Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0221:0220
Extra
PDB:
ATOM 1 O3' A A 220 48.558 101.977 22.014 1.00 45.34 O
ATOM 2 P U A 221 48.824 102.781 20.657 1.00 44.27 P
ATOM 3 OP1 U A 221 47.485 103.195 20.181 1.00 43.13 O
ATOM 4 OP2 U A 221 49.732 102.029 19.757 1.00 41.38 O
ATOM 5 O5' U A 221 49.598 104.066 21.169 1.00 45.27 O
ATOM 6 C5' U A 221 49.026 104.902 22.187 1.00 44.92 C
ATOM 7 C4' U A 221 50.019 105.947 22.595 1.00 44.93 C
ATOM 8 O4' U A 221 51.104 105.340 23.335 1.00 45.52 O
ATOM 9 C3' U A 221 50.706 106.618 21.426 1.00 44.30 C
ATOM 10 O3' U A 221 49.866 107.637 20.915 1.00 46.11 O
ATOM 11 C2' U A 221 51.975 107.152 22.068 1.00 44.00 C
ATOM 12 O2' U A 221 51.728 108.331 22.806 1.00 44.14 O
ATOM 13 C1' U A 221 52.306 106.028 23.054 1.00 43.60 C
ATOM 14 N1 U A 221 53.308 105.056 22.589 1.00 42.10 N
ATOM 15 C2 U A 221 54.637 105.335 22.856 1.00 43.19 C
ATOM 16 O2 U A 221 55.005 106.339 23.450 1.00 45.83 O
ATOM 17 N3 U A 221 55.528 104.397 22.407 1.00 41.36 N
ATOM 18 C4 U A 221 55.243 103.242 21.735 1.00 39.81 C
ATOM 19 O4 U A 221 56.172 102.550 21.318 1.00 39.29 O
ATOM 20 C5 U A 221 53.850 103.016 21.503 1.00 39.73 C
ATOM 21 C6 U A 221 52.953 103.911 21.924 1.00 40.12 C
ATOM 22 P A A 222 49.715 107.823 19.331 1.00 46.77 P
ATOM 23 OP1 A A 222 48.789 108.974 19.143 1.00 44.52 O
ATOM 24 OP2 A A 222 49.403 106.512 18.709 1.00 45.48 O
ATOM 25 O5' A A 222 51.176 108.254 18.866 1.00 46.59 O
TER
ATOM 1 O3' G B 219 49.008 95.202 22.840 1.00 46.84 O
ATOM 2 P A B 220 48.933 96.355 21.724 1.00 49.00 P
ATOM 3 OP1 A B 220 47.618 96.262 21.025 1.00 46.46 O
ATOM 4 OP2 A B 220 50.206 96.336 20.940 1.00 44.96 O
ATOM 5 O5' A B 220 48.888 97.670 22.605 1.00 46.68 O
ATOM 6 C5' A B 220 49.165 98.927 22.040 1.00 44.81 C
ATOM 7 C4' A B 220 49.152 99.957 23.116 1.00 44.92 C
ATOM 8 O4' A B 220 50.083 99.574 24.157 1.00 45.47 O
ATOM 9 C3' A B 220 49.631 101.310 22.654 1.00 44.77 C
ATOM 10 O3' A B 220 48.558 101.977 22.014 1.00 45.34 O
ATOM 11 C2' A B 220 50.109 101.938 23.957 1.00 43.88 C
ATOM 12 O2' A B 220 49.048 102.403 24.768 1.00 42.02 O
ATOM 13 C1' A B 220 50.747 100.725 24.641 1.00 43.00 C
ATOM 14 N9 A B 220 52.172 100.556 24.366 1.00 41.42 N
ATOM 15 C8 A B 220 52.787 99.528 23.695 1.00 40.47 C
ATOM 16 N7 A B 220 54.092 99.632 23.651 1.00 40.37 N
ATOM 17 C5 A B 220 54.354 100.813 24.334 1.00 40.74 C
ATOM 18 C6 A B 220 55.550 101.476 24.658 1.00 40.69 C
ATOM 19 N6 A B 220 56.764 101.020 24.343 1.00 41.54 N
ATOM 20 N1 A B 220 55.456 102.636 25.337 1.00 40.02 N
ATOM 21 C2 A B 220 54.246 103.085 25.674 1.00 39.59 C
ATOM 22 N3 A B 220 53.056 102.551 25.443 1.00 39.60 N
ATOM 23 C4 A B 220 53.179 101.401 24.762 1.00 41.01 C
ATOM 24 P U B 221 48.824 102.781 20.657 1.00 44.27 P
ATOM 25 OP1 U B 221 47.485 103.195 20.181 1.00 43.13 O
ATOM 26 OP2 U B 221 49.732 102.029 19.757 1.00 41.38 O
ATOM 27 O5' U B 221 49.598 104.066 21.169 1.00 45.27 O
TER
ATOM 2 P U A 221 48.824 102.781 20.657 1.00 44.27 P
ATOM 3 OP1 U A 221 47.485 103.195 20.181 1.00 43.13 O
ATOM 4 OP2 U A 221 49.732 102.029 19.757 1.00 41.38 O
ATOM 5 O5' U A 221 49.598 104.066 21.169 1.00 45.27 O
ATOM 6 C5' U A 221 49.026 104.902 22.187 1.00 44.92 C
ATOM 7 C4' U A 221 50.019 105.947 22.595 1.00 44.93 C
ATOM 8 O4' U A 221 51.104 105.340 23.335 1.00 45.52 O
ATOM 9 C3' U A 221 50.706 106.618 21.426 1.00 44.30 C
ATOM 10 O3' U A 221 49.866 107.637 20.915 1.00 46.11 O
ATOM 11 C2' U A 221 51.975 107.152 22.068 1.00 44.00 C
ATOM 12 O2' U A 221 51.728 108.331 22.806 1.00 44.14 O
ATOM 13 C1' U A 221 52.306 106.028 23.054 1.00 43.60 C
ATOM 14 N1 U A 221 53.308 105.056 22.589 1.00 42.10 N
ATOM 15 C2 U A 221 54.637 105.335 22.856 1.00 43.19 C
ATOM 16 O2 U A 221 55.005 106.339 23.450 1.00 45.83 O
ATOM 17 N3 U A 221 55.528 104.397 22.407 1.00 41.36 N
ATOM 18 C4 U A 221 55.243 103.242 21.735 1.00 39.81 C
ATOM 19 O4 U A 221 56.172 102.550 21.318 1.00 39.29 O
ATOM 20 C5 U A 221 53.850 103.016 21.503 1.00 39.73 C
ATOM 21 C6 U A 221 52.953 103.911 21.924 1.00 40.12 C
ATOM 22 P A A 222 49.715 107.823 19.331 1.00 46.77 P
ATOM 23 OP1 A A 222 48.789 108.974 19.143 1.00 44.52 O
ATOM 24 OP2 A A 222 49.403 106.512 18.709 1.00 45.48 O
ATOM 25 O5' A A 222 51.176 108.254 18.866 1.00 46.59 O
TER
ATOM 1 O3' G B 219 49.008 95.202 22.840 1.00 46.84 O
ATOM 2 P A B 220 48.933 96.355 21.724 1.00 49.00 P
ATOM 3 OP1 A B 220 47.618 96.262 21.025 1.00 46.46 O
ATOM 4 OP2 A B 220 50.206 96.336 20.940 1.00 44.96 O
ATOM 5 O5' A B 220 48.888 97.670 22.605 1.00 46.68 O
ATOM 6 C5' A B 220 49.165 98.927 22.040 1.00 44.81 C
ATOM 7 C4' A B 220 49.152 99.957 23.116 1.00 44.92 C
ATOM 8 O4' A B 220 50.083 99.574 24.157 1.00 45.47 O
ATOM 9 C3' A B 220 49.631 101.310 22.654 1.00 44.77 C
ATOM 10 O3' A B 220 48.558 101.977 22.014 1.00 45.34 O
ATOM 11 C2' A B 220 50.109 101.938 23.957 1.00 43.88 C
ATOM 12 O2' A B 220 49.048 102.403 24.768 1.00 42.02 O
ATOM 13 C1' A B 220 50.747 100.725 24.641 1.00 43.00 C
ATOM 14 N9 A B 220 52.172 100.556 24.366 1.00 41.42 N
ATOM 15 C8 A B 220 52.787 99.528 23.695 1.00 40.47 C
ATOM 16 N7 A B 220 54.092 99.632 23.651 1.00 40.37 N
ATOM 17 C5 A B 220 54.354 100.813 24.334 1.00 40.74 C
ATOM 18 C6 A B 220 55.550 101.476 24.658 1.00 40.69 C
ATOM 19 N6 A B 220 56.764 101.020 24.343 1.00 41.54 N
ATOM 20 N1 A B 220 55.456 102.636 25.337 1.00 40.02 N
ATOM 21 C2 A B 220 54.246 103.085 25.674 1.00 39.59 C
ATOM 22 N3 A B 220 53.056 102.551 25.443 1.00 39.60 N
ATOM 23 C4 A B 220 53.179 101.401 24.762 1.00 41.01 C
ATOM 24 P U B 221 48.824 102.781 20.657 1.00 44.27 P
ATOM 25 OP1 U B 221 47.485 103.195 20.181 1.00 43.13 O
ATOM 26 OP2 U B 221 49.732 102.029 19.757 1.00 41.38 O
ATOM 27 O5' U B 221 49.598 104.066 21.169 1.00 45.27 O
TER
Atoms:
C4: (55.243,103.242,21.735)
N3: (55.528,104.397,22.407)
OP1: (47.485,103.195,20.181)
OP2: (49.732,102.029,19.757)
C2: (54.637,105.335,22.856)
C1': (52.306,106.028,23.054)
C3': (50.706,106.618,21.426)
O5': (49.598,104.066,21.169)
O4': (51.104,105.340,23.335)
C5': (49.026,104.902,22.187)
P: (48.824,102.781,20.657)
C4': (50.019,105.947,22.595)
C2': (51.975,107.152,22.068)
O2': (51.728,108.331,22.806)
N1: (53.308,105.056,22.589)
O4: (56.172,102.550,21.318)
O2: (55.005,106.339,23.450)
C6: (52.953,103.911,21.924)
C5: (53.850,103.016,21.503)
O3': (49.866,107.637,20.915)
N3: (55.528,104.397,22.407)
OP1: (47.485,103.195,20.181)
OP2: (49.732,102.029,19.757)
C2: (54.637,105.335,22.856)
C1': (52.306,106.028,23.054)
C3': (50.706,106.618,21.426)
O5': (49.598,104.066,21.169)
O4': (51.104,105.340,23.335)
C5': (49.026,104.902,22.187)
P: (48.824,102.781,20.657)
C4': (50.019,105.947,22.595)
C2': (51.975,107.152,22.068)
O2': (51.728,108.331,22.806)
N1: (53.308,105.056,22.589)
O4: (56.172,102.550,21.318)
O2: (55.005,106.339,23.450)
C6: (52.953,103.911,21.924)
C5: (53.850,103.016,21.503)
O3': (49.866,107.637,20.915)
OP1: (47.618,96.262,21.025)
OP2: (50.206,96.336,20.940)
C3': (49.631,101.310,22.654)
C1': (50.747,100.725,24.641)
C5': (49.165,98.927,22.040)
O4': (50.083,99.574,24.157)
C8: (52.787,99.528,23.695)
O2': (49.048,102.403,24.768)
C6: (55.550,101.476,24.658)
C5: (54.354,100.813,24.334)
C4: (53.179,101.401,24.762)
P: (48.933,96.355,21.724)
C4': (49.152,99.957,23.116)
C2': (50.109,101.938,23.957)
C2: (54.246,103.085,25.674)
N1: (55.456,102.636,25.337)
N3: (53.056,102.551,25.443)
N6: (56.764,101.020,24.343)
N7: (54.092,99.632,23.651)
N9: (52.172,100.556,24.366)
O5': (48.888,97.670,22.605)
O3': (48.558,101.977,22.014)
OP2: (50.206,96.336,20.940)
C3': (49.631,101.310,22.654)
C1': (50.747,100.725,24.641)
C5': (49.165,98.927,22.040)
O4': (50.083,99.574,24.157)
C8: (52.787,99.528,23.695)
O2': (49.048,102.403,24.768)
C6: (55.550,101.476,24.658)
C5: (54.354,100.813,24.334)
C4: (53.179,101.401,24.762)
P: (48.933,96.355,21.724)
C4': (49.152,99.957,23.116)
C2': (50.109,101.938,23.957)
C2: (54.246,103.085,25.674)
N1: (55.456,102.636,25.337)
N3: (53.056,102.551,25.443)
N6: (56.764,101.020,24.343)
N7: (54.092,99.632,23.651)
N9: (52.172,100.556,24.366)
O5': (48.888,97.670,22.605)
O3': (48.558,101.977,22.014)
Image (generated by PyMOL):