Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D21:D18
Extra
PDB:
ATOM 1 O3' A A 20 11.170 -4.918 24.044 1.00 16.82 O
ATOM 2 P C A 21 9.839 -4.955 23.149 1.00 17.60 P
ATOM 3 OP1 C A 21 10.224 -4.618 21.746 1.00 18.39 O
ATOM 4 OP2 C A 21 8.815 -4.144 23.844 1.00 17.51 O
ATOM 5 O5' C A 21 9.382 -6.481 23.206 1.00 20.02 O
ATOM 6 C5' C A 21 10.116 -7.489 22.518 1.00 20.16 C
ATOM 7 C4' C A 21 9.607 -8.858 22.893 1.00 19.71 C
ATOM 8 O4' C A 21 9.868 -9.098 24.299 1.00 19.09 O
ATOM 9 C3' C A 21 8.109 -9.070 22.774 1.00 21.92 C
ATOM 10 O3' C A 21 7.729 -9.337 21.428 1.00 26.47 O
ATOM 11 C2' C A 21 7.922 -10.276 23.683 1.00 21.32 C
ATOM 12 O2' C A 21 8.401 -11.490 23.133 1.00 24.36 O
ATOM 13 C1' C A 21 8.820 -9.882 24.850 1.00 19.20 C
ATOM 14 N1 C A 21 8.089 -9.069 25.838 1.00 16.97 N
ATOM 15 C2 C A 21 7.235 -9.717 26.716 1.00 17.10 C
ATOM 16 O2 C A 21 7.125 -10.954 26.635 1.00 18.30 O
ATOM 17 N3 C A 21 6.548 -8.995 27.629 1.00 17.87 N
ATOM 18 C4 C A 21 6.695 -7.672 27.678 1.00 17.10 C
ATOM 19 N4 C A 21 5.986 -7.001 28.588 1.00 16.40 N
ATOM 20 C5 C A 21 7.569 -6.980 26.794 1.00 15.16 C
ATOM 21 C6 C A 21 8.238 -7.711 25.896 1.00 15.60 C
ATOM 22 P U A 22 6.310 -8.813 20.868 1.00 26.08 P
ATOM 23 OP1 U A 22 6.226 -9.343 19.490 1.00 28.50 O
ATOM 24 OP2 U A 22 6.150 -7.363 21.104 1.00 27.02 O
ATOM 25 O5' U A 22 5.234 -9.568 21.758 1.00 25.15 O
TER
ATOM 1 O3' C B 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 2 P G B 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G B 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G B 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G B 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G B 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G B 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G B 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G B 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G B 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G B 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G B 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G B 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G B 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G B 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G B 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G B 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G B 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G B 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G B 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G B 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G B 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G B 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G B 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A B 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A B 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A B 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A B 19 8.605 -2.308 32.390 1.00 17.52 O
TER
ATOM 2 P C A 21 9.839 -4.955 23.149 1.00 17.60 P
ATOM 3 OP1 C A 21 10.224 -4.618 21.746 1.00 18.39 O
ATOM 4 OP2 C A 21 8.815 -4.144 23.844 1.00 17.51 O
ATOM 5 O5' C A 21 9.382 -6.481 23.206 1.00 20.02 O
ATOM 6 C5' C A 21 10.116 -7.489 22.518 1.00 20.16 C
ATOM 7 C4' C A 21 9.607 -8.858 22.893 1.00 19.71 C
ATOM 8 O4' C A 21 9.868 -9.098 24.299 1.00 19.09 O
ATOM 9 C3' C A 21 8.109 -9.070 22.774 1.00 21.92 C
ATOM 10 O3' C A 21 7.729 -9.337 21.428 1.00 26.47 O
ATOM 11 C2' C A 21 7.922 -10.276 23.683 1.00 21.32 C
ATOM 12 O2' C A 21 8.401 -11.490 23.133 1.00 24.36 O
ATOM 13 C1' C A 21 8.820 -9.882 24.850 1.00 19.20 C
ATOM 14 N1 C A 21 8.089 -9.069 25.838 1.00 16.97 N
ATOM 15 C2 C A 21 7.235 -9.717 26.716 1.00 17.10 C
ATOM 16 O2 C A 21 7.125 -10.954 26.635 1.00 18.30 O
ATOM 17 N3 C A 21 6.548 -8.995 27.629 1.00 17.87 N
ATOM 18 C4 C A 21 6.695 -7.672 27.678 1.00 17.10 C
ATOM 19 N4 C A 21 5.986 -7.001 28.588 1.00 16.40 N
ATOM 20 C5 C A 21 7.569 -6.980 26.794 1.00 15.16 C
ATOM 21 C6 C A 21 8.238 -7.711 25.896 1.00 15.60 C
ATOM 22 P U A 22 6.310 -8.813 20.868 1.00 26.08 P
ATOM 23 OP1 U A 22 6.226 -9.343 19.490 1.00 28.50 O
ATOM 24 OP2 U A 22 6.150 -7.363 21.104 1.00 27.02 O
ATOM 25 O5' U A 22 5.234 -9.568 21.758 1.00 25.15 O
TER
ATOM 1 O3' C B 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 2 P G B 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G B 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G B 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G B 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G B 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G B 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G B 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G B 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G B 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G B 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G B 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G B 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G B 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G B 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G B 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G B 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G B 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G B 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G B 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G B 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G B 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G B 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G B 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A B 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A B 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A B 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A B 19 8.605 -2.308 32.390 1.00 17.52 O
TER
Atoms:
C2: (7.235,-9.717,26.716)
OP1: (10.224,-4.618,21.746)
OP2: (8.815,-4.144,23.844)
C4: (6.695,-7.672,27.678)
O5': (9.382,-6.481,23.206)
C3': (8.109,-9.070,22.774)
C1': (8.820,-9.882,24.850)
O4': (9.868,-9.098,24.299)
C5': (10.116,-7.489,22.518)
P: (9.839,-4.955,23.149)
O2: (7.125,-10.954,26.635)
C4': (9.607,-8.858,22.893)
C2': (7.922,-10.276,23.683)
O2': (8.401,-11.490,23.133)
N1: (8.089,-9.069,25.838)
N3: (6.548,-8.995,27.629)
N4: (5.986,-7.001,28.588)
C6: (8.238,-7.711,25.896)
C5: (7.569,-6.980,26.794)
O3': (7.729,-9.337,21.428)
OP1: (10.224,-4.618,21.746)
OP2: (8.815,-4.144,23.844)
C4: (6.695,-7.672,27.678)
O5': (9.382,-6.481,23.206)
C3': (8.109,-9.070,22.774)
C1': (8.820,-9.882,24.850)
O4': (9.868,-9.098,24.299)
C5': (10.116,-7.489,22.518)
P: (9.839,-4.955,23.149)
O2: (7.125,-10.954,26.635)
C4': (9.607,-8.858,22.893)
C2': (7.922,-10.276,23.683)
O2': (8.401,-11.490,23.133)
N1: (8.089,-9.069,25.838)
N3: (6.548,-8.995,27.629)
N4: (5.986,-7.001,28.588)
C6: (8.238,-7.711,25.896)
C5: (7.569,-6.980,26.794)
O3': (7.729,-9.337,21.428)
OP1: (5.947,-7.665,37.248)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
Image (generated by PyMOL):