Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A827:A2489
Extra
PDB:
ATOM 1 O3' C A 826 63.297 143.779 91.371 1.00 32.74 O
ATOM 2 P U A 827 61.757 144.104 91.624 1.00 32.74 P
ATOM 3 OP1 U A 827 61.675 144.849 92.903 1.00 34.00 O
ATOM 4 OP2 U A 827 61.065 142.824 91.489 1.00 33.27 O
ATOM 5 O5' U A 827 61.351 145.053 90.404 1.00 33.90 O
ATOM 6 C5' U A 827 61.626 144.660 89.025 1.00 31.97 C
ATOM 7 C4' U A 827 60.431 144.903 88.124 1.00 32.25 C
ATOM 8 O4' U A 827 59.385 143.965 88.445 1.00 32.78 O
ATOM 9 C3' U A 827 59.784 146.274 88.223 1.00 32.42 C
ATOM 10 O3' U A 827 60.398 147.160 87.304 1.00 30.71 O
ATOM 11 C2' U A 827 58.345 146.023 87.796 1.00 32.51 C
ATOM 12 O2' U A 827 58.181 146.137 86.398 1.00 35.03 O
ATOM 13 C1' U A 827 58.127 144.572 88.236 1.00 33.26 C
ATOM 14 N1 U A 827 57.279 144.317 89.411 1.00 34.89 N
ATOM 15 C2 U A 827 55.923 144.577 89.309 1.00 36.06 C
ATOM 16 O2 U A 827 55.418 145.126 88.346 1.00 37.18 O
ATOM 17 N3 U A 827 55.167 144.190 90.389 1.00 37.20 N
ATOM 18 C4 U A 827 55.608 143.615 91.552 1.00 37.44 C
ATOM 19 O4 U A 827 54.786 143.159 92.349 1.00 37.20 O
ATOM 20 C5 U A 827 57.030 143.449 91.620 1.00 38.19 C
ATOM 21 C6 U A 827 57.798 143.793 90.571 1.00 35.34 C
ATOM 22 P A A 828 60.049 148.723 87.340 1.00 30.87 P
ATOM 23 OP1 A A 828 58.993 148.907 88.356 1.00 29.19 O
ATOM 24 OP2 A A 828 59.845 149.232 85.969 1.00 31.49 O
ATOM 25 O5' A A 828 61.393 149.379 87.870 1.00 28.71 O
TER
ATOM 1 O3' C B2488 58.832 143.240 95.752 1.00 37.29 O
ATOM 2 P U B2489 58.735 144.134 97.059 1.00 35.79 P
ATOM 3 OP1 U B2489 59.569 145.296 96.739 1.00 35.39 O
ATOM 4 OP2 U B2489 59.044 143.295 98.244 1.00 35.57 O
ATOM 5 O5' U B2489 57.236 144.649 97.121 1.00 34.85 O
ATOM 6 C5' U B2489 56.931 145.788 97.928 1.00 34.78 C
ATOM 7 C4' U B2489 55.587 146.360 97.574 1.00 34.93 C
ATOM 8 O4' U B2489 55.634 147.038 96.297 1.00 34.56 O
ATOM 9 C3' U B2489 54.442 145.377 97.492 1.00 34.25 C
ATOM 10 O3' U B2489 53.322 146.041 98.014 1.00 33.68 O
ATOM 11 C2' U B2489 54.309 145.150 95.996 1.00 34.64 C
ATOM 12 O2' U B2489 53.022 144.696 95.627 1.00 33.80 O
ATOM 13 C1' U B2489 54.599 146.553 95.478 1.00 34.44 C
ATOM 14 N1 U B2489 55.044 146.650 94.085 1.00 34.90 N
ATOM 15 C2 U B2489 54.103 146.999 93.142 1.00 35.01 C
ATOM 16 O2 U B2489 52.934 147.174 93.411 1.00 35.37 O
ATOM 17 N3 U B2489 54.588 147.140 91.875 1.00 34.46 N
ATOM 18 C4 U B2489 55.894 146.972 91.465 1.00 35.17 C
ATOM 19 O4 U B2489 56.206 147.277 90.314 1.00 36.60 O
ATOM 20 C5 U B2489 56.798 146.578 92.494 1.00 34.91 C
ATOM 21 C6 U B2489 56.354 146.430 93.736 1.00 34.38 C
ATOM 22 P A B2490 52.514 145.366 99.200 1.00 34.44 P
ATOM 23 OP1 A B2490 51.662 146.381 99.858 1.00 37.45 O
ATOM 24 OP2 A B2490 53.489 144.615 99.996 1.00 35.90 O
ATOM 25 O5' A B2490 51.557 144.386 98.399 1.00 36.38 O
TER
ATOM 2 P U A 827 61.757 144.104 91.624 1.00 32.74 P
ATOM 3 OP1 U A 827 61.675 144.849 92.903 1.00 34.00 O
ATOM 4 OP2 U A 827 61.065 142.824 91.489 1.00 33.27 O
ATOM 5 O5' U A 827 61.351 145.053 90.404 1.00 33.90 O
ATOM 6 C5' U A 827 61.626 144.660 89.025 1.00 31.97 C
ATOM 7 C4' U A 827 60.431 144.903 88.124 1.00 32.25 C
ATOM 8 O4' U A 827 59.385 143.965 88.445 1.00 32.78 O
ATOM 9 C3' U A 827 59.784 146.274 88.223 1.00 32.42 C
ATOM 10 O3' U A 827 60.398 147.160 87.304 1.00 30.71 O
ATOM 11 C2' U A 827 58.345 146.023 87.796 1.00 32.51 C
ATOM 12 O2' U A 827 58.181 146.137 86.398 1.00 35.03 O
ATOM 13 C1' U A 827 58.127 144.572 88.236 1.00 33.26 C
ATOM 14 N1 U A 827 57.279 144.317 89.411 1.00 34.89 N
ATOM 15 C2 U A 827 55.923 144.577 89.309 1.00 36.06 C
ATOM 16 O2 U A 827 55.418 145.126 88.346 1.00 37.18 O
ATOM 17 N3 U A 827 55.167 144.190 90.389 1.00 37.20 N
ATOM 18 C4 U A 827 55.608 143.615 91.552 1.00 37.44 C
ATOM 19 O4 U A 827 54.786 143.159 92.349 1.00 37.20 O
ATOM 20 C5 U A 827 57.030 143.449 91.620 1.00 38.19 C
ATOM 21 C6 U A 827 57.798 143.793 90.571 1.00 35.34 C
ATOM 22 P A A 828 60.049 148.723 87.340 1.00 30.87 P
ATOM 23 OP1 A A 828 58.993 148.907 88.356 1.00 29.19 O
ATOM 24 OP2 A A 828 59.845 149.232 85.969 1.00 31.49 O
ATOM 25 O5' A A 828 61.393 149.379 87.870 1.00 28.71 O
TER
ATOM 1 O3' C B2488 58.832 143.240 95.752 1.00 37.29 O
ATOM 2 P U B2489 58.735 144.134 97.059 1.00 35.79 P
ATOM 3 OP1 U B2489 59.569 145.296 96.739 1.00 35.39 O
ATOM 4 OP2 U B2489 59.044 143.295 98.244 1.00 35.57 O
ATOM 5 O5' U B2489 57.236 144.649 97.121 1.00 34.85 O
ATOM 6 C5' U B2489 56.931 145.788 97.928 1.00 34.78 C
ATOM 7 C4' U B2489 55.587 146.360 97.574 1.00 34.93 C
ATOM 8 O4' U B2489 55.634 147.038 96.297 1.00 34.56 O
ATOM 9 C3' U B2489 54.442 145.377 97.492 1.00 34.25 C
ATOM 10 O3' U B2489 53.322 146.041 98.014 1.00 33.68 O
ATOM 11 C2' U B2489 54.309 145.150 95.996 1.00 34.64 C
ATOM 12 O2' U B2489 53.022 144.696 95.627 1.00 33.80 O
ATOM 13 C1' U B2489 54.599 146.553 95.478 1.00 34.44 C
ATOM 14 N1 U B2489 55.044 146.650 94.085 1.00 34.90 N
ATOM 15 C2 U B2489 54.103 146.999 93.142 1.00 35.01 C
ATOM 16 O2 U B2489 52.934 147.174 93.411 1.00 35.37 O
ATOM 17 N3 U B2489 54.588 147.140 91.875 1.00 34.46 N
ATOM 18 C4 U B2489 55.894 146.972 91.465 1.00 35.17 C
ATOM 19 O4 U B2489 56.206 147.277 90.314 1.00 36.60 O
ATOM 20 C5 U B2489 56.798 146.578 92.494 1.00 34.91 C
ATOM 21 C6 U B2489 56.354 146.430 93.736 1.00 34.38 C
ATOM 22 P A B2490 52.514 145.366 99.200 1.00 34.44 P
ATOM 23 OP1 A B2490 51.662 146.381 99.858 1.00 37.45 O
ATOM 24 OP2 A B2490 53.489 144.615 99.996 1.00 35.90 O
ATOM 25 O5' A B2490 51.557 144.386 98.399 1.00 36.38 O
TER
Atoms:
C4: (55.608,143.615,91.552)
N3: (55.167,144.190,90.389)
OP1: (61.675,144.849,92.903)
OP2: (61.065,142.824,91.489)
C2: (55.923,144.577,89.309)
C1': (58.127,144.572,88.236)
C3': (59.784,146.274,88.223)
O5': (61.351,145.053,90.404)
O4': (59.385,143.965,88.445)
C5': (61.626,144.660,89.025)
P: (61.757,144.104,91.624)
C4': (60.431,144.903,88.124)
C2': (58.345,146.023,87.796)
O2': (58.181,146.137,86.398)
N1: (57.279,144.317,89.411)
O4: (54.786,143.159,92.349)
O2: (55.418,145.126,88.346)
C6: (57.798,143.793,90.571)
C5: (57.030,143.449,91.620)
O3': (60.398,147.160,87.304)
N3: (55.167,144.190,90.389)
OP1: (61.675,144.849,92.903)
OP2: (61.065,142.824,91.489)
C2: (55.923,144.577,89.309)
C1': (58.127,144.572,88.236)
C3': (59.784,146.274,88.223)
O5': (61.351,145.053,90.404)
O4': (59.385,143.965,88.445)
C5': (61.626,144.660,89.025)
P: (61.757,144.104,91.624)
C4': (60.431,144.903,88.124)
C2': (58.345,146.023,87.796)
O2': (58.181,146.137,86.398)
N1: (57.279,144.317,89.411)
O4: (54.786,143.159,92.349)
O2: (55.418,145.126,88.346)
C6: (57.798,143.793,90.571)
C5: (57.030,143.449,91.620)
O3': (60.398,147.160,87.304)
C4: (55.894,146.972,91.465)
N3: (54.588,147.140,91.875)
OP1: (59.569,145.296,96.739)
OP2: (59.044,143.295,98.244)
C2: (54.103,146.999,93.142)
C1': (54.599,146.553,95.478)
C3': (54.442,145.377,97.492)
O5': (57.236,144.649,97.121)
O4': (55.634,147.038,96.297)
C5': (56.931,145.788,97.928)
P: (58.735,144.134,97.059)
C4': (55.587,146.360,97.574)
C2': (54.309,145.150,95.996)
O2': (53.022,144.696,95.627)
N1: (55.044,146.650,94.085)
O4: (56.206,147.277,90.314)
O2: (52.934,147.174,93.411)
C6: (56.354,146.430,93.736)
C5: (56.798,146.578,92.494)
O3': (53.322,146.041,98.014)
N3: (54.588,147.140,91.875)
OP1: (59.569,145.296,96.739)
OP2: (59.044,143.295,98.244)
C2: (54.103,146.999,93.142)
C1': (54.599,146.553,95.478)
C3': (54.442,145.377,97.492)
O5': (57.236,144.649,97.121)
O4': (55.634,147.038,96.297)
C5': (56.931,145.788,97.928)
P: (58.735,144.134,97.059)
C4': (55.587,146.360,97.574)
C2': (54.309,145.150,95.996)
O2': (53.022,144.696,95.627)
N1: (55.044,146.650,94.085)
O4: (56.206,147.277,90.314)
O2: (52.934,147.174,93.411)
C6: (56.354,146.430,93.736)
C5: (56.798,146.578,92.494)
O3': (53.322,146.041,98.014)
Image (generated by PyMOL):