 1.00 52.52 O
TER
ATOM 2 P A A 676 44.304 71.990 40.313 1.00 49.97 P
ATOM 3 OP1 A A 676 45.185 72.190 39.129 1.00 48.42 O
ATOM 4 OP2 A A 676 43.761 70.635 40.605 1.00 51.53 O
ATOM 5 O5' A A 676 45.080 72.464 41.612 1.00 47.83 O
ATOM 6 C5' A A 676 46.304 73.161 41.497 1.00 46.66 C
ATOM 7 C4' A A 676 47.362 72.468 42.300 1.00 45.72 C
ATOM 8 O4' A A 676 47.207 71.024 42.193 1.00 44.19 O
ATOM 9 C3' A A 676 48.767 72.783 41.813 1.00 46.03 C
ATOM 10 O3' A A 676 49.653 72.644 42.905 1.00 45.04 O
ATOM 11 C2' A A 676 49.022 71.619 40.873 1.00 47.80 C
ATOM 12 O2' A A 676 50.392 71.392 40.616 1.00 51.96 O
ATOM 13 C1' A A 676 48.401 70.484 41.686 1.00 47.01 C
ATOM 14 N9 A A 676 48.111 69.279 40.918 1.00 47.32 N
ATOM 15 C8 A A 676 47.102 69.040 40.020 1.00 48.13 C
ATOM 16 N7 A A 676 47.184 67.868 39.438 1.00 48.47 N
ATOM 17 C5 A A 676 48.315 67.291 40.004 1.00 47.04 C
ATOM 18 C6 A A 676 48.956 66.058 39.794 1.00 46.39 C
ATOM 19 N6 A A 676 48.549 65.153 38.898 1.00 47.34 N
ATOM 20 N1 A A 676 50.051 65.788 40.538 1.00 44.81 N
ATOM 21 C2 A A 676 50.472 66.705 41.416 1.00 43.71 C
ATOM 22 N3 A A 676 49.968 67.901 41.687 1.00 43.90 N
ATOM 23 C4 A A 676 48.878 68.138 40.937 1.00 46.43 C
ATOM 24 P G A 677 50.228 73.936 43.649 1.00 43.07 P
ATOM 25 OP1 G A 677 49.091 74.800 44.042 1.00 41.60 O
ATOM 26 OP2 G A 677 51.318 74.490 42.803 1.00 44.37 O
ATOM 27 O5' G A 677 50.841 73.296 44.970 1.00 42.13 O
TER
ATOM 1 O3' G B 685 51.440 61.401 38.983 1.00 49.25 O
ATOM 2 P A B 686 49.985 61.522 38.291 1.00 51.02 P
ATOM 3 OP1 A B 686 49.458 60.142 38.176 1.00 53.52 O
ATOM 4 OP2 A B 686 50.063 62.368 37.077 1.00 51.86 O
ATOM 5 O5' A B 686 49.116 62.301 39.377 1.00 50.52 O
ATOM 6 C5' A B 686 47.817 61.827 39.804 1.00 49.78 C
ATOM 7 C4' A B 686 47.714 61.903 41.313 1.00 50.91 C
ATOM 8 O4' A B 686 48.168 63.202 41.756 1.00 50.09 O
ATOM 9 C3' A B 686 46.319 61.825 41.920 1.00 51.06 C
ATOM 10 O3' A B 686 45.893 60.464 42.040 1.00 52.69 O
ATOM 11 C2' A B 686 46.533 62.435 43.310 1.00 50.97 C
ATOM 12 O2' A B 686 46.945 61.484 44.269 1.00 50.17 O
ATOM 13 C1' A B 686 47.689 63.419 43.065 1.00 50.15 C
ATOM 14 N9 A B 686 47.401 64.845 43.256 1.00 48.97 N
ATOM 15 C8 A B 686 46.458 65.628 42.632 1.00 48.38 C
ATOM 16 N7 A B 686 46.422 66.864 43.070 1.00 48.03 N
ATOM 17 C5 A B 686 47.416 66.905 44.042 1.00 47.73 C
ATOM 18 C6 A B 686 47.878 67.937 44.895 1.00 45.71 C
ATOM 19 N6 A B 686 47.364 69.171 44.919 1.00 44.15 N
ATOM 20 N1 A B 686 48.894 67.648 45.736 1.00 43.77 N
ATOM 21 C2 A B 686 49.403 66.412 45.724 1.00 45.12 C
ATOM 22 N3 A B 686 49.053 65.360 44.984 1.00 47.32 N
ATOM 23 C4 A B 686 48.040 65.674 44.154 1.00 48.08 C
ATOM 24 P C B 687 44.379 60.054 41.684 1.00 53.69 P
ATOM 25 OP1 C B 687 44.324 58.570 41.646 1.00 54.66 O
ATOM 26 OP2 C B 687 43.958 60.832 40.487 1.00 55.36 O
ATOM 27 O5' C B 687 43.516 60.546 42.929 1.00 52.52 O
TER
Atoms:
OP1: (45.185,72.190,39.129)
OP2: (43.761,70.635,40.605)
C3': (48.767,72.783,41.813)
C1': (48.401,70.484,41.686)
C5': (46.304,73.161,41.497)
O4': (47.207,71.024,42.193)
C8: (47.102,69.040,40.020)
O2': (50.392,71.392,40.616)
C6: (48.956,66.058,39.794)
C5: (48.315,67.291,40.004)
C4: (48.878,68.138,40.937)
P: (44.304,71.990,40.313)
C4': (47.362,72.468,42.300)
C2': (49.022,71.619,40.873)
C2: (50.472,66.705,41.416)
N1: (50.051,65.788,40.538)
N3: (49.968,67.901,41.687)
N6: (48.549,65.153,38.898)
N7: (47.184,67.868,39.438)
N9: (48.111,69.279,40.918)
O5': (45.080,72.464,41.612)
O3': (49.653,72.644,42.905)
OP2: (43.761,70.635,40.605)
C3': (48.767,72.783,41.813)
C1': (48.401,70.484,41.686)
C5': (46.304,73.161,41.497)
O4': (47.207,71.024,42.193)
C8: (47.102,69.040,40.020)
O2': (50.392,71.392,40.616)
C6: (48.956,66.058,39.794)
C5: (48.315,67.291,40.004)
C4: (48.878,68.138,40.937)
P: (44.304,71.990,40.313)
C4': (47.362,72.468,42.300)
C2': (49.022,71.619,40.873)
C2: (50.472,66.705,41.416)
N1: (50.051,65.788,40.538)
N3: (49.968,67.901,41.687)
N6: (48.549,65.153,38.898)
N7: (47.184,67.868,39.438)
N9: (48.111,69.279,40.918)
O5': (45.080,72.464,41.612)
O3': (49.653,72.644,42.905)
OP1: (49.458,60.142,38.176)
OP2: (50.063,62.368,37.077)
C3': (46.319,61.825,41.920)
C1': (47.689,63.419,43.065)
C5': (47.817,61.827,39.804)
O4': (48.168,63.202,41.756)
C8: (46.458,65.628,42.632)
O2': (46.945,61.484,44.269)
C6: (47.878,67.937,44.895)
C5: (47.416,66.905,44.042)
C4: (48.040,65.674,44.154)
P: (49.985,61.522,38.291)
C4': (47.714,61.903,41.313)
C2': (46.533,62.435,43.310)
C2: (49.403,66.412,45.724)
N1: (48.894,67.648,45.736)
N3: (49.053,65.360,44.984)
N6: (47.364,69.171,44.919)
N7: (46.422,66.864,43.070)
N9: (47.401,64.845,43.256)
O5': (49.116,62.301,39.377)
O3': (45.893,60.464,42.040)
OP2: (50.063,62.368,37.077)
C3': (46.319,61.825,41.920)
C1': (47.689,63.419,43.065)
C5': (47.817,61.827,39.804)
O4': (48.168,63.202,41.756)
C8: (46.458,65.628,42.632)
O2': (46.945,61.484,44.269)
C6: (47.878,67.937,44.895)
C5: (47.416,66.905,44.042)
C4: (48.040,65.674,44.154)
P: (49.985,61.522,38.291)
C4': (47.714,61.903,41.313)
C2': (46.533,62.435,43.310)
C2: (49.403,66.412,45.724)
N1: (48.894,67.648,45.736)
N3: (49.053,65.360,44.984)
N6: (47.364,69.171,44.919)
N7: (46.422,66.864,43.070)
N9: (47.401,64.845,43.256)
O5': (49.116,62.301,39.377)
O3': (45.893,60.464,42.040)
Image (generated by PyMOL):