Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C21:C18
Extra
PDB:
ATOM 1 O3' A A 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 2 P C A 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 3 OP1 C A 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 4 OP2 C A 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 5 O5' C A 21 18.526 -7.443 29.496 1.00 19.40 O
ATOM 6 C5' C A 21 17.778 -8.595 29.826 1.00 19.64 C
ATOM 7 C4' C A 21 18.364 -9.786 29.125 1.00 19.09 C
ATOM 8 O4' C A 21 18.170 -9.644 27.687 1.00 19.15 O
ATOM 9 C3' C A 21 19.868 -9.911 29.267 1.00 19.18 C
ATOM 10 O3' C A 21 20.234 -10.531 30.487 1.00 22.88 O
ATOM 11 C2' C A 21 20.214 -10.783 28.071 1.00 20.63 C
ATOM 12 O2' C A 21 19.952 -12.157 28.298 1.00 20.98 O
ATOM 13 C1' C A 21 19.281 -10.202 27.003 1.00 17.62 C
ATOM 14 N1 C A 21 19.956 -9.131 26.261 1.00 16.66 N
ATOM 15 C2 C A 21 20.772 -9.481 25.180 1.00 15.98 C
ATOM 16 O2 C A 21 20.865 -10.677 24.863 1.00 17.73 O
ATOM 17 N3 C A 21 21.438 -8.514 24.510 1.00 14.65 N
ATOM 18 C4 C A 21 21.311 -7.241 24.880 1.00 14.23 C
ATOM 19 N4 C A 21 21.993 -6.331 24.195 1.00 15.81 N
ATOM 20 C5 C A 21 20.475 -6.850 25.973 1.00 15.00 C
ATOM 21 C6 C A 21 19.819 -7.820 26.627 1.00 15.11 C
ATOM 22 P U A 22 21.717 -10.323 31.074 1.00 23.65 P
ATOM 23 OP1 U A 22 21.897 -11.265 32.206 1.00 28.09 O
ATOM 24 OP2 U A 22 21.924 -8.872 31.289 1.00 24.13 O
ATOM 25 O5' U A 22 22.697 -10.782 29.908 1.00 24.35 O
TER
ATOM 1 O3' C B 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 2 P G B 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 3 OP1 G B 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 4 OP2 G B 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 5 O5' G B 18 21.224 -4.178 18.033 1.00 19.90 O
ATOM 6 C5' G B 18 20.360 -4.494 19.114 1.00 18.77 C
ATOM 7 C4' G B 18 21.103 -4.310 20.400 1.00 18.66 C
ATOM 8 O4' G B 18 22.110 -5.313 20.507 1.00 21.59 O
ATOM 9 C3' G B 18 21.784 -2.956 20.534 1.00 19.97 C
ATOM 10 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 11 C2' G B 18 23.162 -3.238 21.151 1.00 21.17 C
ATOM 12 O2' G B 18 23.282 -2.782 22.484 1.00 27.63 O
ATOM 13 C1' G B 18 23.239 -4.768 21.135 1.00 21.02 C
ATOM 14 N9 G B 18 24.412 -5.440 20.602 1.00 20.60 N
ATOM 15 C8 G B 18 25.323 -5.017 19.665 1.00 18.30 C
ATOM 16 N7 G B 18 26.241 -5.913 19.415 1.00 20.42 N
ATOM 17 C5 G B 18 25.909 -6.981 20.240 1.00 20.35 C
ATOM 18 C6 G B 18 26.524 -8.246 20.412 1.00 20.65 C
ATOM 19 O6 G B 18 27.518 -8.699 19.851 1.00 23.73 O
ATOM 20 N1 G B 18 25.852 -9.017 21.354 1.00 21.57 N
ATOM 21 C2 G B 18 24.725 -8.627 22.039 1.00 20.53 C
ATOM 22 N2 G B 18 24.206 -9.511 22.904 1.00 20.32 N
ATOM 23 N3 G B 18 24.145 -7.458 21.886 1.00 19.65 N
ATOM 24 C4 G B 18 24.787 -6.693 20.978 1.00 20.49 C
ATOM 25 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 26 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 27 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 28 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
TER
ATOM 2 P C A 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 3 OP1 C A 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 4 OP2 C A 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 5 O5' C A 21 18.526 -7.443 29.496 1.00 19.40 O
ATOM 6 C5' C A 21 17.778 -8.595 29.826 1.00 19.64 C
ATOM 7 C4' C A 21 18.364 -9.786 29.125 1.00 19.09 C
ATOM 8 O4' C A 21 18.170 -9.644 27.687 1.00 19.15 O
ATOM 9 C3' C A 21 19.868 -9.911 29.267 1.00 19.18 C
ATOM 10 O3' C A 21 20.234 -10.531 30.487 1.00 22.88 O
ATOM 11 C2' C A 21 20.214 -10.783 28.071 1.00 20.63 C
ATOM 12 O2' C A 21 19.952 -12.157 28.298 1.00 20.98 O
ATOM 13 C1' C A 21 19.281 -10.202 27.003 1.00 17.62 C
ATOM 14 N1 C A 21 19.956 -9.131 26.261 1.00 16.66 N
ATOM 15 C2 C A 21 20.772 -9.481 25.180 1.00 15.98 C
ATOM 16 O2 C A 21 20.865 -10.677 24.863 1.00 17.73 O
ATOM 17 N3 C A 21 21.438 -8.514 24.510 1.00 14.65 N
ATOM 18 C4 C A 21 21.311 -7.241 24.880 1.00 14.23 C
ATOM 19 N4 C A 21 21.993 -6.331 24.195 1.00 15.81 N
ATOM 20 C5 C A 21 20.475 -6.850 25.973 1.00 15.00 C
ATOM 21 C6 C A 21 19.819 -7.820 26.627 1.00 15.11 C
ATOM 22 P U A 22 21.717 -10.323 31.074 1.00 23.65 P
ATOM 23 OP1 U A 22 21.897 -11.265 32.206 1.00 28.09 O
ATOM 24 OP2 U A 22 21.924 -8.872 31.289 1.00 24.13 O
ATOM 25 O5' U A 22 22.697 -10.782 29.908 1.00 24.35 O
TER
ATOM 1 O3' C B 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 2 P G B 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 3 OP1 G B 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 4 OP2 G B 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 5 O5' G B 18 21.224 -4.178 18.033 1.00 19.90 O
ATOM 6 C5' G B 18 20.360 -4.494 19.114 1.00 18.77 C
ATOM 7 C4' G B 18 21.103 -4.310 20.400 1.00 18.66 C
ATOM 8 O4' G B 18 22.110 -5.313 20.507 1.00 21.59 O
ATOM 9 C3' G B 18 21.784 -2.956 20.534 1.00 19.97 C
ATOM 10 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 11 C2' G B 18 23.162 -3.238 21.151 1.00 21.17 C
ATOM 12 O2' G B 18 23.282 -2.782 22.484 1.00 27.63 O
ATOM 13 C1' G B 18 23.239 -4.768 21.135 1.00 21.02 C
ATOM 14 N9 G B 18 24.412 -5.440 20.602 1.00 20.60 N
ATOM 15 C8 G B 18 25.323 -5.017 19.665 1.00 18.30 C
ATOM 16 N7 G B 18 26.241 -5.913 19.415 1.00 20.42 N
ATOM 17 C5 G B 18 25.909 -6.981 20.240 1.00 20.35 C
ATOM 18 C6 G B 18 26.524 -8.246 20.412 1.00 20.65 C
ATOM 19 O6 G B 18 27.518 -8.699 19.851 1.00 23.73 O
ATOM 20 N1 G B 18 25.852 -9.017 21.354 1.00 21.57 N
ATOM 21 C2 G B 18 24.725 -8.627 22.039 1.00 20.53 C
ATOM 22 N2 G B 18 24.206 -9.511 22.904 1.00 20.32 N
ATOM 23 N3 G B 18 24.145 -7.458 21.886 1.00 19.65 N
ATOM 24 C4 G B 18 24.787 -6.693 20.978 1.00 20.49 C
ATOM 25 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 26 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 27 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 28 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
TER
Atoms:
C2: (20.772,-9.481,25.180)
OP1: (17.638,-6.118,31.382)
OP2: (19.090,-5.020,29.583)
C4: (21.311,-7.241,24.880)
O5': (18.526,-7.443,29.496)
C3': (19.868,-9.911,29.267)
C1': (19.281,-10.202,27.003)
O4': (18.170,-9.644,27.687)
C5': (17.778,-8.595,29.826)
P: (18.058,-6.006,29.969)
O2: (20.865,-10.677,24.863)
C4': (18.364,-9.786,29.125)
C2': (20.214,-10.783,28.071)
O2': (19.952,-12.157,28.298)
N1: (19.956,-9.131,26.261)
N3: (21.438,-8.514,24.510)
N4: (21.993,-6.331,24.195)
C6: (19.819,-7.820,26.627)
C5: (20.475,-6.850,25.973)
O3': (20.234,-10.531,30.487)
OP1: (17.638,-6.118,31.382)
OP2: (19.090,-5.020,29.583)
C4: (21.311,-7.241,24.880)
O5': (18.526,-7.443,29.496)
C3': (19.868,-9.911,29.267)
C1': (19.281,-10.202,27.003)
O4': (18.170,-9.644,27.687)
C5': (17.778,-8.595,29.826)
P: (18.058,-6.006,29.969)
O2: (20.865,-10.677,24.863)
C4': (18.364,-9.786,29.125)
C2': (20.214,-10.783,28.071)
O2': (19.952,-12.157,28.298)
N1: (19.956,-9.131,26.261)
N3: (21.438,-8.514,24.510)
N4: (21.993,-6.331,24.195)
C6: (19.819,-7.820,26.627)
C5: (20.475,-6.850,25.973)
O3': (20.234,-10.531,30.487)
OP1: (22.191,-4.424,15.792)
OP2: (20.598,-6.185,16.712)
C3': (21.784,-2.956,20.534)
C1': (23.239,-4.768,21.135)
C5': (20.360,-4.494,19.114)
O6: (27.518,-8.699,19.851)
O4': (22.110,-5.313,20.507)
C8: (25.323,-5.017,19.665)
C2: (24.725,-8.627,22.039)
C6: (26.524,-8.246,20.412)
C5: (25.909,-6.981,20.240)
C4: (24.787,-6.693,20.978)
P: (20.993,-4.772,16.578)
C4': (21.103,-4.310,20.400)
C2': (23.162,-3.238,21.151)
O2': (23.282,-2.782,22.484)
N1: (25.852,-9.017,21.354)
N2: (24.206,-9.511,22.904)
N3: (24.145,-7.458,21.886)
N7: (26.241,-5.913,19.415)
N9: (24.412,-5.440,20.602)
O5': (21.224,-4.178,18.033)
O3': (20.973,-2.323,21.513)
OP2: (20.598,-6.185,16.712)
C3': (21.784,-2.956,20.534)
C1': (23.239,-4.768,21.135)
C5': (20.360,-4.494,19.114)
O6: (27.518,-8.699,19.851)
O4': (22.110,-5.313,20.507)
C8: (25.323,-5.017,19.665)
C2: (24.725,-8.627,22.039)
C6: (26.524,-8.246,20.412)
C5: (25.909,-6.981,20.240)
C4: (24.787,-6.693,20.978)
P: (20.993,-4.772,16.578)
C4': (21.103,-4.310,20.400)
C2': (23.162,-3.238,21.151)
O2': (23.282,-2.782,22.484)
N1: (25.852,-9.017,21.354)
N2: (24.206,-9.511,22.904)
N3: (24.145,-7.458,21.886)
N7: (26.241,-5.913,19.415)
N9: (24.412,-5.440,20.602)
O5': (21.224,-4.178,18.033)
O3': (20.973,-2.323,21.513)
Image (generated by PyMOL):