Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A555:A554
Extra
PDB:
ATOM 1 O3' A A 554 3.888 90.599 102.555 1.00 44.07 O
ATOM 2 P U A 555 3.359 90.109 103.969 1.00 43.29 P
ATOM 3 OP1 U A 555 4.305 89.097 104.477 1.00 41.29 O
ATOM 4 OP2 U A 555 1.951 89.736 103.710 1.00 43.64 O
ATOM 5 O5' U A 555 3.413 91.418 104.879 1.00 40.93 O
ATOM 6 C5' U A 555 4.656 92.103 105.143 1.00 41.32 C
ATOM 7 C4' U A 555 4.374 93.469 105.694 1.00 42.87 C
ATOM 8 O4' U A 555 3.496 94.143 104.761 1.00 43.80 O
ATOM 9 C3' U A 555 3.588 93.456 106.992 1.00 43.18 C
ATOM 10 O3' U A 555 4.423 93.390 108.139 1.00 43.85 O
ATOM 11 C2' U A 555 2.869 94.785 106.961 1.00 43.52 C
ATOM 12 O2' U A 555 3.733 95.803 107.398 1.00 43.37 O
ATOM 13 C1' U A 555 2.548 94.919 105.472 1.00 43.95 C
ATOM 14 N1 U A 555 1.190 94.466 105.119 1.00 44.93 N
ATOM 15 C2 U A 555 0.178 95.402 105.218 1.00 44.87 C
ATOM 16 O2 U A 555 0.369 96.542 105.631 1.00 44.52 O
ATOM 17 N3 U A 555 -1.063 94.958 104.832 1.00 44.66 N
ATOM 18 C4 U A 555 -1.392 93.694 104.377 1.00 46.41 C
ATOM 19 O4 U A 555 -2.537 93.475 103.974 1.00 48.52 O
ATOM 20 C5 U A 555 -0.297 92.768 104.338 1.00 45.40 C
ATOM 21 C6 U A 555 0.925 93.174 104.698 1.00 44.17 C
ATOM 22 P G A 556 3.845 92.778 109.502 1.00 42.81 P
ATOM 23 OP1 G A 556 4.806 93.010 110.597 1.00 42.58 O
ATOM 24 OP2 G A 556 3.445 91.388 109.166 1.00 42.17 O
ATOM 25 O5' G A 556 2.523 93.616 109.771 1.00 43.01 O
TER
ATOM 1 O3' A B 553 -0.585 91.362 98.277 1.00 52.86 O
ATOM 2 P A B 554 -0.703 90.796 99.778 1.00 53.18 P
ATOM 3 OP1 A B 554 -0.828 89.324 99.559 1.00 51.89 O
ATOM 4 OP2 A B 554 -1.746 91.522 100.547 1.00 52.64 O
ATOM 5 O5' A B 554 0.695 91.129 100.481 1.00 52.51 O
ATOM 6 C5' A B 554 1.932 90.546 100.017 1.00 48.89 C
ATOM 7 C4' A B 554 3.107 91.401 100.430 1.00 46.09 C
ATOM 8 O4' A B 554 2.982 92.723 99.864 1.00 45.66 O
ATOM 9 C3' A B 554 3.238 91.671 101.912 1.00 45.37 C
ATOM 10 O3' A B 554 3.888 90.599 102.555 1.00 44.07 O
ATOM 11 C2' A B 554 4.087 92.933 101.952 1.00 45.35 C
ATOM 12 O2' A B 554 5.466 92.719 101.776 1.00 46.35 O
ATOM 13 C1' A B 554 3.546 93.679 100.746 1.00 45.15 C
ATOM 14 N9 A B 554 2.482 94.555 101.183 1.00 46.33 N
ATOM 15 C8 A B 554 1.153 94.261 101.299 1.00 48.41 C
ATOM 16 N7 A B 554 0.423 95.276 101.687 1.00 49.96 N
ATOM 17 C5 A B 554 1.342 96.302 101.846 1.00 48.50 C
ATOM 18 C6 A B 554 1.200 97.632 102.218 1.00 48.17 C
ATOM 19 N6 A B 554 0.024 98.192 102.478 1.00 47.11 N
ATOM 20 N1 A B 554 2.316 98.387 102.299 1.00 47.86 N
ATOM 21 C2 A B 554 3.493 97.826 102.000 1.00 47.25 C
ATOM 22 N3 A B 554 3.751 96.583 101.616 1.00 48.48 N
ATOM 23 C4 A B 554 2.616 95.865 101.556 1.00 48.01 C
ATOM 24 P U B 555 3.359 90.109 103.969 1.00 43.29 P
ATOM 25 OP1 U B 555 4.305 89.097 104.477 1.00 41.29 O
ATOM 26 OP2 U B 555 1.951 89.736 103.710 1.00 43.64 O
ATOM 27 O5' U B 555 3.413 91.418 104.879 1.00 40.93 O
TER
ATOM 2 P U A 555 3.359 90.109 103.969 1.00 43.29 P
ATOM 3 OP1 U A 555 4.305 89.097 104.477 1.00 41.29 O
ATOM 4 OP2 U A 555 1.951 89.736 103.710 1.00 43.64 O
ATOM 5 O5' U A 555 3.413 91.418 104.879 1.00 40.93 O
ATOM 6 C5' U A 555 4.656 92.103 105.143 1.00 41.32 C
ATOM 7 C4' U A 555 4.374 93.469 105.694 1.00 42.87 C
ATOM 8 O4' U A 555 3.496 94.143 104.761 1.00 43.80 O
ATOM 9 C3' U A 555 3.588 93.456 106.992 1.00 43.18 C
ATOM 10 O3' U A 555 4.423 93.390 108.139 1.00 43.85 O
ATOM 11 C2' U A 555 2.869 94.785 106.961 1.00 43.52 C
ATOM 12 O2' U A 555 3.733 95.803 107.398 1.00 43.37 O
ATOM 13 C1' U A 555 2.548 94.919 105.472 1.00 43.95 C
ATOM 14 N1 U A 555 1.190 94.466 105.119 1.00 44.93 N
ATOM 15 C2 U A 555 0.178 95.402 105.218 1.00 44.87 C
ATOM 16 O2 U A 555 0.369 96.542 105.631 1.00 44.52 O
ATOM 17 N3 U A 555 -1.063 94.958 104.832 1.00 44.66 N
ATOM 18 C4 U A 555 -1.392 93.694 104.377 1.00 46.41 C
ATOM 19 O4 U A 555 -2.537 93.475 103.974 1.00 48.52 O
ATOM 20 C5 U A 555 -0.297 92.768 104.338 1.00 45.40 C
ATOM 21 C6 U A 555 0.925 93.174 104.698 1.00 44.17 C
ATOM 22 P G A 556 3.845 92.778 109.502 1.00 42.81 P
ATOM 23 OP1 G A 556 4.806 93.010 110.597 1.00 42.58 O
ATOM 24 OP2 G A 556 3.445 91.388 109.166 1.00 42.17 O
ATOM 25 O5' G A 556 2.523 93.616 109.771 1.00 43.01 O
TER
ATOM 1 O3' A B 553 -0.585 91.362 98.277 1.00 52.86 O
ATOM 2 P A B 554 -0.703 90.796 99.778 1.00 53.18 P
ATOM 3 OP1 A B 554 -0.828 89.324 99.559 1.00 51.89 O
ATOM 4 OP2 A B 554 -1.746 91.522 100.547 1.00 52.64 O
ATOM 5 O5' A B 554 0.695 91.129 100.481 1.00 52.51 O
ATOM 6 C5' A B 554 1.932 90.546 100.017 1.00 48.89 C
ATOM 7 C4' A B 554 3.107 91.401 100.430 1.00 46.09 C
ATOM 8 O4' A B 554 2.982 92.723 99.864 1.00 45.66 O
ATOM 9 C3' A B 554 3.238 91.671 101.912 1.00 45.37 C
ATOM 10 O3' A B 554 3.888 90.599 102.555 1.00 44.07 O
ATOM 11 C2' A B 554 4.087 92.933 101.952 1.00 45.35 C
ATOM 12 O2' A B 554 5.466 92.719 101.776 1.00 46.35 O
ATOM 13 C1' A B 554 3.546 93.679 100.746 1.00 45.15 C
ATOM 14 N9 A B 554 2.482 94.555 101.183 1.00 46.33 N
ATOM 15 C8 A B 554 1.153 94.261 101.299 1.00 48.41 C
ATOM 16 N7 A B 554 0.423 95.276 101.687 1.00 49.96 N
ATOM 17 C5 A B 554 1.342 96.302 101.846 1.00 48.50 C
ATOM 18 C6 A B 554 1.200 97.632 102.218 1.00 48.17 C
ATOM 19 N6 A B 554 0.024 98.192 102.478 1.00 47.11 N
ATOM 20 N1 A B 554 2.316 98.387 102.299 1.00 47.86 N
ATOM 21 C2 A B 554 3.493 97.826 102.000 1.00 47.25 C
ATOM 22 N3 A B 554 3.751 96.583 101.616 1.00 48.48 N
ATOM 23 C4 A B 554 2.616 95.865 101.556 1.00 48.01 C
ATOM 24 P U B 555 3.359 90.109 103.969 1.00 43.29 P
ATOM 25 OP1 U B 555 4.305 89.097 104.477 1.00 41.29 O
ATOM 26 OP2 U B 555 1.951 89.736 103.710 1.00 43.64 O
ATOM 27 O5' U B 555 3.413 91.418 104.879 1.00 40.93 O
TER
Atoms:
C4: (-1.392,93.694,104.377)
N3: (-1.063,94.958,104.832)
OP1: (4.305,89.097,104.477)
OP2: (1.951,89.736,103.710)
C2: (0.178,95.402,105.218)
C1': (2.548,94.919,105.472)
C3': (3.588,93.456,106.992)
O5': (3.413,91.418,104.879)
O4': (3.496,94.143,104.761)
C5': (4.656,92.103,105.143)
P: (3.359,90.109,103.969)
C4': (4.374,93.469,105.694)
C2': (2.869,94.785,106.961)
O2': (3.733,95.803,107.398)
N1: (1.190,94.466,105.119)
O4: (-2.537,93.475,103.974)
O2: (0.369,96.542,105.631)
C6: (0.925,93.174,104.698)
C5: (-0.297,92.768,104.338)
O3': (4.423,93.390,108.139)
N3: (-1.063,94.958,104.832)
OP1: (4.305,89.097,104.477)
OP2: (1.951,89.736,103.710)
C2: (0.178,95.402,105.218)
C1': (2.548,94.919,105.472)
C3': (3.588,93.456,106.992)
O5': (3.413,91.418,104.879)
O4': (3.496,94.143,104.761)
C5': (4.656,92.103,105.143)
P: (3.359,90.109,103.969)
C4': (4.374,93.469,105.694)
C2': (2.869,94.785,106.961)
O2': (3.733,95.803,107.398)
N1: (1.190,94.466,105.119)
O4: (-2.537,93.475,103.974)
O2: (0.369,96.542,105.631)
C6: (0.925,93.174,104.698)
C5: (-0.297,92.768,104.338)
O3': (4.423,93.390,108.139)
OP1: (-0.828,89.324,99.559)
OP2: (-1.746,91.522,100.547)
C3': (3.238,91.671,101.912)
C1': (3.546,93.679,100.746)
C5': (1.932,90.546,100.017)
O4': (2.982,92.723,99.864)
C8: (1.153,94.261,101.299)
O2': (5.466,92.719,101.776)
C6: (1.200,97.632,102.218)
C5: (1.342,96.302,101.846)
C4: (2.616,95.865,101.556)
P: (-0.703,90.796,99.778)
C4': (3.107,91.401,100.430)
C2': (4.087,92.933,101.952)
C2: (3.493,97.826,102.000)
N1: (2.316,98.387,102.299)
N3: (3.751,96.583,101.616)
N6: (0.024,98.192,102.478)
N7: (0.423,95.276,101.687)
N9: (2.482,94.555,101.183)
O5': (0.695,91.129,100.481)
O3': (3.888,90.599,102.555)
OP2: (-1.746,91.522,100.547)
C3': (3.238,91.671,101.912)
C1': (3.546,93.679,100.746)
C5': (1.932,90.546,100.017)
O4': (2.982,92.723,99.864)
C8: (1.153,94.261,101.299)
O2': (5.466,92.719,101.776)
C6: (1.200,97.632,102.218)
C5: (1.342,96.302,101.846)
C4: (2.616,95.865,101.556)
P: (-0.703,90.796,99.778)
C4': (3.107,91.401,100.430)
C2': (4.087,92.933,101.952)
C2: (3.493,97.826,102.000)
N1: (2.316,98.387,102.299)
N3: (3.751,96.583,101.616)
N6: (0.024,98.192,102.478)
N7: (0.423,95.276,101.687)
N9: (2.482,94.555,101.183)
O5': (0.695,91.129,100.481)
O3': (3.888,90.599,102.555)
Image (generated by PyMOL):