Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B46:B43
Extra
PDB:
ATOM 1 O3' A A 45 -165.082 -43.453 31.007 1.00 0.11 O
ATOM 2 P C A 46 -166.004 -44.217 32.065 1.00 0.17 P
ATOM 3 OP1 C A 46 -165.672 -45.658 31.973 1.00 0.17 O
ATOM 4 OP2 C A 46 -167.410 -43.784 31.815 1.00 0.17 O
ATOM 5 O5' C A 46 -165.501 -43.629 33.459 1.00 0.17 O
ATOM 6 C5' C A 46 -164.193 -43.900 33.938 1.00 0.17 C
ATOM 7 C4' C A 46 -163.929 -43.179 35.233 1.00 0.17 C
ATOM 8 O4' C A 46 -163.757 -41.765 34.968 1.00 0.17 O
ATOM 9 C3' C A 46 -165.045 -43.234 36.251 1.00 0.17 C
ATOM 10 O3' C A 46 -164.991 -44.383 37.045 1.00 0.17 O
ATOM 11 C2' C A 46 -164.871 -41.947 37.039 1.00 0.17 C
ATOM 12 O2' C A 46 -163.865 -42.082 38.029 1.00 0.17 O
ATOM 13 C1' C A 46 -164.381 -40.995 35.963 1.00 0.17 C
ATOM 14 N1 C A 46 -165.481 -40.291 35.348 1.00 0.01 N
ATOM 15 C2 C A 46 -165.911 -39.195 36.012 1.00 0.01 C
ATOM 16 O2 C A 46 -165.278 -38.947 37.039 1.00 0.01 O
ATOM 17 N3 C A 46 -166.955 -38.495 35.499 1.00 0.01 N
ATOM 18 C4 C A 46 -167.529 -38.896 34.354 1.00 0.01 C
ATOM 19 N4 C A 46 -168.553 -38.193 33.841 1.00 0.01 N
ATOM 20 C5 C A 46 -167.065 -40.044 33.656 1.00 0.01 C
ATOM 21 C6 C A 46 -166.050 -40.715 34.190 1.00 0.01 C
ATOM 22 P U A 47 -166.307 -45.246 37.251 1.00 3.30 P
ATOM 23 OP1 U A 47 -165.907 -46.459 37.999 1.00 3.30 O
ATOM 24 OP2 U A 47 -166.934 -45.413 35.914 1.00 3.30 O
ATOM 25 O5' U A 47 -167.212 -44.283 38.160 1.00 3.30 O
TER
ATOM 1 O3' C B 42 -167.645 -29.916 31.766 1.00 17.72 O
ATOM 2 P G B 43 -168.071 -30.284 33.256 1.00 10.92 P
ATOM 3 OP1 G B 43 -169.411 -29.671 33.484 1.00 10.92 O
ATOM 4 OP2 G B 43 -166.965 -29.898 34.142 1.00 10.92 O
ATOM 5 O5' G B 43 -168.192 -31.865 33.236 1.00 10.92 O
ATOM 6 C5' G B 43 -167.991 -32.609 32.054 1.00 10.92 C
ATOM 7 C4' G B 43 -168.646 -33.962 32.142 1.00 10.92 C
ATOM 8 O4' G B 43 -168.808 -34.346 33.531 1.00 10.92 O
ATOM 9 C3' G B 43 -170.032 -34.047 31.524 1.00 10.92 C
ATOM 10 O3' G B 43 -170.152 -35.264 30.834 1.00 10.92 O
ATOM 11 C2' G B 43 -170.962 -34.089 32.710 1.00 10.92 C
ATOM 12 O2' G B 43 -172.178 -34.763 32.450 1.00 10.92 O
ATOM 13 C1' G B 43 -170.112 -34.836 33.720 1.00 10.92 C
ATOM 14 N9 G B 43 -170.507 -34.614 35.108 1.00 10.91 N
ATOM 15 C8 G B 43 -171.546 -33.831 35.490 1.00 10.91 C
ATOM 16 N7 G B 43 -171.726 -33.787 36.768 1.00 10.91 N
ATOM 17 C5 G B 43 -170.759 -34.609 37.260 1.00 10.91 C
ATOM 18 C6 G B 43 -170.501 -34.908 38.600 1.00 10.91 C
ATOM 19 O6 G B 43 -171.099 -34.494 39.594 1.00 10.91 O
ATOM 20 N1 G B 43 -169.432 -35.771 38.705 1.00 10.91 N
ATOM 21 C2 G B 43 -168.720 -36.278 37.637 1.00 10.91 C
ATOM 22 N2 G B 43 -167.714 -37.101 37.974 1.00 10.91 N
ATOM 23 N3 G B 43 -168.954 -35.998 36.358 1.00 10.91 N
ATOM 24 C4 G B 43 -169.998 -35.152 36.255 1.00 10.91 C
ATOM 25 P A B 44 -170.658 -35.270 29.319 1.00 11.76 P
ATOM 26 OP1 A B 44 -170.663 -33.841 28.841 1.00 11.79 O
ATOM 27 OP2 A B 44 -171.953 -36.038 29.302 1.00 11.76 O
ATOM 28 O5' A B 44 -169.500 -36.100 28.601 1.00 11.76 O
TER
ATOM 2 P C A 46 -166.004 -44.217 32.065 1.00 0.17 P
ATOM 3 OP1 C A 46 -165.672 -45.658 31.973 1.00 0.17 O
ATOM 4 OP2 C A 46 -167.410 -43.784 31.815 1.00 0.17 O
ATOM 5 O5' C A 46 -165.501 -43.629 33.459 1.00 0.17 O
ATOM 6 C5' C A 46 -164.193 -43.900 33.938 1.00 0.17 C
ATOM 7 C4' C A 46 -163.929 -43.179 35.233 1.00 0.17 C
ATOM 8 O4' C A 46 -163.757 -41.765 34.968 1.00 0.17 O
ATOM 9 C3' C A 46 -165.045 -43.234 36.251 1.00 0.17 C
ATOM 10 O3' C A 46 -164.991 -44.383 37.045 1.00 0.17 O
ATOM 11 C2' C A 46 -164.871 -41.947 37.039 1.00 0.17 C
ATOM 12 O2' C A 46 -163.865 -42.082 38.029 1.00 0.17 O
ATOM 13 C1' C A 46 -164.381 -40.995 35.963 1.00 0.17 C
ATOM 14 N1 C A 46 -165.481 -40.291 35.348 1.00 0.01 N
ATOM 15 C2 C A 46 -165.911 -39.195 36.012 1.00 0.01 C
ATOM 16 O2 C A 46 -165.278 -38.947 37.039 1.00 0.01 O
ATOM 17 N3 C A 46 -166.955 -38.495 35.499 1.00 0.01 N
ATOM 18 C4 C A 46 -167.529 -38.896 34.354 1.00 0.01 C
ATOM 19 N4 C A 46 -168.553 -38.193 33.841 1.00 0.01 N
ATOM 20 C5 C A 46 -167.065 -40.044 33.656 1.00 0.01 C
ATOM 21 C6 C A 46 -166.050 -40.715 34.190 1.00 0.01 C
ATOM 22 P U A 47 -166.307 -45.246 37.251 1.00 3.30 P
ATOM 23 OP1 U A 47 -165.907 -46.459 37.999 1.00 3.30 O
ATOM 24 OP2 U A 47 -166.934 -45.413 35.914 1.00 3.30 O
ATOM 25 O5' U A 47 -167.212 -44.283 38.160 1.00 3.30 O
TER
ATOM 1 O3' C B 42 -167.645 -29.916 31.766 1.00 17.72 O
ATOM 2 P G B 43 -168.071 -30.284 33.256 1.00 10.92 P
ATOM 3 OP1 G B 43 -169.411 -29.671 33.484 1.00 10.92 O
ATOM 4 OP2 G B 43 -166.965 -29.898 34.142 1.00 10.92 O
ATOM 5 O5' G B 43 -168.192 -31.865 33.236 1.00 10.92 O
ATOM 6 C5' G B 43 -167.991 -32.609 32.054 1.00 10.92 C
ATOM 7 C4' G B 43 -168.646 -33.962 32.142 1.00 10.92 C
ATOM 8 O4' G B 43 -168.808 -34.346 33.531 1.00 10.92 O
ATOM 9 C3' G B 43 -170.032 -34.047 31.524 1.00 10.92 C
ATOM 10 O3' G B 43 -170.152 -35.264 30.834 1.00 10.92 O
ATOM 11 C2' G B 43 -170.962 -34.089 32.710 1.00 10.92 C
ATOM 12 O2' G B 43 -172.178 -34.763 32.450 1.00 10.92 O
ATOM 13 C1' G B 43 -170.112 -34.836 33.720 1.00 10.92 C
ATOM 14 N9 G B 43 -170.507 -34.614 35.108 1.00 10.91 N
ATOM 15 C8 G B 43 -171.546 -33.831 35.490 1.00 10.91 C
ATOM 16 N7 G B 43 -171.726 -33.787 36.768 1.00 10.91 N
ATOM 17 C5 G B 43 -170.759 -34.609 37.260 1.00 10.91 C
ATOM 18 C6 G B 43 -170.501 -34.908 38.600 1.00 10.91 C
ATOM 19 O6 G B 43 -171.099 -34.494 39.594 1.00 10.91 O
ATOM 20 N1 G B 43 -169.432 -35.771 38.705 1.00 10.91 N
ATOM 21 C2 G B 43 -168.720 -36.278 37.637 1.00 10.91 C
ATOM 22 N2 G B 43 -167.714 -37.101 37.974 1.00 10.91 N
ATOM 23 N3 G B 43 -168.954 -35.998 36.358 1.00 10.91 N
ATOM 24 C4 G B 43 -169.998 -35.152 36.255 1.00 10.91 C
ATOM 25 P A B 44 -170.658 -35.270 29.319 1.00 11.76 P
ATOM 26 OP1 A B 44 -170.663 -33.841 28.841 1.00 11.79 O
ATOM 27 OP2 A B 44 -171.953 -36.038 29.302 1.00 11.76 O
ATOM 28 O5' A B 44 -169.500 -36.100 28.601 1.00 11.76 O
TER
Atoms:
C2: (-165.911,-39.195,36.012)
OP1: (-165.672,-45.658,31.973)
OP2: (-167.410,-43.784,31.815)
C4: (-167.529,-38.896,34.354)
O5': (-165.501,-43.629,33.459)
C3': (-165.045,-43.234,36.251)
C1': (-164.381,-40.995,35.963)
O4': (-163.757,-41.765,34.968)
C5': (-164.193,-43.900,33.938)
P: (-166.004,-44.217,32.065)
O2: (-165.278,-38.947,37.039)
C4': (-163.929,-43.179,35.233)
C2': (-164.871,-41.947,37.039)
O2': (-163.865,-42.082,38.029)
N1: (-165.481,-40.291,35.348)
N3: (-166.955,-38.495,35.499)
N4: (-168.553,-38.193,33.841)
C6: (-166.050,-40.715,34.190)
C5: (-167.065,-40.044,33.656)
O3': (-164.991,-44.383,37.045)
OP1: (-165.672,-45.658,31.973)
OP2: (-167.410,-43.784,31.815)
C4: (-167.529,-38.896,34.354)
O5': (-165.501,-43.629,33.459)
C3': (-165.045,-43.234,36.251)
C1': (-164.381,-40.995,35.963)
O4': (-163.757,-41.765,34.968)
C5': (-164.193,-43.900,33.938)
P: (-166.004,-44.217,32.065)
O2: (-165.278,-38.947,37.039)
C4': (-163.929,-43.179,35.233)
C2': (-164.871,-41.947,37.039)
O2': (-163.865,-42.082,38.029)
N1: (-165.481,-40.291,35.348)
N3: (-166.955,-38.495,35.499)
N4: (-168.553,-38.193,33.841)
C6: (-166.050,-40.715,34.190)
C5: (-167.065,-40.044,33.656)
O3': (-164.991,-44.383,37.045)
OP1: (-169.411,-29.671,33.484)
OP2: (-166.965,-29.898,34.142)
C3': (-170.032,-34.047,31.524)
C1': (-170.112,-34.836,33.720)
C5': (-167.991,-32.609,32.054)
O6: (-171.099,-34.494,39.594)
O4': (-168.808,-34.346,33.531)
C8: (-171.546,-33.831,35.490)
C2: (-168.720,-36.278,37.637)
C6: (-170.501,-34.908,38.600)
C5: (-170.759,-34.609,37.260)
C4: (-169.998,-35.152,36.255)
P: (-168.071,-30.284,33.256)
C4': (-168.646,-33.962,32.142)
C2': (-170.962,-34.089,32.710)
O2': (-172.178,-34.763,32.450)
N1: (-169.432,-35.771,38.705)
N2: (-167.714,-37.101,37.974)
N3: (-168.954,-35.998,36.358)
N7: (-171.726,-33.787,36.768)
N9: (-170.507,-34.614,35.108)
O5': (-168.192,-31.865,33.236)
O3': (-170.152,-35.264,30.834)
OP2: (-166.965,-29.898,34.142)
C3': (-170.032,-34.047,31.524)
C1': (-170.112,-34.836,33.720)
C5': (-167.991,-32.609,32.054)
O6: (-171.099,-34.494,39.594)
O4': (-168.808,-34.346,33.531)
C8: (-171.546,-33.831,35.490)
C2: (-168.720,-36.278,37.637)
C6: (-170.501,-34.908,38.600)
C5: (-170.759,-34.609,37.260)
C4: (-169.998,-35.152,36.255)
P: (-168.071,-30.284,33.256)
C4': (-168.646,-33.962,32.142)
C2': (-170.962,-34.089,32.710)
O2': (-172.178,-34.763,32.450)
N1: (-169.432,-35.771,38.705)
N2: (-167.714,-37.101,37.974)
N3: (-168.954,-35.998,36.358)
N7: (-171.726,-33.787,36.768)
N9: (-170.507,-34.614,35.108)
O5': (-168.192,-31.865,33.236)
O3': (-170.152,-35.264,30.834)
Image (generated by PyMOL):