Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B17:B19
Extra
PDB:
ATOM 1 O3' G A 16 -10.063 -30.535 58.055 1.00 67.47 O
ATOM 2 P U A 17 -11.410 -31.128 58.678 1.00 67.91 P
ATOM 3 OP1 U A 17 -11.368 -30.912 60.142 1.00 67.96 O
ATOM 4 OP2 U A 17 -11.628 -32.498 58.161 1.00 67.62 O
ATOM 5 O5' U A 17 -12.510 -30.182 58.003 1.00 69.22 O
ATOM 6 C5' U A 17 -12.720 -28.847 58.475 1.00 70.89 C
ATOM 7 C4' U A 17 -14.057 -28.284 58.025 1.00 71.62 C
ATOM 8 O4' U A 17 -14.040 -28.051 56.596 1.00 70.96 O
ATOM 9 C3' U A 17 -15.268 -29.187 58.216 1.00 72.55 C
ATOM 10 O3' U A 17 -15.730 -29.171 59.562 1.00 75.35 O
ATOM 11 C2' U A 17 -16.272 -28.551 57.256 1.00 72.22 C
ATOM 12 O2' U A 17 -16.995 -27.476 57.831 1.00 73.05 O
ATOM 13 C1' U A 17 -15.371 -28.082 56.109 1.00 71.09 C
ATOM 14 N1 U A 17 -15.491 -28.950 54.879 1.00 69.93 N
ATOM 15 C2 U A 17 -16.271 -28.504 53.825 1.00 69.88 C
ATOM 16 O2 U A 17 -16.856 -27.439 53.827 1.00 70.51 O
ATOM 17 N3 U A 17 -16.342 -29.349 52.741 1.00 69.17 N
ATOM 18 C4 U A 17 -15.733 -30.583 52.604 1.00 68.39 C
ATOM 19 O4 U A 17 -15.895 -31.224 51.570 1.00 67.58 O
ATOM 20 C5 U A 17 -14.940 -30.992 53.742 1.00 68.50 C
ATOM 21 C6 U A 17 -14.852 -30.182 54.810 1.00 69.15 C
ATOM 22 P U A 18 -16.560 -30.408 60.146 1.00 77.07 P
ATOM 23 OP1 U A 18 -17.871 -30.440 59.461 1.00 76.89 O
ATOM 24 OP2 U A 18 -16.514 -30.335 61.624 1.00 77.02 O
ATOM 25 O5' U A 18 -15.698 -31.667 59.648 1.00 79.20 O
TER
ATOM 1 O3' U B 18 -15.528 -35.146 58.686 1.00 88.71 O
ATOM 2 P U B 19 -14.320 -36.180 58.893 1.00 89.50 P
ATOM 3 OP1 U B 19 -14.508 -36.931 60.154 1.00 90.02 O
ATOM 4 OP2 U B 19 -13.051 -35.464 58.628 1.00 89.55 O
ATOM 5 O5' U B 19 -14.577 -37.176 57.671 1.00 90.59 O
ATOM 6 C5' U B 19 -15.858 -37.792 57.499 1.00 92.80 C
ATOM 7 C4' U B 19 -16.533 -37.376 56.198 1.00 94.38 C
ATOM 8 O4' U B 19 -17.232 -36.115 56.349 1.00 94.89 O
ATOM 9 C3' U B 19 -15.622 -37.201 54.980 1.00 95.39 C
ATOM 10 O3' U B 19 -16.064 -38.091 53.957 1.00 97.69 O
ATOM 11 C2' U B 19 -15.801 -35.732 54.590 1.00 94.92 C
ATOM 12 O2' U B 19 -15.715 -35.500 53.196 1.00 94.58 O
ATOM 13 C1' U B 19 -17.224 -35.496 55.079 1.00 94.56 C
ATOM 14 N1 U B 19 -17.634 -34.054 55.175 1.00 94.29 N
ATOM 15 C2 U B 19 -18.016 -33.376 54.028 1.00 93.94 C
ATOM 16 O2 U B 19 -18.041 -33.877 52.915 1.00 93.43 O
ATOM 17 N3 U B 19 -18.370 -32.063 54.230 1.00 94.19 N
ATOM 18 C4 U B 19 -18.387 -31.375 55.433 1.00 94.62 C
ATOM 19 O4 U B 19 -18.731 -30.199 55.456 1.00 95.00 O
ATOM 20 C5 U B 19 -17.980 -32.144 56.581 1.00 94.71 C
ATOM 21 C6 U B 19 -17.628 -33.424 56.409 1.00 94.55 C
ATOM 22 P A B 20 -15.032 -38.753 52.929 1.00 99.25 P
ATOM 23 OP1 A B 20 -15.668 -39.992 52.416 1.00 98.67 O
ATOM 24 OP2 A B 20 -13.699 -38.814 53.577 1.00 99.45 O
ATOM 25 O5' A B 20 -14.942 -37.657 51.760 1.00100.21 O
TER
ATOM 2 P U A 17 -11.410 -31.128 58.678 1.00 67.91 P
ATOM 3 OP1 U A 17 -11.368 -30.912 60.142 1.00 67.96 O
ATOM 4 OP2 U A 17 -11.628 -32.498 58.161 1.00 67.62 O
ATOM 5 O5' U A 17 -12.510 -30.182 58.003 1.00 69.22 O
ATOM 6 C5' U A 17 -12.720 -28.847 58.475 1.00 70.89 C
ATOM 7 C4' U A 17 -14.057 -28.284 58.025 1.00 71.62 C
ATOM 8 O4' U A 17 -14.040 -28.051 56.596 1.00 70.96 O
ATOM 9 C3' U A 17 -15.268 -29.187 58.216 1.00 72.55 C
ATOM 10 O3' U A 17 -15.730 -29.171 59.562 1.00 75.35 O
ATOM 11 C2' U A 17 -16.272 -28.551 57.256 1.00 72.22 C
ATOM 12 O2' U A 17 -16.995 -27.476 57.831 1.00 73.05 O
ATOM 13 C1' U A 17 -15.371 -28.082 56.109 1.00 71.09 C
ATOM 14 N1 U A 17 -15.491 -28.950 54.879 1.00 69.93 N
ATOM 15 C2 U A 17 -16.271 -28.504 53.825 1.00 69.88 C
ATOM 16 O2 U A 17 -16.856 -27.439 53.827 1.00 70.51 O
ATOM 17 N3 U A 17 -16.342 -29.349 52.741 1.00 69.17 N
ATOM 18 C4 U A 17 -15.733 -30.583 52.604 1.00 68.39 C
ATOM 19 O4 U A 17 -15.895 -31.224 51.570 1.00 67.58 O
ATOM 20 C5 U A 17 -14.940 -30.992 53.742 1.00 68.50 C
ATOM 21 C6 U A 17 -14.852 -30.182 54.810 1.00 69.15 C
ATOM 22 P U A 18 -16.560 -30.408 60.146 1.00 77.07 P
ATOM 23 OP1 U A 18 -17.871 -30.440 59.461 1.00 76.89 O
ATOM 24 OP2 U A 18 -16.514 -30.335 61.624 1.00 77.02 O
ATOM 25 O5' U A 18 -15.698 -31.667 59.648 1.00 79.20 O
TER
ATOM 1 O3' U B 18 -15.528 -35.146 58.686 1.00 88.71 O
ATOM 2 P U B 19 -14.320 -36.180 58.893 1.00 89.50 P
ATOM 3 OP1 U B 19 -14.508 -36.931 60.154 1.00 90.02 O
ATOM 4 OP2 U B 19 -13.051 -35.464 58.628 1.00 89.55 O
ATOM 5 O5' U B 19 -14.577 -37.176 57.671 1.00 90.59 O
ATOM 6 C5' U B 19 -15.858 -37.792 57.499 1.00 92.80 C
ATOM 7 C4' U B 19 -16.533 -37.376 56.198 1.00 94.38 C
ATOM 8 O4' U B 19 -17.232 -36.115 56.349 1.00 94.89 O
ATOM 9 C3' U B 19 -15.622 -37.201 54.980 1.00 95.39 C
ATOM 10 O3' U B 19 -16.064 -38.091 53.957 1.00 97.69 O
ATOM 11 C2' U B 19 -15.801 -35.732 54.590 1.00 94.92 C
ATOM 12 O2' U B 19 -15.715 -35.500 53.196 1.00 94.58 O
ATOM 13 C1' U B 19 -17.224 -35.496 55.079 1.00 94.56 C
ATOM 14 N1 U B 19 -17.634 -34.054 55.175 1.00 94.29 N
ATOM 15 C2 U B 19 -18.016 -33.376 54.028 1.00 93.94 C
ATOM 16 O2 U B 19 -18.041 -33.877 52.915 1.00 93.43 O
ATOM 17 N3 U B 19 -18.370 -32.063 54.230 1.00 94.19 N
ATOM 18 C4 U B 19 -18.387 -31.375 55.433 1.00 94.62 C
ATOM 19 O4 U B 19 -18.731 -30.199 55.456 1.00 95.00 O
ATOM 20 C5 U B 19 -17.980 -32.144 56.581 1.00 94.71 C
ATOM 21 C6 U B 19 -17.628 -33.424 56.409 1.00 94.55 C
ATOM 22 P A B 20 -15.032 -38.753 52.929 1.00 99.25 P
ATOM 23 OP1 A B 20 -15.668 -39.992 52.416 1.00 98.67 O
ATOM 24 OP2 A B 20 -13.699 -38.814 53.577 1.00 99.45 O
ATOM 25 O5' A B 20 -14.942 -37.657 51.760 1.00100.21 O
TER
Atoms:
C4: (-15.733,-30.583,52.604)
N3: (-16.342,-29.349,52.741)
OP1: (-11.368,-30.912,60.142)
OP2: (-11.628,-32.498,58.161)
C2: (-16.271,-28.504,53.825)
C1': (-15.371,-28.082,56.109)
C3': (-15.268,-29.187,58.216)
O5': (-12.510,-30.182,58.003)
O4': (-14.040,-28.051,56.596)
C5': (-12.720,-28.847,58.475)
P: (-11.410,-31.128,58.678)
C4': (-14.057,-28.284,58.025)
C2': (-16.272,-28.551,57.256)
O2': (-16.995,-27.476,57.831)
N1: (-15.491,-28.950,54.879)
O4: (-15.895,-31.224,51.570)
O2: (-16.856,-27.439,53.827)
C6: (-14.852,-30.182,54.810)
C5: (-14.940,-30.992,53.742)
O3': (-15.730,-29.171,59.562)
N3: (-16.342,-29.349,52.741)
OP1: (-11.368,-30.912,60.142)
OP2: (-11.628,-32.498,58.161)
C2: (-16.271,-28.504,53.825)
C1': (-15.371,-28.082,56.109)
C3': (-15.268,-29.187,58.216)
O5': (-12.510,-30.182,58.003)
O4': (-14.040,-28.051,56.596)
C5': (-12.720,-28.847,58.475)
P: (-11.410,-31.128,58.678)
C4': (-14.057,-28.284,58.025)
C2': (-16.272,-28.551,57.256)
O2': (-16.995,-27.476,57.831)
N1: (-15.491,-28.950,54.879)
O4: (-15.895,-31.224,51.570)
O2: (-16.856,-27.439,53.827)
C6: (-14.852,-30.182,54.810)
C5: (-14.940,-30.992,53.742)
O3': (-15.730,-29.171,59.562)
C4: (-18.387,-31.375,55.433)
N3: (-18.370,-32.063,54.230)
OP1: (-14.508,-36.931,60.154)
OP2: (-13.051,-35.464,58.628)
C2: (-18.016,-33.376,54.028)
C1': (-17.224,-35.496,55.079)
C3': (-15.622,-37.201,54.980)
O5': (-14.577,-37.176,57.671)
O4': (-17.232,-36.115,56.349)
C5': (-15.858,-37.792,57.499)
P: (-14.320,-36.180,58.893)
C4': (-16.533,-37.376,56.198)
C2': (-15.801,-35.732,54.590)
O2': (-15.715,-35.500,53.196)
N1: (-17.634,-34.054,55.175)
O4: (-18.731,-30.199,55.456)
O2: (-18.041,-33.877,52.915)
C6: (-17.628,-33.424,56.409)
C5: (-17.980,-32.144,56.581)
O3': (-16.064,-38.091,53.957)
N3: (-18.370,-32.063,54.230)
OP1: (-14.508,-36.931,60.154)
OP2: (-13.051,-35.464,58.628)
C2: (-18.016,-33.376,54.028)
C1': (-17.224,-35.496,55.079)
C3': (-15.622,-37.201,54.980)
O5': (-14.577,-37.176,57.671)
O4': (-17.232,-36.115,56.349)
C5': (-15.858,-37.792,57.499)
P: (-14.320,-36.180,58.893)
C4': (-16.533,-37.376,56.198)
C2': (-15.801,-35.732,54.590)
O2': (-15.715,-35.500,53.196)
N1: (-17.634,-34.054,55.175)
O4: (-18.731,-30.199,55.456)
O2: (-18.041,-33.877,52.915)
C6: (-17.628,-33.424,56.409)
C5: (-17.980,-32.144,56.581)
O3': (-16.064,-38.091,53.957)
Image (generated by PyMOL):