Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0827:02489
Extra
PDB:
ATOM 1 O3' C A 826 63.239 143.787 91.005 1.00 33.16 O
ATOM 2 P U A 827 61.693 144.132 91.243 1.00 34.99 P
ATOM 3 OP1 U A 827 61.555 144.898 92.501 1.00 33.48 O
ATOM 4 OP2 U A 827 60.915 142.882 91.056 1.00 36.20 O
ATOM 5 O5' U A 827 61.341 145.102 90.031 1.00 34.35 O
ATOM 6 C5' U A 827 61.672 144.744 88.675 1.00 33.28 C
ATOM 7 C4' U A 827 60.464 144.900 87.793 1.00 33.94 C
ATOM 8 O4' U A 827 59.451 143.966 88.221 1.00 35.94 O
ATOM 9 C3' U A 827 59.773 146.246 87.892 1.00 33.59 C
ATOM 10 O3' U A 827 60.420 147.169 87.033 1.00 31.34 O
ATOM 11 C2' U A 827 58.350 145.937 87.437 1.00 34.17 C
ATOM 12 O2' U A 827 58.207 145.959 86.039 1.00 35.63 O
ATOM 13 C1' U A 827 58.172 144.493 87.917 1.00 35.80 C
ATOM 14 N1 U A 827 57.276 144.263 89.062 1.00 36.94 N
ATOM 15 C2 U A 827 55.945 144.626 88.932 1.00 37.67 C
ATOM 16 O2 U A 827 55.502 145.186 87.948 1.00 39.36 O
ATOM 17 N3 U A 827 55.153 144.319 90.006 1.00 37.39 N
ATOM 18 C4 U A 827 55.547 143.724 91.180 1.00 39.13 C
ATOM 19 O4 U A 827 54.714 143.514 92.066 1.00 40.38 O
ATOM 20 C5 U A 827 56.941 143.411 91.250 1.00 39.44 C
ATOM 21 C6 U A 827 57.735 143.684 90.218 1.00 36.85 C
ATOM 22 P A A 828 59.999 148.712 87.057 1.00 31.74 P
ATOM 23 OP1 A A 828 58.923 148.883 88.050 1.00 31.95 O
ATOM 24 OP2 A A 828 59.777 149.126 85.651 1.00 31.90 O
ATOM 25 O5' A A 828 61.299 149.461 87.586 1.00 31.29 O
TER
ATOM 1 O3' C B2488 58.894 143.300 95.308 1.00 36.35 O
ATOM 2 P U B2489 58.801 144.231 96.610 1.00 34.98 P
ATOM 3 OP1 U B2489 59.820 145.284 96.446 1.00 35.12 O
ATOM 4 OP2 U B2489 58.819 143.372 97.821 1.00 35.51 O
ATOM 5 O5' U B2489 57.371 144.912 96.484 1.00 33.57 O
ATOM 6 C5' U B2489 56.923 145.841 97.464 1.00 34.09 C
ATOM 7 C4' U B2489 55.539 146.335 97.133 1.00 36.36 C
ATOM 8 O4' U B2489 55.565 147.110 95.899 1.00 38.09 O
ATOM 9 C3' U B2489 54.466 145.272 96.945 1.00 35.50 C
ATOM 10 O3' U B2489 53.248 145.792 97.439 1.00 37.81 O
ATOM 11 C2' U B2489 54.372 145.158 95.429 1.00 36.16 C
ATOM 12 O2' U B2489 53.104 144.723 94.990 1.00 36.02 O
ATOM 13 C1' U B2489 54.588 146.608 95.013 1.00 36.35 C
ATOM 14 N1 U B2489 55.056 146.783 93.631 1.00 36.40 N
ATOM 15 C2 U B2489 54.103 147.035 92.665 1.00 37.15 C
ATOM 16 O2 U B2489 52.915 147.085 92.904 1.00 39.81 O
ATOM 17 N3 U B2489 54.589 147.222 91.404 1.00 37.58 N
ATOM 18 C4 U B2489 55.900 147.179 91.010 1.00 39.10 C
ATOM 19 O4 U B2489 56.184 147.405 89.832 1.00 41.92 O
ATOM 20 C5 U B2489 56.828 146.893 92.061 1.00 38.24 C
ATOM 21 C6 U B2489 56.383 146.709 93.305 1.00 36.56 C
ATOM 22 P A B2490 52.688 145.302 98.858 1.00 39.50 P
ATOM 23 OP1 A B2490 52.378 146.511 99.629 1.00 41.59 O
ATOM 24 OP2 A B2490 53.564 144.269 99.444 1.00 41.94 O
ATOM 25 O5' A B2490 51.299 144.625 98.517 1.00 38.58 O
TER
ATOM 2 P U A 827 61.693 144.132 91.243 1.00 34.99 P
ATOM 3 OP1 U A 827 61.555 144.898 92.501 1.00 33.48 O
ATOM 4 OP2 U A 827 60.915 142.882 91.056 1.00 36.20 O
ATOM 5 O5' U A 827 61.341 145.102 90.031 1.00 34.35 O
ATOM 6 C5' U A 827 61.672 144.744 88.675 1.00 33.28 C
ATOM 7 C4' U A 827 60.464 144.900 87.793 1.00 33.94 C
ATOM 8 O4' U A 827 59.451 143.966 88.221 1.00 35.94 O
ATOM 9 C3' U A 827 59.773 146.246 87.892 1.00 33.59 C
ATOM 10 O3' U A 827 60.420 147.169 87.033 1.00 31.34 O
ATOM 11 C2' U A 827 58.350 145.937 87.437 1.00 34.17 C
ATOM 12 O2' U A 827 58.207 145.959 86.039 1.00 35.63 O
ATOM 13 C1' U A 827 58.172 144.493 87.917 1.00 35.80 C
ATOM 14 N1 U A 827 57.276 144.263 89.062 1.00 36.94 N
ATOM 15 C2 U A 827 55.945 144.626 88.932 1.00 37.67 C
ATOM 16 O2 U A 827 55.502 145.186 87.948 1.00 39.36 O
ATOM 17 N3 U A 827 55.153 144.319 90.006 1.00 37.39 N
ATOM 18 C4 U A 827 55.547 143.724 91.180 1.00 39.13 C
ATOM 19 O4 U A 827 54.714 143.514 92.066 1.00 40.38 O
ATOM 20 C5 U A 827 56.941 143.411 91.250 1.00 39.44 C
ATOM 21 C6 U A 827 57.735 143.684 90.218 1.00 36.85 C
ATOM 22 P A A 828 59.999 148.712 87.057 1.00 31.74 P
ATOM 23 OP1 A A 828 58.923 148.883 88.050 1.00 31.95 O
ATOM 24 OP2 A A 828 59.777 149.126 85.651 1.00 31.90 O
ATOM 25 O5' A A 828 61.299 149.461 87.586 1.00 31.29 O
TER
ATOM 1 O3' C B2488 58.894 143.300 95.308 1.00 36.35 O
ATOM 2 P U B2489 58.801 144.231 96.610 1.00 34.98 P
ATOM 3 OP1 U B2489 59.820 145.284 96.446 1.00 35.12 O
ATOM 4 OP2 U B2489 58.819 143.372 97.821 1.00 35.51 O
ATOM 5 O5' U B2489 57.371 144.912 96.484 1.00 33.57 O
ATOM 6 C5' U B2489 56.923 145.841 97.464 1.00 34.09 C
ATOM 7 C4' U B2489 55.539 146.335 97.133 1.00 36.36 C
ATOM 8 O4' U B2489 55.565 147.110 95.899 1.00 38.09 O
ATOM 9 C3' U B2489 54.466 145.272 96.945 1.00 35.50 C
ATOM 10 O3' U B2489 53.248 145.792 97.439 1.00 37.81 O
ATOM 11 C2' U B2489 54.372 145.158 95.429 1.00 36.16 C
ATOM 12 O2' U B2489 53.104 144.723 94.990 1.00 36.02 O
ATOM 13 C1' U B2489 54.588 146.608 95.013 1.00 36.35 C
ATOM 14 N1 U B2489 55.056 146.783 93.631 1.00 36.40 N
ATOM 15 C2 U B2489 54.103 147.035 92.665 1.00 37.15 C
ATOM 16 O2 U B2489 52.915 147.085 92.904 1.00 39.81 O
ATOM 17 N3 U B2489 54.589 147.222 91.404 1.00 37.58 N
ATOM 18 C4 U B2489 55.900 147.179 91.010 1.00 39.10 C
ATOM 19 O4 U B2489 56.184 147.405 89.832 1.00 41.92 O
ATOM 20 C5 U B2489 56.828 146.893 92.061 1.00 38.24 C
ATOM 21 C6 U B2489 56.383 146.709 93.305 1.00 36.56 C
ATOM 22 P A B2490 52.688 145.302 98.858 1.00 39.50 P
ATOM 23 OP1 A B2490 52.378 146.511 99.629 1.00 41.59 O
ATOM 24 OP2 A B2490 53.564 144.269 99.444 1.00 41.94 O
ATOM 25 O5' A B2490 51.299 144.625 98.517 1.00 38.58 O
TER
Atoms:
C4: (55.547,143.724,91.180)
N3: (55.153,144.319,90.006)
OP1: (61.555,144.898,92.501)
OP2: (60.915,142.882,91.056)
C2: (55.945,144.626,88.932)
C1': (58.172,144.493,87.917)
C3': (59.773,146.246,87.892)
O5': (61.341,145.102,90.031)
O4': (59.451,143.966,88.221)
C5': (61.672,144.744,88.675)
P: (61.693,144.132,91.243)
C4': (60.464,144.900,87.793)
C2': (58.350,145.937,87.437)
O2': (58.207,145.959,86.039)
N1: (57.276,144.263,89.062)
O4: (54.714,143.514,92.066)
O2: (55.502,145.186,87.948)
C6: (57.735,143.684,90.218)
C5: (56.941,143.411,91.250)
O3': (60.420,147.169,87.033)
N3: (55.153,144.319,90.006)
OP1: (61.555,144.898,92.501)
OP2: (60.915,142.882,91.056)
C2: (55.945,144.626,88.932)
C1': (58.172,144.493,87.917)
C3': (59.773,146.246,87.892)
O5': (61.341,145.102,90.031)
O4': (59.451,143.966,88.221)
C5': (61.672,144.744,88.675)
P: (61.693,144.132,91.243)
C4': (60.464,144.900,87.793)
C2': (58.350,145.937,87.437)
O2': (58.207,145.959,86.039)
N1: (57.276,144.263,89.062)
O4: (54.714,143.514,92.066)
O2: (55.502,145.186,87.948)
C6: (57.735,143.684,90.218)
C5: (56.941,143.411,91.250)
O3': (60.420,147.169,87.033)
C4: (55.900,147.179,91.010)
N3: (54.589,147.222,91.404)
OP1: (59.820,145.284,96.446)
OP2: (58.819,143.372,97.821)
C2: (54.103,147.035,92.665)
C1': (54.588,146.608,95.013)
C3': (54.466,145.272,96.945)
O5': (57.371,144.912,96.484)
O4': (55.565,147.110,95.899)
C5': (56.923,145.841,97.464)
P: (58.801,144.231,96.610)
C4': (55.539,146.335,97.133)
C2': (54.372,145.158,95.429)
O2': (53.104,144.723,94.990)
N1: (55.056,146.783,93.631)
O4: (56.184,147.405,89.832)
O2: (52.915,147.085,92.904)
C6: (56.383,146.709,93.305)
C5: (56.828,146.893,92.061)
O3': (53.248,145.792,97.439)
N3: (54.589,147.222,91.404)
OP1: (59.820,145.284,96.446)
OP2: (58.819,143.372,97.821)
C2: (54.103,147.035,92.665)
C1': (54.588,146.608,95.013)
C3': (54.466,145.272,96.945)
O5': (57.371,144.912,96.484)
O4': (55.565,147.110,95.899)
C5': (56.923,145.841,97.464)
P: (58.801,144.231,96.610)
C4': (55.539,146.335,97.133)
C2': (54.372,145.158,95.429)
O2': (53.104,144.723,94.990)
N1: (55.056,146.783,93.631)
O4: (56.184,147.405,89.832)
O2: (52.915,147.085,92.904)
C6: (56.383,146.709,93.305)
C5: (56.828,146.893,92.061)
O3': (53.248,145.792,97.439)
Image (generated by PyMOL):