ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXE:B17:B19

Extra

PDB:
ATOM 1 O3' G A 16 -9.789 -31.129 57.603 1.00 60.32 O
ATOM 2 P U A 17 -11.159 -31.642 58.252 1.00 60.89 P
ATOM 3 OP1 U A 17 -11.087 -31.326 59.697 1.00 61.68 O
ATOM 4 OP2 U A 17 -11.397 -33.041 57.832 1.00 60.37 O
ATOM 5 O5' U A 17 -12.261 -30.716 57.545 1.00 60.98 O
ATOM 6 C5' U A 17 -12.538 -29.408 58.044 1.00 61.85 C
ATOM 7 C4' U A 17 -13.854 -28.850 57.528 1.00 62.38 C
ATOM 8 O4' U A 17 -13.765 -28.610 56.103 1.00 61.64 O
ATOM 9 C3' U A 17 -15.082 -29.745 57.639 1.00 63.10 C
ATOM 10 O3' U A 17 -15.600 -29.786 58.971 1.00 65.48 O
ATOM 11 C2' U A 17 -16.031 -29.057 56.658 1.00 62.48 C
ATOM 12 O2' U A 17 -16.709 -27.946 57.216 1.00 63.08 O
ATOM 13 C1' U A 17 -15.071 -28.619 55.552 1.00 61.34 C
ATOM 14 N1 U A 17 -15.112 -29.499 54.334 1.00 60.02 N
ATOM 15 C2 U A 17 -15.932 -29.149 53.271 1.00 59.72 C
ATOM 16 O2 U A 17 -16.631 -28.153 53.261 1.00 60.09 O
ATOM 17 N3 U A 17 -15.907 -30.010 52.195 1.00 58.77 N
ATOM 18 C4 U A 17 -15.161 -31.171 52.080 1.00 58.34 C
ATOM 19 O4 U A 17 -15.240 -31.847 51.061 1.00 57.70 O
ATOM 20 C5 U A 17 -14.332 -31.474 53.222 1.00 58.90 C
ATOM 21 C6 U A 17 -14.339 -30.648 54.280 1.00 59.50 C
ATOM 22 P U A 18 -16.569 -30.973 59.440 1.00 66.78 P
ATOM 23 OP1 U A 18 -17.814 -30.887 58.643 1.00 66.37 O
ATOM 24 OP2 U A 18 -16.645 -30.926 60.916 1.00 67.26 O
ATOM 25 O5' U A 18 -15.789 -32.304 59.012 1.00 68.10 O
TER

ATOM 1 O3' U B 18 -14.767 -36.372 59.514 1.00 75.04 O
ATOM 2 P U B 19 -13.954 -36.883 58.235 1.00 75.67 P
ATOM 3 OP1 U B 19 -13.616 -38.306 58.463 1.00 75.54 O
ATOM 4 OP2 U B 19 -12.862 -35.920 57.962 1.00 75.50 O
ATOM 5 O5' U B 19 -15.045 -36.762 57.065 1.00 76.09 O
ATOM 6 C5' U B 19 -15.579 -37.915 56.407 1.00 76.58 C
ATOM 7 C4' U B 19 -15.805 -37.656 54.924 1.00 76.82 C
ATOM 8 O4' U B 19 -16.778 -36.594 54.750 1.00 76.62 O
ATOM 9 C3' U B 19 -14.576 -37.232 54.117 1.00 77.54 C
ATOM 10 O3' U B 19 -14.636 -37.771 52.800 1.00 79.20 O
ATOM 11 C2' U B 19 -14.716 -35.716 54.079 1.00 77.20 C
ATOM 12 O2' U B 19 -13.986 -35.129 53.018 1.00 77.08 O
ATOM 13 C1' U B 19 -16.231 -35.630 53.875 1.00 76.47 C
ATOM 14 N1 U B 19 -16.847 -34.298 54.156 1.00 75.71 N
ATOM 15 C2 U B 19 -17.606 -33.703 53.167 1.00 75.00 C
ATOM 16 O2 U B 19 -17.809 -34.204 52.076 1.00 74.36 O
ATOM 17 N3 U B 19 -18.129 -32.480 53.503 1.00 75.15 N
ATOM 18 C4 U B 19 -17.972 -31.810 54.701 1.00 75.44 C
ATOM 19 O4 U B 19 -18.504 -30.718 54.851 1.00 75.57 O
ATOM 20 C5 U B 19 -17.169 -32.491 55.685 1.00 75.72 C
ATOM 21 C6 U B 19 -16.647 -33.686 55.381 1.00 75.71 C
ATOM 22 P A B 20 -14.027 -39.216 52.499 1.00 80.74 P
ATOM 23 OP1 A B 20 -14.976 -40.230 53.018 1.00 80.74 O
ATOM 24 OP2 A B 20 -12.620 -39.214 52.966 1.00 80.84 O
ATOM 25 O5' A B 20 -14.016 -39.282 50.900 1.00 81.29 O
TER

Atoms:
C4: (-15.161,-31.171,52.080)
N3: (-15.907,-30.010,52.195)
OP1: (-11.087,-31.326,59.697)
OP2: (-11.397,-33.041,57.832)
C2: (-15.932,-29.149,53.271)
C1': (-15.071,-28.619,55.552)
C3': (-15.082,-29.745,57.639)
O5': (-12.261,-30.716,57.545)
O4': (-13.765,-28.610,56.103)
C5': (-12.538,-29.408,58.044)
P: (-11.159,-31.642,58.252)
C4': (-13.854,-28.850,57.528)
C2': (-16.031,-29.057,56.658)
O2': (-16.709,-27.946,57.216)
N1: (-15.112,-29.499,54.334)
O4: (-15.240,-31.847,51.061)
O2: (-16.631,-28.153,53.261)
C6: (-14.339,-30.648,54.280)
C5: (-14.332,-31.474,53.222)
O3': (-15.600,-29.786,58.971)
C4: (-17.972,-31.810,54.701)
N3: (-18.129,-32.480,53.503)
OP1: (-13.616,-38.306,58.463)
OP2: (-12.862,-35.920,57.962)
C2: (-17.606,-33.703,53.167)
C1': (-16.231,-35.630,53.875)
C3': (-14.576,-37.232,54.117)
O5': (-15.045,-36.762,57.065)
O4': (-16.778,-36.594,54.750)
C5': (-15.579,-37.915,56.407)
P: (-13.954,-36.883,58.235)
C4': (-15.805,-37.656,54.924)
C2': (-14.716,-35.716,54.079)
O2': (-13.986,-35.129,53.018)
N1: (-16.847,-34.298,54.156)
O4: (-18.504,-30.718,54.851)
O2: (-17.809,-34.204,52.076)
C6: (-16.647,-33.686,55.381)
C5: (-17.169,-32.491,55.685)
O3': (-14.636,-37.771,52.800)
Image (generated by PyMOL):
PyMOL image
show in jmol