Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11142:11093
Extra
PDB:
ATOM 1 O3' A A1141 42.324 -8.215 25.172 1.00 43.18 O
ATOM 2 P C A1142 41.467 -7.412 26.255 1.00 40.81 P
ATOM 3 OP1 C A1142 40.055 -7.797 26.061 1.00 40.91 O
ATOM 4 OP2 C A1142 41.832 -5.992 26.130 1.00 40.83 O
ATOM 5 O5' C A1142 41.982 -8.005 27.647 1.00 40.46 O
ATOM 6 C5' C A1142 41.500 -9.266 28.093 1.00 40.38 C
ATOM 7 C4' C A1142 42.165 -9.728 29.355 1.00 40.07 C
ATOM 8 O4' C A1142 43.598 -9.769 29.178 1.00 40.08 O
ATOM 9 C3' C A1142 41.957 -8.860 30.579 1.00 39.79 C
ATOM 10 O3' C A1142 40.731 -9.133 31.206 1.00 39.70 O
ATOM 11 C2' C A1142 43.123 -9.254 31.444 1.00 39.58 C
ATOM 12 O2' C A1142 42.840 -10.486 32.068 1.00 39.47 O
ATOM 13 C1' C A1142 44.233 -9.474 30.401 1.00 39.79 C
ATOM 14 N1 C A1142 45.096 -8.251 30.234 1.00 39.79 N
ATOM 15 C2 C A1142 46.096 -7.987 31.167 1.00 39.57 C
ATOM 16 O2 C A1142 46.229 -8.818 32.068 1.00 39.39 O
ATOM 17 N3 C A1142 46.877 -6.880 31.073 1.00 39.58 N
ATOM 18 C4 C A1142 46.660 -6.046 30.069 1.00 39.80 C
ATOM 19 N4 C A1142 47.386 -4.953 29.952 1.00 39.83 N
ATOM 20 C5 C A1142 45.684 -6.280 29.092 1.00 40.03 C
ATOM 21 C6 C A1142 44.928 -7.370 29.215 1.00 40.02 C
ATOM 22 P C A1143 39.983 -8.036 32.099 1.00 41.08 P
ATOM 23 OP1 C A1143 40.924 -7.596 33.187 1.00 40.82 O
ATOM 24 OP2 C A1143 38.699 -8.624 32.490 1.00 41.05 O
ATOM 25 O5' C A1143 39.748 -6.855 31.075 1.00 41.30 O
TER
ATOM 1 O3' G B1092 56.604 -1.169 28.343 1.00 34.63 O
ATOM 2 P G B1093 55.552 -0.052 28.852 1.00 41.68 P
ATOM 3 OP1 G B1093 55.331 0.888 27.710 1.00 41.96 O
ATOM 4 OP2 G B1093 56.034 0.484 30.136 1.00 41.43 O
ATOM 5 O5' G B1093 54.241 -0.887 29.113 1.00 41.55 O
ATOM 6 C5' G B1093 53.481 -1.374 28.047 1.00 41.76 C
ATOM 7 C4' G B1093 52.277 -2.072 28.535 1.00 41.61 C
ATOM 8 O4' G B1093 52.650 -3.237 29.292 1.00 41.42 O
ATOM 9 C3' G B1093 51.410 -1.327 29.510 1.00 41.41 C
ATOM 10 O3' G B1093 50.692 -0.264 28.907 1.00 41.57 O
ATOM 11 C2' G B1093 50.531 -2.473 29.991 1.00 41.26 C
ATOM 12 O2' G B1093 49.658 -2.901 28.966 1.00 41.47 O
ATOM 13 C1' G B1093 51.579 -3.566 30.159 1.00 41.21 C
ATOM 14 N9 G B1093 52.040 -3.628 31.541 1.00 40.93 N
ATOM 15 C8 G B1093 53.059 -2.998 32.168 1.00 40.83 C
ATOM 16 N7 G B1093 53.114 -3.271 33.461 1.00 40.57 N
ATOM 17 C5 G B1093 52.009 -4.070 33.662 1.00 40.50 C
ATOM 18 C6 G B1093 51.549 -4.654 34.840 1.00 40.26 C
ATOM 19 O6 G B1093 52.049 -4.554 35.979 1.00 40.06 O
ATOM 20 N1 G B1093 50.429 -5.421 34.559 1.00 40.29 N
ATOM 21 C2 G B1093 49.857 -5.584 33.337 1.00 40.52 C
ATOM 22 N2 G B1093 48.779 -6.368 33.221 1.00 40.53 N
ATOM 23 N3 G B1093 50.303 -5.010 32.262 1.00 40.74 N
ATOM 24 C4 G B1093 51.365 -4.284 32.498 1.00 40.72 C
ATOM 25 P A B1094 50.388 1.128 29.687 1.00 42.93 P
ATOM 26 OP1 A B1094 49.132 0.942 30.470 1.00 42.75 O
ATOM 27 OP2 A B1094 50.449 2.179 28.688 1.00 43.21 O
ATOM 28 O5' A B1094 51.617 1.295 30.658 1.00 42.75 O
TER
ATOM 2 P C A1142 41.467 -7.412 26.255 1.00 40.81 P
ATOM 3 OP1 C A1142 40.055 -7.797 26.061 1.00 40.91 O
ATOM 4 OP2 C A1142 41.832 -5.992 26.130 1.00 40.83 O
ATOM 5 O5' C A1142 41.982 -8.005 27.647 1.00 40.46 O
ATOM 6 C5' C A1142 41.500 -9.266 28.093 1.00 40.38 C
ATOM 7 C4' C A1142 42.165 -9.728 29.355 1.00 40.07 C
ATOM 8 O4' C A1142 43.598 -9.769 29.178 1.00 40.08 O
ATOM 9 C3' C A1142 41.957 -8.860 30.579 1.00 39.79 C
ATOM 10 O3' C A1142 40.731 -9.133 31.206 1.00 39.70 O
ATOM 11 C2' C A1142 43.123 -9.254 31.444 1.00 39.58 C
ATOM 12 O2' C A1142 42.840 -10.486 32.068 1.00 39.47 O
ATOM 13 C1' C A1142 44.233 -9.474 30.401 1.00 39.79 C
ATOM 14 N1 C A1142 45.096 -8.251 30.234 1.00 39.79 N
ATOM 15 C2 C A1142 46.096 -7.987 31.167 1.00 39.57 C
ATOM 16 O2 C A1142 46.229 -8.818 32.068 1.00 39.39 O
ATOM 17 N3 C A1142 46.877 -6.880 31.073 1.00 39.58 N
ATOM 18 C4 C A1142 46.660 -6.046 30.069 1.00 39.80 C
ATOM 19 N4 C A1142 47.386 -4.953 29.952 1.00 39.83 N
ATOM 20 C5 C A1142 45.684 -6.280 29.092 1.00 40.03 C
ATOM 21 C6 C A1142 44.928 -7.370 29.215 1.00 40.02 C
ATOM 22 P C A1143 39.983 -8.036 32.099 1.00 41.08 P
ATOM 23 OP1 C A1143 40.924 -7.596 33.187 1.00 40.82 O
ATOM 24 OP2 C A1143 38.699 -8.624 32.490 1.00 41.05 O
ATOM 25 O5' C A1143 39.748 -6.855 31.075 1.00 41.30 O
TER
ATOM 1 O3' G B1092 56.604 -1.169 28.343 1.00 34.63 O
ATOM 2 P G B1093 55.552 -0.052 28.852 1.00 41.68 P
ATOM 3 OP1 G B1093 55.331 0.888 27.710 1.00 41.96 O
ATOM 4 OP2 G B1093 56.034 0.484 30.136 1.00 41.43 O
ATOM 5 O5' G B1093 54.241 -0.887 29.113 1.00 41.55 O
ATOM 6 C5' G B1093 53.481 -1.374 28.047 1.00 41.76 C
ATOM 7 C4' G B1093 52.277 -2.072 28.535 1.00 41.61 C
ATOM 8 O4' G B1093 52.650 -3.237 29.292 1.00 41.42 O
ATOM 9 C3' G B1093 51.410 -1.327 29.510 1.00 41.41 C
ATOM 10 O3' G B1093 50.692 -0.264 28.907 1.00 41.57 O
ATOM 11 C2' G B1093 50.531 -2.473 29.991 1.00 41.26 C
ATOM 12 O2' G B1093 49.658 -2.901 28.966 1.00 41.47 O
ATOM 13 C1' G B1093 51.579 -3.566 30.159 1.00 41.21 C
ATOM 14 N9 G B1093 52.040 -3.628 31.541 1.00 40.93 N
ATOM 15 C8 G B1093 53.059 -2.998 32.168 1.00 40.83 C
ATOM 16 N7 G B1093 53.114 -3.271 33.461 1.00 40.57 N
ATOM 17 C5 G B1093 52.009 -4.070 33.662 1.00 40.50 C
ATOM 18 C6 G B1093 51.549 -4.654 34.840 1.00 40.26 C
ATOM 19 O6 G B1093 52.049 -4.554 35.979 1.00 40.06 O
ATOM 20 N1 G B1093 50.429 -5.421 34.559 1.00 40.29 N
ATOM 21 C2 G B1093 49.857 -5.584 33.337 1.00 40.52 C
ATOM 22 N2 G B1093 48.779 -6.368 33.221 1.00 40.53 N
ATOM 23 N3 G B1093 50.303 -5.010 32.262 1.00 40.74 N
ATOM 24 C4 G B1093 51.365 -4.284 32.498 1.00 40.72 C
ATOM 25 P A B1094 50.388 1.128 29.687 1.00 42.93 P
ATOM 26 OP1 A B1094 49.132 0.942 30.470 1.00 42.75 O
ATOM 27 OP2 A B1094 50.449 2.179 28.688 1.00 43.21 O
ATOM 28 O5' A B1094 51.617 1.295 30.658 1.00 42.75 O
TER
Atoms:
C2: (46.096,-7.987,31.167)
OP1: (40.055,-7.797,26.061)
OP2: (41.832,-5.992,26.130)
C4: (46.660,-6.046,30.069)
O5': (41.982,-8.005,27.647)
C3': (41.957,-8.860,30.579)
C1': (44.233,-9.474,30.401)
O4': (43.598,-9.769,29.178)
C5': (41.500,-9.266,28.093)
P: (41.467,-7.412,26.255)
O2: (46.229,-8.818,32.068)
C4': (42.165,-9.728,29.355)
C2': (43.123,-9.254,31.444)
O2': (42.840,-10.486,32.068)
N1: (45.096,-8.251,30.234)
N3: (46.877,-6.880,31.073)
N4: (47.386,-4.953,29.952)
C6: (44.928,-7.370,29.215)
C5: (45.684,-6.280,29.092)
O3': (40.731,-9.133,31.206)
OP1: (40.055,-7.797,26.061)
OP2: (41.832,-5.992,26.130)
C4: (46.660,-6.046,30.069)
O5': (41.982,-8.005,27.647)
C3': (41.957,-8.860,30.579)
C1': (44.233,-9.474,30.401)
O4': (43.598,-9.769,29.178)
C5': (41.500,-9.266,28.093)
P: (41.467,-7.412,26.255)
O2: (46.229,-8.818,32.068)
C4': (42.165,-9.728,29.355)
C2': (43.123,-9.254,31.444)
O2': (42.840,-10.486,32.068)
N1: (45.096,-8.251,30.234)
N3: (46.877,-6.880,31.073)
N4: (47.386,-4.953,29.952)
C6: (44.928,-7.370,29.215)
C5: (45.684,-6.280,29.092)
O3': (40.731,-9.133,31.206)
OP1: (55.331,0.888,27.710)
OP2: (56.034,0.484,30.136)
C3': (51.410,-1.327,29.510)
C1': (51.579,-3.566,30.159)
C5': (53.481,-1.374,28.047)
O6: (52.049,-4.554,35.979)
O4': (52.650,-3.237,29.292)
C8: (53.059,-2.998,32.168)
C2: (49.857,-5.584,33.337)
C6: (51.549,-4.654,34.840)
C5: (52.009,-4.070,33.662)
C4: (51.365,-4.284,32.498)
P: (55.552,-0.052,28.852)
C4': (52.277,-2.072,28.535)
C2': (50.531,-2.473,29.991)
O2': (49.658,-2.901,28.966)
N1: (50.429,-5.421,34.559)
N2: (48.779,-6.368,33.221)
N3: (50.303,-5.010,32.262)
N7: (53.114,-3.271,33.461)
N9: (52.040,-3.628,31.541)
O5': (54.241,-0.887,29.113)
O3': (50.692,-0.264,28.907)
OP2: (56.034,0.484,30.136)
C3': (51.410,-1.327,29.510)
C1': (51.579,-3.566,30.159)
C5': (53.481,-1.374,28.047)
O6: (52.049,-4.554,35.979)
O4': (52.650,-3.237,29.292)
C8: (53.059,-2.998,32.168)
C2: (49.857,-5.584,33.337)
C6: (51.549,-4.654,34.840)
C5: (52.009,-4.070,33.662)
C4: (51.365,-4.284,32.498)
P: (55.552,-0.052,28.852)
C4': (52.277,-2.072,28.535)
C2': (50.531,-2.473,29.991)
O2': (49.658,-2.901,28.966)
N1: (50.429,-5.421,34.559)
N2: (48.779,-6.368,33.221)
N3: (50.303,-5.010,32.262)
N7: (53.114,-3.271,33.461)
N9: (52.040,-3.628,31.541)
O5': (54.241,-0.887,29.113)
O3': (50.692,-0.264,28.907)
Image (generated by PyMOL):