Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R22:R99
Extra
PDB:
ATOM 1 O3' A A 21 41.685 -34.308 45.556 1.00 53.72 O
ATOM 2 P C A 22 42.454 -35.114 46.691 1.00 54.91 P
ATOM 3 OP1 C A 22 41.438 -35.614 47.642 1.00 57.30 O
ATOM 4 OP2 C A 22 43.606 -34.327 47.165 1.00 53.29 O
ATOM 5 O5' C A 22 43.011 -36.353 45.857 1.00 57.09 O
ATOM 6 C5' C A 22 43.894 -36.125 44.796 1.00 53.37 C
ATOM 7 C4' C A 22 43.696 -37.213 43.770 1.00 52.04 C
ATOM 8 O4' C A 22 42.540 -36.890 42.964 1.00 47.56 O
ATOM 9 C3' C A 22 44.868 -37.368 42.816 1.00 52.42 C
ATOM 10 O3' C A 22 45.712 -38.408 43.261 1.00 59.20 O
ATOM 11 C2' C A 22 44.229 -37.721 41.480 1.00 49.21 C
ATOM 12 O2' C A 22 44.103 -39.119 41.261 1.00 54.06 O
ATOM 13 C1' C A 22 42.847 -37.092 41.594 1.00 44.76 C
ATOM 14 N1 C A 22 42.660 -35.817 40.833 1.00 36.64 N
ATOM 15 C2 C A 22 42.621 -35.891 39.440 1.00 39.53 C
ATOM 16 O2 C A 22 42.782 -36.987 38.887 1.00 38.04 O
ATOM 17 N3 C A 22 42.413 -34.757 38.731 1.00 38.55 N
ATOM 18 C4 C A 22 42.239 -33.589 39.357 1.00 37.35 C
ATOM 19 N4 C A 22 42.043 -32.502 38.609 1.00 35.02 N
ATOM 20 C5 C A 22 42.276 -33.490 40.772 1.00 35.21 C
ATOM 21 C6 C A 22 42.481 -34.618 41.466 1.00 39.56 C
ATOM 22 P A A 23 46.685 -38.280 44.524 1.00 62.72 P
ATOM 23 OP1 A A 23 45.882 -38.433 45.760 1.00 63.35 O
ATOM 24 OP2 A A 23 47.543 -37.082 44.355 1.00 61.51 O
ATOM 25 O5' A A 23 47.512 -39.646 44.317 1.00 60.73 O
TER
ATOM 1 O3' G B 98 40.240 -26.375 30.859 1.00 42.36 O
ATOM 2 P G B 99 41.312 -27.446 30.380 1.00 43.46 P
ATOM 3 OP1 G B 99 42.451 -26.718 29.792 1.00 42.43 O
ATOM 4 OP2 G B 99 40.635 -28.518 29.623 1.00 44.49 O
ATOM 5 O5' G B 99 41.758 -28.123 31.756 1.00 42.73 O
ATOM 6 C5' G B 99 42.634 -27.477 32.649 1.00 40.03 C
ATOM 7 C4' G B 99 42.969 -28.427 33.782 1.00 37.65 C
ATOM 8 O4' G B 99 41.748 -28.943 34.371 1.00 35.68 O
ATOM 9 C3' G B 99 43.725 -29.674 33.370 1.00 37.35 C
ATOM 10 O3' G B 99 45.111 -29.410 33.161 1.00 35.01 O
ATOM 11 C2' G B 99 43.444 -30.556 34.575 1.00 36.26 C
ATOM 12 O2' G B 99 44.183 -30.204 35.727 1.00 34.63 O
ATOM 13 C1' G B 99 41.959 -30.283 34.766 1.00 36.77 C
ATOM 14 N9 G B 99 41.092 -31.166 33.981 1.00 37.44 N
ATOM 15 C8 G B 99 40.292 -30.845 32.913 1.00 36.09 C
ATOM 16 N7 G B 99 39.636 -31.860 32.431 1.00 35.73 N
ATOM 17 C5 G B 99 40.021 -32.918 33.225 1.00 35.91 C
ATOM 18 C6 G B 99 39.636 -34.274 33.174 1.00 36.04 C
ATOM 19 O6 G B 99 38.852 -34.804 32.376 1.00 37.42 O
ATOM 20 N1 G B 99 40.265 -35.041 34.144 1.00 35.35 N
ATOM 21 C2 G B 99 41.159 -34.533 35.065 1.00 36.58 C
ATOM 22 N2 G B 99 41.674 -35.391 35.958 1.00 34.70 N
ATOM 23 N3 G B 99 41.520 -33.260 35.121 1.00 36.65 N
ATOM 24 C4 G B 99 40.918 -32.513 34.176 1.00 35.68 C
ATOM 25 P U B 100 45.926 -30.094 31.980 1.00 37.14 P
ATOM 26 OP1 U B 100 47.306 -29.585 32.047 1.00 34.60 O
ATOM 27 OP2 U B 100 45.127 -30.017 30.744 1.00 37.14 O
ATOM 28 O5' U B 100 45.956 -31.638 32.388 1.00 36.35 O
TER
ATOM 2 P C A 22 42.454 -35.114 46.691 1.00 54.91 P
ATOM 3 OP1 C A 22 41.438 -35.614 47.642 1.00 57.30 O
ATOM 4 OP2 C A 22 43.606 -34.327 47.165 1.00 53.29 O
ATOM 5 O5' C A 22 43.011 -36.353 45.857 1.00 57.09 O
ATOM 6 C5' C A 22 43.894 -36.125 44.796 1.00 53.37 C
ATOM 7 C4' C A 22 43.696 -37.213 43.770 1.00 52.04 C
ATOM 8 O4' C A 22 42.540 -36.890 42.964 1.00 47.56 O
ATOM 9 C3' C A 22 44.868 -37.368 42.816 1.00 52.42 C
ATOM 10 O3' C A 22 45.712 -38.408 43.261 1.00 59.20 O
ATOM 11 C2' C A 22 44.229 -37.721 41.480 1.00 49.21 C
ATOM 12 O2' C A 22 44.103 -39.119 41.261 1.00 54.06 O
ATOM 13 C1' C A 22 42.847 -37.092 41.594 1.00 44.76 C
ATOM 14 N1 C A 22 42.660 -35.817 40.833 1.00 36.64 N
ATOM 15 C2 C A 22 42.621 -35.891 39.440 1.00 39.53 C
ATOM 16 O2 C A 22 42.782 -36.987 38.887 1.00 38.04 O
ATOM 17 N3 C A 22 42.413 -34.757 38.731 1.00 38.55 N
ATOM 18 C4 C A 22 42.239 -33.589 39.357 1.00 37.35 C
ATOM 19 N4 C A 22 42.043 -32.502 38.609 1.00 35.02 N
ATOM 20 C5 C A 22 42.276 -33.490 40.772 1.00 35.21 C
ATOM 21 C6 C A 22 42.481 -34.618 41.466 1.00 39.56 C
ATOM 22 P A A 23 46.685 -38.280 44.524 1.00 62.72 P
ATOM 23 OP1 A A 23 45.882 -38.433 45.760 1.00 63.35 O
ATOM 24 OP2 A A 23 47.543 -37.082 44.355 1.00 61.51 O
ATOM 25 O5' A A 23 47.512 -39.646 44.317 1.00 60.73 O
TER
ATOM 1 O3' G B 98 40.240 -26.375 30.859 1.00 42.36 O
ATOM 2 P G B 99 41.312 -27.446 30.380 1.00 43.46 P
ATOM 3 OP1 G B 99 42.451 -26.718 29.792 1.00 42.43 O
ATOM 4 OP2 G B 99 40.635 -28.518 29.623 1.00 44.49 O
ATOM 5 O5' G B 99 41.758 -28.123 31.756 1.00 42.73 O
ATOM 6 C5' G B 99 42.634 -27.477 32.649 1.00 40.03 C
ATOM 7 C4' G B 99 42.969 -28.427 33.782 1.00 37.65 C
ATOM 8 O4' G B 99 41.748 -28.943 34.371 1.00 35.68 O
ATOM 9 C3' G B 99 43.725 -29.674 33.370 1.00 37.35 C
ATOM 10 O3' G B 99 45.111 -29.410 33.161 1.00 35.01 O
ATOM 11 C2' G B 99 43.444 -30.556 34.575 1.00 36.26 C
ATOM 12 O2' G B 99 44.183 -30.204 35.727 1.00 34.63 O
ATOM 13 C1' G B 99 41.959 -30.283 34.766 1.00 36.77 C
ATOM 14 N9 G B 99 41.092 -31.166 33.981 1.00 37.44 N
ATOM 15 C8 G B 99 40.292 -30.845 32.913 1.00 36.09 C
ATOM 16 N7 G B 99 39.636 -31.860 32.431 1.00 35.73 N
ATOM 17 C5 G B 99 40.021 -32.918 33.225 1.00 35.91 C
ATOM 18 C6 G B 99 39.636 -34.274 33.174 1.00 36.04 C
ATOM 19 O6 G B 99 38.852 -34.804 32.376 1.00 37.42 O
ATOM 20 N1 G B 99 40.265 -35.041 34.144 1.00 35.35 N
ATOM 21 C2 G B 99 41.159 -34.533 35.065 1.00 36.58 C
ATOM 22 N2 G B 99 41.674 -35.391 35.958 1.00 34.70 N
ATOM 23 N3 G B 99 41.520 -33.260 35.121 1.00 36.65 N
ATOM 24 C4 G B 99 40.918 -32.513 34.176 1.00 35.68 C
ATOM 25 P U B 100 45.926 -30.094 31.980 1.00 37.14 P
ATOM 26 OP1 U B 100 47.306 -29.585 32.047 1.00 34.60 O
ATOM 27 OP2 U B 100 45.127 -30.017 30.744 1.00 37.14 O
ATOM 28 O5' U B 100 45.956 -31.638 32.388 1.00 36.35 O
TER
Atoms:
C2: (42.621,-35.891,39.440)
OP1: (41.438,-35.614,47.642)
OP2: (43.606,-34.327,47.165)
C4: (42.239,-33.589,39.357)
O5': (43.011,-36.353,45.857)
C3': (44.868,-37.368,42.816)
C1': (42.847,-37.092,41.594)
O4': (42.540,-36.890,42.964)
C5': (43.894,-36.125,44.796)
P: (42.454,-35.114,46.691)
O2: (42.782,-36.987,38.887)
C4': (43.696,-37.213,43.770)
C2': (44.229,-37.721,41.480)
O2': (44.103,-39.119,41.261)
N1: (42.660,-35.817,40.833)
N3: (42.413,-34.757,38.731)
N4: (42.043,-32.502,38.609)
C6: (42.481,-34.618,41.466)
C5: (42.276,-33.490,40.772)
O3': (45.712,-38.408,43.261)
OP1: (41.438,-35.614,47.642)
OP2: (43.606,-34.327,47.165)
C4: (42.239,-33.589,39.357)
O5': (43.011,-36.353,45.857)
C3': (44.868,-37.368,42.816)
C1': (42.847,-37.092,41.594)
O4': (42.540,-36.890,42.964)
C5': (43.894,-36.125,44.796)
P: (42.454,-35.114,46.691)
O2: (42.782,-36.987,38.887)
C4': (43.696,-37.213,43.770)
C2': (44.229,-37.721,41.480)
O2': (44.103,-39.119,41.261)
N1: (42.660,-35.817,40.833)
N3: (42.413,-34.757,38.731)
N4: (42.043,-32.502,38.609)
C6: (42.481,-34.618,41.466)
C5: (42.276,-33.490,40.772)
O3': (45.712,-38.408,43.261)
OP1: (42.451,-26.718,29.792)
OP2: (40.635,-28.518,29.623)
C3': (43.725,-29.674,33.370)
C1': (41.959,-30.283,34.766)
C5': (42.634,-27.477,32.649)
O6: (38.852,-34.804,32.376)
O4': (41.748,-28.943,34.371)
C8: (40.292,-30.845,32.913)
C2: (41.159,-34.533,35.065)
C6: (39.636,-34.274,33.174)
C5: (40.021,-32.918,33.225)
C4: (40.918,-32.513,34.176)
P: (41.312,-27.446,30.380)
C4': (42.969,-28.427,33.782)
C2': (43.444,-30.556,34.575)
O2': (44.183,-30.204,35.727)
N1: (40.265,-35.041,34.144)
N2: (41.674,-35.391,35.958)
N3: (41.520,-33.260,35.121)
N7: (39.636,-31.860,32.431)
N9: (41.092,-31.166,33.981)
O5': (41.758,-28.123,31.756)
O3': (45.111,-29.410,33.161)
OP2: (40.635,-28.518,29.623)
C3': (43.725,-29.674,33.370)
C1': (41.959,-30.283,34.766)
C5': (42.634,-27.477,32.649)
O6: (38.852,-34.804,32.376)
O4': (41.748,-28.943,34.371)
C8: (40.292,-30.845,32.913)
C2: (41.159,-34.533,35.065)
C6: (39.636,-34.274,33.174)
C5: (40.021,-32.918,33.225)
C4: (40.918,-32.513,34.176)
P: (41.312,-27.446,30.380)
C4': (42.969,-28.427,33.782)
C2': (43.444,-30.556,34.575)
O2': (44.183,-30.204,35.727)
N1: (40.265,-35.041,34.144)
N2: (41.674,-35.391,35.958)
N3: (41.520,-33.260,35.121)
N7: (39.636,-31.860,32.431)
N9: (41.092,-31.166,33.981)
O5': (41.758,-28.123,31.756)
O3': (45.111,-29.410,33.161)
Image (generated by PyMOL):