Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0827:02489
Extra
PDB:
ATOM 1 O3' C A 826 63.158 143.674 91.012 1.00 28.92 O
ATOM 2 P U A 827 61.613 144.050 91.210 1.00 28.16 P
ATOM 3 OP1 U A 827 61.439 144.754 92.497 1.00 27.13 O
ATOM 4 OP2 U A 827 60.835 142.821 90.931 1.00 31.92 O
ATOM 5 O5' U A 827 61.315 145.088 90.043 1.00 27.12 O
ATOM 6 C5' U A 827 61.633 144.781 88.676 1.00 23.11 C
ATOM 7 C4' U A 827 60.403 144.933 87.817 1.00 26.94 C
ATOM 8 O4' U A 827 59.409 143.962 88.230 1.00 28.74 O
ATOM 9 C3' U A 827 59.677 146.262 87.940 1.00 25.36 C
ATOM 10 O3' U A 827 60.310 147.211 87.085 1.00 22.96 O
ATOM 11 C2' U A 827 58.264 145.913 87.473 1.00 25.73 C
ATOM 12 O2' U A 827 58.138 145.898 86.073 1.00 28.79 O
ATOM 13 C1' U A 827 58.120 144.463 87.942 1.00 27.09 C
ATOM 14 N1 U A 827 57.231 144.203 89.085 1.00 28.98 N
ATOM 15 C2 U A 827 55.879 144.497 88.943 1.00 29.21 C
ATOM 16 O2 U A 827 55.407 144.992 87.937 1.00 29.93 O
ATOM 17 N3 U A 827 55.104 144.200 90.033 1.00 30.18 N
ATOM 18 C4 U A 827 55.525 143.668 91.230 1.00 31.90 C
ATOM 19 O4 U A 827 54.714 143.518 92.144 1.00 34.00 O
ATOM 20 C5 U A 827 56.928 143.400 91.302 1.00 32.00 C
ATOM 21 C6 U A 827 57.712 143.670 90.255 1.00 28.83 C
ATOM 22 P A A 828 59.922 148.762 87.172 1.00 26.14 P
ATOM 23 OP1 A A 828 58.903 148.954 88.234 1.00 27.03 O
ATOM 24 OP2 A A 828 59.652 149.248 85.800 1.00 26.40 O
ATOM 25 O5' A A 828 61.266 149.458 87.661 1.00 26.18 O
TER
ATOM 1 O3' C B2488 58.655 143.299 95.418 1.00 30.05 O
ATOM 2 P U B2489 58.709 144.236 96.714 1.00 31.08 P
ATOM 3 OP1 U B2489 59.599 145.376 96.376 1.00 31.27 O
ATOM 4 OP2 U B2489 59.006 143.393 97.908 1.00 32.05 O
ATOM 5 O5' U B2489 57.230 144.791 96.843 1.00 28.19 O
ATOM 6 C5' U B2489 56.952 145.924 97.658 1.00 27.48 C
ATOM 7 C4' U B2489 55.583 146.473 97.339 1.00 31.02 C
ATOM 8 O4' U B2489 55.602 147.169 96.060 1.00 32.47 O
ATOM 9 C3' U B2489 54.454 145.453 97.250 1.00 29.10 C
ATOM 10 O3' U B2489 53.286 146.073 97.752 1.00 31.48 O
ATOM 11 C2' U B2489 54.336 145.236 95.745 1.00 29.98 C
ATOM 12 O2' U B2489 53.072 144.773 95.338 1.00 28.02 O
ATOM 13 C1' U B2489 54.582 146.653 95.234 1.00 31.10 C
ATOM 14 N1 U B2489 55.010 146.765 93.833 1.00 32.97 N
ATOM 15 C2 U B2489 54.042 147.058 92.891 1.00 34.07 C
ATOM 16 O2 U B2489 52.872 147.208 93.169 1.00 35.77 O
ATOM 17 N3 U B2489 54.499 147.173 91.606 1.00 35.22 N
ATOM 18 C4 U B2489 55.798 147.037 91.170 1.00 34.63 C
ATOM 19 O4 U B2489 56.058 147.230 89.981 1.00 36.66 O
ATOM 20 C5 U B2489 56.740 146.723 92.197 1.00 34.30 C
ATOM 21 C6 U B2489 56.324 146.598 93.463 1.00 33.96 C
ATOM 22 P A B2490 52.399 145.330 98.858 1.00 31.50 P
ATOM 23 OP1 A B2490 51.428 146.307 99.385 1.00 32.31 O
ATOM 24 OP2 A B2490 53.310 144.641 99.790 1.00 35.66 O
ATOM 25 O5' A B2490 51.558 144.289 98.000 1.00 34.80 O
TER
ATOM 2 P U A 827 61.613 144.050 91.210 1.00 28.16 P
ATOM 3 OP1 U A 827 61.439 144.754 92.497 1.00 27.13 O
ATOM 4 OP2 U A 827 60.835 142.821 90.931 1.00 31.92 O
ATOM 5 O5' U A 827 61.315 145.088 90.043 1.00 27.12 O
ATOM 6 C5' U A 827 61.633 144.781 88.676 1.00 23.11 C
ATOM 7 C4' U A 827 60.403 144.933 87.817 1.00 26.94 C
ATOM 8 O4' U A 827 59.409 143.962 88.230 1.00 28.74 O
ATOM 9 C3' U A 827 59.677 146.262 87.940 1.00 25.36 C
ATOM 10 O3' U A 827 60.310 147.211 87.085 1.00 22.96 O
ATOM 11 C2' U A 827 58.264 145.913 87.473 1.00 25.73 C
ATOM 12 O2' U A 827 58.138 145.898 86.073 1.00 28.79 O
ATOM 13 C1' U A 827 58.120 144.463 87.942 1.00 27.09 C
ATOM 14 N1 U A 827 57.231 144.203 89.085 1.00 28.98 N
ATOM 15 C2 U A 827 55.879 144.497 88.943 1.00 29.21 C
ATOM 16 O2 U A 827 55.407 144.992 87.937 1.00 29.93 O
ATOM 17 N3 U A 827 55.104 144.200 90.033 1.00 30.18 N
ATOM 18 C4 U A 827 55.525 143.668 91.230 1.00 31.90 C
ATOM 19 O4 U A 827 54.714 143.518 92.144 1.00 34.00 O
ATOM 20 C5 U A 827 56.928 143.400 91.302 1.00 32.00 C
ATOM 21 C6 U A 827 57.712 143.670 90.255 1.00 28.83 C
ATOM 22 P A A 828 59.922 148.762 87.172 1.00 26.14 P
ATOM 23 OP1 A A 828 58.903 148.954 88.234 1.00 27.03 O
ATOM 24 OP2 A A 828 59.652 149.248 85.800 1.00 26.40 O
ATOM 25 O5' A A 828 61.266 149.458 87.661 1.00 26.18 O
TER
ATOM 1 O3' C B2488 58.655 143.299 95.418 1.00 30.05 O
ATOM 2 P U B2489 58.709 144.236 96.714 1.00 31.08 P
ATOM 3 OP1 U B2489 59.599 145.376 96.376 1.00 31.27 O
ATOM 4 OP2 U B2489 59.006 143.393 97.908 1.00 32.05 O
ATOM 5 O5' U B2489 57.230 144.791 96.843 1.00 28.19 O
ATOM 6 C5' U B2489 56.952 145.924 97.658 1.00 27.48 C
ATOM 7 C4' U B2489 55.583 146.473 97.339 1.00 31.02 C
ATOM 8 O4' U B2489 55.602 147.169 96.060 1.00 32.47 O
ATOM 9 C3' U B2489 54.454 145.453 97.250 1.00 29.10 C
ATOM 10 O3' U B2489 53.286 146.073 97.752 1.00 31.48 O
ATOM 11 C2' U B2489 54.336 145.236 95.745 1.00 29.98 C
ATOM 12 O2' U B2489 53.072 144.773 95.338 1.00 28.02 O
ATOM 13 C1' U B2489 54.582 146.653 95.234 1.00 31.10 C
ATOM 14 N1 U B2489 55.010 146.765 93.833 1.00 32.97 N
ATOM 15 C2 U B2489 54.042 147.058 92.891 1.00 34.07 C
ATOM 16 O2 U B2489 52.872 147.208 93.169 1.00 35.77 O
ATOM 17 N3 U B2489 54.499 147.173 91.606 1.00 35.22 N
ATOM 18 C4 U B2489 55.798 147.037 91.170 1.00 34.63 C
ATOM 19 O4 U B2489 56.058 147.230 89.981 1.00 36.66 O
ATOM 20 C5 U B2489 56.740 146.723 92.197 1.00 34.30 C
ATOM 21 C6 U B2489 56.324 146.598 93.463 1.00 33.96 C
ATOM 22 P A B2490 52.399 145.330 98.858 1.00 31.50 P
ATOM 23 OP1 A B2490 51.428 146.307 99.385 1.00 32.31 O
ATOM 24 OP2 A B2490 53.310 144.641 99.790 1.00 35.66 O
ATOM 25 O5' A B2490 51.558 144.289 98.000 1.00 34.80 O
TER
Atoms:
C4: (55.525,143.668,91.230)
N3: (55.104,144.200,90.033)
OP1: (61.439,144.754,92.497)
OP2: (60.835,142.821,90.931)
C2: (55.879,144.497,88.943)
C1': (58.120,144.463,87.942)
C3': (59.677,146.262,87.940)
O5': (61.315,145.088,90.043)
O4': (59.409,143.962,88.230)
C5': (61.633,144.781,88.676)
P: (61.613,144.050,91.210)
C4': (60.403,144.933,87.817)
C2': (58.264,145.913,87.473)
O2': (58.138,145.898,86.073)
N1: (57.231,144.203,89.085)
O4: (54.714,143.518,92.144)
O2: (55.407,144.992,87.937)
C6: (57.712,143.670,90.255)
C5: (56.928,143.400,91.302)
O3': (60.310,147.211,87.085)
N3: (55.104,144.200,90.033)
OP1: (61.439,144.754,92.497)
OP2: (60.835,142.821,90.931)
C2: (55.879,144.497,88.943)
C1': (58.120,144.463,87.942)
C3': (59.677,146.262,87.940)
O5': (61.315,145.088,90.043)
O4': (59.409,143.962,88.230)
C5': (61.633,144.781,88.676)
P: (61.613,144.050,91.210)
C4': (60.403,144.933,87.817)
C2': (58.264,145.913,87.473)
O2': (58.138,145.898,86.073)
N1: (57.231,144.203,89.085)
O4: (54.714,143.518,92.144)
O2: (55.407,144.992,87.937)
C6: (57.712,143.670,90.255)
C5: (56.928,143.400,91.302)
O3': (60.310,147.211,87.085)
C4: (55.798,147.037,91.170)
N3: (54.499,147.173,91.606)
OP1: (59.599,145.376,96.376)
OP2: (59.006,143.393,97.908)
C2: (54.042,147.058,92.891)
C1': (54.582,146.653,95.234)
C3': (54.454,145.453,97.250)
O5': (57.230,144.791,96.843)
O4': (55.602,147.169,96.060)
C5': (56.952,145.924,97.658)
P: (58.709,144.236,96.714)
C4': (55.583,146.473,97.339)
C2': (54.336,145.236,95.745)
O2': (53.072,144.773,95.338)
N1: (55.010,146.765,93.833)
O4: (56.058,147.230,89.981)
O2: (52.872,147.208,93.169)
C6: (56.324,146.598,93.463)
C5: (56.740,146.723,92.197)
O3': (53.286,146.073,97.752)
N3: (54.499,147.173,91.606)
OP1: (59.599,145.376,96.376)
OP2: (59.006,143.393,97.908)
C2: (54.042,147.058,92.891)
C1': (54.582,146.653,95.234)
C3': (54.454,145.453,97.250)
O5': (57.230,144.791,96.843)
O4': (55.602,147.169,96.060)
C5': (56.952,145.924,97.658)
P: (58.709,144.236,96.714)
C4': (55.583,146.473,97.339)
C2': (54.336,145.236,95.745)
O2': (53.072,144.773,95.338)
N1: (55.010,146.765,93.833)
O4: (56.058,147.230,89.981)
O2: (52.872,147.208,93.169)
C6: (56.324,146.598,93.463)
C5: (56.740,146.723,92.197)
O3': (53.286,146.073,97.752)
Image (generated by PyMOL):