ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:976:9102

Extra

PDB:
ATOM 1 O3' G A 75 44.973 61.685 128.549 1.00 66.55 O
ATOM 2 P A A 76 44.950 63.061 127.701 1.00 66.67 P
ATOM 3 OP1 A A 76 45.600 62.830 126.380 1.00 66.14 O
ATOM 4 OP2 A A 76 45.469 64.128 128.603 1.00 67.04 O
ATOM 5 O5' A A 76 43.414 63.396 127.456 1.00 62.23 O
ATOM 6 C5' A A 76 42.466 62.357 127.264 1.00 60.18 C
ATOM 7 C4' A A 76 41.564 62.677 126.105 1.00 59.69 C
ATOM 8 O4' A A 76 42.336 62.764 124.868 1.00 59.10 O
ATOM 9 C3' A A 76 40.532 61.588 125.870 1.00 60.14 C
ATOM 10 O3' A A 76 39.349 62.170 125.364 1.00 59.62 O
ATOM 11 C2' A A 76 41.199 60.720 124.811 1.00 59.68 C
ATOM 12 O2' A A 76 40.284 59.924 124.081 1.00 61.32 O
ATOM 13 C1' A A 76 41.870 61.790 123.949 1.00 58.10 C
ATOM 14 N9 A A 76 42.997 61.299 123.146 1.00 54.70 N
ATOM 15 C8 A A 76 44.342 61.387 123.410 1.00 53.26 C
ATOM 16 N7 A A 76 45.099 60.842 122.486 1.00 52.30 N
ATOM 17 C5 A A 76 44.191 60.366 121.549 1.00 51.25 C
ATOM 18 C6 A A 76 44.359 59.691 120.325 1.00 51.14 C
ATOM 19 N6 A A 76 45.550 59.374 119.805 1.00 51.18 N
ATOM 20 N1 A A 76 43.248 59.351 119.640 1.00 49.29 N
ATOM 21 C2 A A 76 42.058 59.679 120.151 1.00 49.37 C
ATOM 22 N3 A A 76 41.773 60.316 121.281 1.00 49.13 N
ATOM 23 C4 A A 76 42.896 60.636 121.943 1.00 50.75 C
ATOM 24 P G A 77 37.934 61.715 125.953 1.00 60.11 P
ATOM 25 OP1 G A 77 37.688 62.577 127.139 1.00 57.38 O
ATOM 26 OP2 G A 77 37.940 60.232 126.105 1.00 59.87 O
ATOM 27 O5' G A 77 36.916 62.094 124.786 1.00 57.78 O
TER

ATOM 1 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 2 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 3 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 4 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 5 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
ATOM 6 C5' A B 102 43.800 59.751 116.328 1.00 38.62 C
ATOM 7 C4' A B 102 44.853 60.373 115.442 1.00 39.31 C
ATOM 8 O4' A B 102 44.906 61.809 115.654 1.00 40.34 O
ATOM 9 C3' A B 102 46.253 59.899 115.770 1.00 41.34 C
ATOM 10 O3' A B 102 46.540 58.670 115.136 1.00 42.79 O
ATOM 11 C2' A B 102 47.119 61.046 115.286 1.00 40.68 C
ATOM 12 O2' A B 102 47.285 61.027 113.882 1.00 42.49 O
ATOM 13 C1' A B 102 46.259 62.241 115.693 1.00 39.65 C
ATOM 14 N9 A B 102 46.532 62.711 117.051 1.00 39.96 N
ATOM 15 C8 A B 102 45.647 62.759 118.098 1.00 39.87 C
ATOM 16 N7 A B 102 46.155 63.251 119.196 1.00 41.00 N
ATOM 17 C5 A B 102 47.466 63.543 118.856 1.00 39.71 C
ATOM 18 C6 A B 102 48.523 64.095 119.584 1.00 40.05 C
ATOM 19 N6 A B 102 48.423 64.471 120.860 1.00 40.35 N
ATOM 20 N1 A B 102 49.704 64.254 118.952 1.00 42.45 N
ATOM 21 C2 A B 102 49.800 63.885 117.672 1.00 40.90 C
ATOM 22 N3 A B 102 48.877 63.358 116.880 1.00 42.35 N
ATOM 23 C4 A B 102 47.716 63.209 117.541 1.00 40.54 C
ATOM 24 P A B 103 47.263 57.517 115.969 1.00 42.02 P
ATOM 25 OP1 A B 103 47.582 56.422 115.021 1.00 43.20 O
ATOM 26 OP2 A B 103 46.437 57.239 117.170 1.00 45.15 O
ATOM 27 O5' A B 103 48.609 58.205 116.459 1.00 42.80 O
TER

Atoms:
OP1: (45.600,62.830,126.380)
OP2: (45.469,64.128,128.603)
C3': (40.532,61.588,125.870)
C1': (41.870,61.790,123.949)
C5': (42.466,62.357,127.264)
O4': (42.336,62.764,124.868)
C8: (44.342,61.387,123.410)
O2': (40.284,59.924,124.081)
C6: (44.359,59.691,120.325)
C5: (44.191,60.366,121.549)
C4: (42.896,60.636,121.943)
P: (44.950,63.061,127.701)
C4': (41.564,62.677,126.105)
C2': (41.199,60.720,124.811)
C2: (42.058,59.679,120.151)
N1: (43.248,59.351,119.640)
N3: (41.773,60.316,121.281)
N6: (45.550,59.374,119.805)
N7: (45.099,60.842,122.486)
N9: (42.997,61.299,123.146)
O5': (43.414,63.396,127.456)
O3': (39.349,62.170,125.364)
OP1: (42.242,58.431,114.368)
OP2: (40.212,59.701,115.314)
C3': (46.253,59.899,115.770)
C1': (46.259,62.241,115.693)
C5': (43.800,59.751,116.328)
O4': (44.906,61.809,115.654)
C8: (45.647,62.759,118.098)
O2': (47.285,61.027,113.882)
C6: (48.523,64.095,119.584)
C5: (47.466,63.543,118.856)
C4: (47.716,63.209,117.541)
P: (41.629,59.693,114.858)
C4': (44.853,60.373,115.442)
C2': (47.119,61.046,115.286)
C2: (49.800,63.885,117.672)
N1: (49.704,64.254,118.952)
N3: (48.877,63.358,116.880)
N6: (48.423,64.471,120.860)
N7: (46.155,63.251,119.196)
N9: (46.532,62.711,117.051)
O5': (42.514,60.296,116.035)
O3': (46.540,58.670,115.136)
Image (generated by PyMOL):
PyMOL image
show in jmol