Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2607:A1409
Extra
PDB:
ATOM 1 O3' C A2606 11.776 -58.872 19.511 1.00 55.13 O
ATOM 2 P U A2607 10.336 -58.498 18.903 1.00 50.92 P
ATOM 3 OP1 U A2607 9.446 -59.680 19.047 1.00 50.38 O
ATOM 4 OP2 U A2607 10.580 -57.917 17.555 1.00 50.38 O
ATOM 5 O5' U A2607 9.821 -57.314 19.841 1.00 48.60 O
ATOM 6 C5' U A2607 10.660 -56.188 20.101 1.00 47.20 C
ATOM 7 C4' U A2607 10.101 -55.346 21.214 1.00 51.48 C
ATOM 8 O4' U A2607 9.349 -56.139 22.153 1.00 56.03 O
ATOM 9 C3' U A2607 11.134 -54.554 22.014 1.00 53.68 C
ATOM 10 O3' U A2607 10.565 -53.292 22.308 1.00 58.00 O
ATOM 11 C2' U A2607 11.260 -55.370 23.303 1.00 57.97 C
ATOM 12 O2' U A2607 11.584 -54.583 24.441 1.00 59.46 O
ATOM 13 C1' U A2607 9.841 -55.924 23.456 1.00 54.81 C
ATOM 14 N1 U A2607 9.723 -57.171 24.235 1.00 50.95 N
ATOM 15 C2 U A2607 9.943 -57.083 25.601 1.00 49.58 C
ATOM 16 O2 U A2607 10.248 -56.048 26.164 1.00 50.89 O
ATOM 17 N3 U A2607 9.795 -58.253 26.286 1.00 49.71 N
ATOM 18 C4 U A2607 9.458 -59.475 25.765 1.00 55.99 C
ATOM 19 O4 U A2607 9.323 -60.429 26.527 1.00 61.49 O
ATOM 20 C5 U A2607 9.256 -59.495 24.348 1.00 51.71 C
ATOM 21 C6 U A2607 9.392 -58.374 23.647 1.00 50.34 C
ATOM 22 P C A2608 10.096 -52.314 21.113 1.00 53.61 P
ATOM 23 OP1 C A2608 9.669 -53.087 19.914 1.00 43.76 O
ATOM 24 OP2 C A2608 11.158 -51.285 20.977 1.00 70.76 O
ATOM 25 O5' C A2608 8.775 -51.652 21.723 1.00 57.56 O
TER
ATOM 1 O3' C B1408 2.432 -59.631 27.222 1.00 77.55 O
ATOM 2 P A B1409 2.039 -60.082 28.718 1.00 82.36 P
ATOM 3 OP1 A B1409 0.630 -60.589 28.734 1.00 65.42 O
ATOM 4 OP2 A B1409 2.443 -58.988 29.662 1.00 66.75 O
ATOM 5 O5' A B1409 3.039 -61.298 28.965 1.00 76.19 O
ATOM 6 C5' A B1409 2.916 -62.516 28.224 1.00 71.32 C
ATOM 7 C4' A B1409 4.250 -62.951 27.614 1.00 69.42 C
ATOM 8 O4' A B1409 4.575 -62.200 26.408 1.00 71.82 O
ATOM 9 C3' A B1409 5.511 -62.966 28.467 1.00 63.34 C
ATOM 10 O3' A B1409 6.275 -64.113 28.133 1.00 54.02 O
ATOM 11 C2' A B1409 6.295 -61.777 27.941 1.00 59.83 C
ATOM 12 O2' A B1409 7.685 -61.902 28.153 1.00 60.35 O
ATOM 13 C1' A B1409 5.930 -61.797 26.451 1.00 58.00 C
ATOM 14 N9 A B1409 6.030 -60.484 25.804 1.00 54.93 N
ATOM 15 C8 A B1409 6.146 -59.275 26.448 1.00 60.76 C
ATOM 16 N7 A B1409 6.163 -58.242 25.644 1.00 59.93 N
ATOM 17 C5 A B1409 6.060 -58.802 24.380 1.00 55.37 C
ATOM 18 C6 A B1409 6.000 -58.222 23.103 1.00 55.23 C
ATOM 19 N6 A B1409 6.009 -56.903 22.886 1.00 62.20 N
ATOM 20 N1 A B1409 5.911 -59.049 22.043 1.00 53.59 N
ATOM 21 C2 A B1409 5.870 -60.370 22.263 1.00 54.54 C
ATOM 22 N3 A B1409 5.904 -61.039 23.421 1.00 58.93 N
ATOM 23 C4 A B1409 5.999 -60.186 24.457 1.00 55.88 C
ATOM 24 P U B1410 6.940 -64.987 29.294 1.00 57.47 P
ATOM 25 OP1 U B1410 8.072 -65.803 28.778 1.00 54.75 O
ATOM 26 OP2 U B1410 5.790 -65.660 29.955 1.00 68.50 O
ATOM 27 O5' U B1410 7.559 -63.906 30.290 1.00 58.08 O
TER
ATOM 2 P U A2607 10.336 -58.498 18.903 1.00 50.92 P
ATOM 3 OP1 U A2607 9.446 -59.680 19.047 1.00 50.38 O
ATOM 4 OP2 U A2607 10.580 -57.917 17.555 1.00 50.38 O
ATOM 5 O5' U A2607 9.821 -57.314 19.841 1.00 48.60 O
ATOM 6 C5' U A2607 10.660 -56.188 20.101 1.00 47.20 C
ATOM 7 C4' U A2607 10.101 -55.346 21.214 1.00 51.48 C
ATOM 8 O4' U A2607 9.349 -56.139 22.153 1.00 56.03 O
ATOM 9 C3' U A2607 11.134 -54.554 22.014 1.00 53.68 C
ATOM 10 O3' U A2607 10.565 -53.292 22.308 1.00 58.00 O
ATOM 11 C2' U A2607 11.260 -55.370 23.303 1.00 57.97 C
ATOM 12 O2' U A2607 11.584 -54.583 24.441 1.00 59.46 O
ATOM 13 C1' U A2607 9.841 -55.924 23.456 1.00 54.81 C
ATOM 14 N1 U A2607 9.723 -57.171 24.235 1.00 50.95 N
ATOM 15 C2 U A2607 9.943 -57.083 25.601 1.00 49.58 C
ATOM 16 O2 U A2607 10.248 -56.048 26.164 1.00 50.89 O
ATOM 17 N3 U A2607 9.795 -58.253 26.286 1.00 49.71 N
ATOM 18 C4 U A2607 9.458 -59.475 25.765 1.00 55.99 C
ATOM 19 O4 U A2607 9.323 -60.429 26.527 1.00 61.49 O
ATOM 20 C5 U A2607 9.256 -59.495 24.348 1.00 51.71 C
ATOM 21 C6 U A2607 9.392 -58.374 23.647 1.00 50.34 C
ATOM 22 P C A2608 10.096 -52.314 21.113 1.00 53.61 P
ATOM 23 OP1 C A2608 9.669 -53.087 19.914 1.00 43.76 O
ATOM 24 OP2 C A2608 11.158 -51.285 20.977 1.00 70.76 O
ATOM 25 O5' C A2608 8.775 -51.652 21.723 1.00 57.56 O
TER
ATOM 1 O3' C B1408 2.432 -59.631 27.222 1.00 77.55 O
ATOM 2 P A B1409 2.039 -60.082 28.718 1.00 82.36 P
ATOM 3 OP1 A B1409 0.630 -60.589 28.734 1.00 65.42 O
ATOM 4 OP2 A B1409 2.443 -58.988 29.662 1.00 66.75 O
ATOM 5 O5' A B1409 3.039 -61.298 28.965 1.00 76.19 O
ATOM 6 C5' A B1409 2.916 -62.516 28.224 1.00 71.32 C
ATOM 7 C4' A B1409 4.250 -62.951 27.614 1.00 69.42 C
ATOM 8 O4' A B1409 4.575 -62.200 26.408 1.00 71.82 O
ATOM 9 C3' A B1409 5.511 -62.966 28.467 1.00 63.34 C
ATOM 10 O3' A B1409 6.275 -64.113 28.133 1.00 54.02 O
ATOM 11 C2' A B1409 6.295 -61.777 27.941 1.00 59.83 C
ATOM 12 O2' A B1409 7.685 -61.902 28.153 1.00 60.35 O
ATOM 13 C1' A B1409 5.930 -61.797 26.451 1.00 58.00 C
ATOM 14 N9 A B1409 6.030 -60.484 25.804 1.00 54.93 N
ATOM 15 C8 A B1409 6.146 -59.275 26.448 1.00 60.76 C
ATOM 16 N7 A B1409 6.163 -58.242 25.644 1.00 59.93 N
ATOM 17 C5 A B1409 6.060 -58.802 24.380 1.00 55.37 C
ATOM 18 C6 A B1409 6.000 -58.222 23.103 1.00 55.23 C
ATOM 19 N6 A B1409 6.009 -56.903 22.886 1.00 62.20 N
ATOM 20 N1 A B1409 5.911 -59.049 22.043 1.00 53.59 N
ATOM 21 C2 A B1409 5.870 -60.370 22.263 1.00 54.54 C
ATOM 22 N3 A B1409 5.904 -61.039 23.421 1.00 58.93 N
ATOM 23 C4 A B1409 5.999 -60.186 24.457 1.00 55.88 C
ATOM 24 P U B1410 6.940 -64.987 29.294 1.00 57.47 P
ATOM 25 OP1 U B1410 8.072 -65.803 28.778 1.00 54.75 O
ATOM 26 OP2 U B1410 5.790 -65.660 29.955 1.00 68.50 O
ATOM 27 O5' U B1410 7.559 -63.906 30.290 1.00 58.08 O
TER
Atoms:
C4: (9.458,-59.475,25.765)
N3: (9.795,-58.253,26.286)
OP1: (9.446,-59.680,19.047)
OP2: (10.580,-57.917,17.555)
C2: (9.943,-57.083,25.601)
C1': (9.841,-55.924,23.456)
C3': (11.134,-54.554,22.014)
O5': (9.821,-57.314,19.841)
O4': (9.349,-56.139,22.153)
C5': (10.660,-56.188,20.101)
P: (10.336,-58.498,18.903)
C4': (10.101,-55.346,21.214)
C2': (11.260,-55.370,23.303)
O2': (11.584,-54.583,24.441)
N1: (9.723,-57.171,24.235)
O4: (9.323,-60.429,26.527)
O2: (10.248,-56.048,26.164)
C6: (9.392,-58.374,23.647)
C5: (9.256,-59.495,24.348)
O3': (10.565,-53.292,22.308)
N3: (9.795,-58.253,26.286)
OP1: (9.446,-59.680,19.047)
OP2: (10.580,-57.917,17.555)
C2: (9.943,-57.083,25.601)
C1': (9.841,-55.924,23.456)
C3': (11.134,-54.554,22.014)
O5': (9.821,-57.314,19.841)
O4': (9.349,-56.139,22.153)
C5': (10.660,-56.188,20.101)
P: (10.336,-58.498,18.903)
C4': (10.101,-55.346,21.214)
C2': (11.260,-55.370,23.303)
O2': (11.584,-54.583,24.441)
N1: (9.723,-57.171,24.235)
O4: (9.323,-60.429,26.527)
O2: (10.248,-56.048,26.164)
C6: (9.392,-58.374,23.647)
C5: (9.256,-59.495,24.348)
O3': (10.565,-53.292,22.308)
OP1: (0.630,-60.589,28.734)
OP2: (2.443,-58.988,29.662)
C3': (5.511,-62.966,28.467)
C1': (5.930,-61.797,26.451)
C5': (2.916,-62.516,28.224)
O4': (4.575,-62.200,26.408)
C8: (6.146,-59.275,26.448)
O2': (7.685,-61.902,28.153)
C6: (6.000,-58.222,23.103)
C5: (6.060,-58.802,24.380)
C4: (5.999,-60.186,24.457)
P: (2.039,-60.082,28.718)
C4': (4.250,-62.951,27.614)
C2': (6.295,-61.777,27.941)
C2: (5.870,-60.370,22.263)
N1: (5.911,-59.049,22.043)
N3: (5.904,-61.039,23.421)
N6: (6.009,-56.903,22.886)
N7: (6.163,-58.242,25.644)
N9: (6.030,-60.484,25.804)
O5': (3.039,-61.298,28.965)
O3': (6.275,-64.113,28.133)
OP2: (2.443,-58.988,29.662)
C3': (5.511,-62.966,28.467)
C1': (5.930,-61.797,26.451)
C5': (2.916,-62.516,28.224)
O4': (4.575,-62.200,26.408)
C8: (6.146,-59.275,26.448)
O2': (7.685,-61.902,28.153)
C6: (6.000,-58.222,23.103)
C5: (6.060,-58.802,24.380)
C4: (5.999,-60.186,24.457)
P: (2.039,-60.082,28.718)
C4': (4.250,-62.951,27.614)
C2': (6.295,-61.777,27.941)
C2: (5.870,-60.370,22.263)
N1: (5.911,-59.049,22.043)
N3: (5.904,-61.039,23.421)
N6: (6.009,-56.903,22.886)
N7: (6.163,-58.242,25.644)
N9: (6.030,-60.484,25.804)
O5': (3.039,-61.298,28.965)
O3': (6.275,-64.113,28.133)
Image (generated by PyMOL):