Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0200:0214
Extra
PDB:
ATOM 1 O3' U A 199 56.625 89.039 36.202 1.00 35.03 O
ATOM 2 P A A 200 57.491 88.582 37.478 1.00 37.72 P
ATOM 3 OP1 A A 200 58.895 89.031 37.275 1.00 36.64 O
ATOM 4 OP2 A A 200 57.218 87.141 37.718 1.00 37.72 O
ATOM 5 O5' A A 200 56.847 89.409 38.677 1.00 36.84 O
ATOM 6 C5' A A 200 57.042 89.013 40.044 1.00 33.62 C
ATOM 7 C4' A A 200 57.142 90.234 40.926 1.00 35.96 C
ATOM 8 O4' A A 200 58.346 90.976 40.587 1.00 37.48 O
ATOM 9 C3' A A 200 55.998 91.241 40.826 1.00 35.60 C
ATOM 10 O3' A A 200 55.912 91.892 42.083 1.00 36.50 O
ATOM 11 C2' A A 200 56.543 92.245 39.818 1.00 34.61 C
ATOM 12 O2' A A 200 55.951 93.519 39.919 1.00 34.74 O
ATOM 13 C1' A A 200 58.001 92.307 40.257 1.00 36.55 C
ATOM 14 N9 A A 200 58.945 92.807 39.258 1.00 39.31 N
ATOM 15 C8 A A 200 59.506 92.127 38.209 1.00 40.57 C
ATOM 16 N7 A A 200 60.333 92.847 37.495 1.00 42.04 N
ATOM 17 C5 A A 200 60.311 94.090 38.112 1.00 41.92 C
ATOM 18 C6 A A 200 60.979 95.299 37.833 1.00 41.81 C
ATOM 19 N6 A A 200 61.832 95.456 36.818 1.00 41.09 N
ATOM 20 N1 A A 200 60.737 96.351 38.645 1.00 41.26 N
ATOM 21 C2 A A 200 59.889 96.187 39.665 1.00 40.38 C
ATOM 22 N3 A A 200 59.204 95.105 40.029 1.00 40.49 N
ATOM 23 C4 A A 200 59.461 94.080 39.200 1.00 40.26 C
ATOM 24 P G A 201 54.533 91.923 42.894 1.00 37.83 P
ATOM 25 OP1 G A 201 54.161 90.526 43.227 1.00 36.09 O
ATOM 26 OP2 G A 201 53.572 92.787 42.163 1.00 35.34 O
ATOM 27 O5' G A 201 54.953 92.680 44.234 1.00 37.05 O
TER
ATOM 1 O3' G B 213 65.511 99.071 42.110 1.00 30.29 O
ATOM 2 P A B 214 64.097 99.315 41.380 1.00 32.93 P
ATOM 3 OP1 A B 214 64.310 100.414 40.402 1.00 33.23 O
ATOM 4 OP2 A B 214 63.023 99.455 42.398 1.00 29.57 O
ATOM 5 O5' A B 214 63.870 97.943 40.594 1.00 31.19 O
ATOM 6 C5' A B 214 63.782 97.901 39.159 1.00 29.84 C
ATOM 7 C4' A B 214 65.159 97.771 38.558 1.00 31.90 C
ATOM 8 O4' A B 214 65.904 96.727 39.233 1.00 31.50 O
ATOM 9 C3' A B 214 65.192 97.381 37.091 1.00 31.90 C
ATOM 10 O3' A B 214 65.047 98.513 36.261 1.00 33.36 O
ATOM 11 C2' A B 214 66.567 96.754 36.965 1.00 32.06 C
ATOM 12 O2' A B 214 67.586 97.730 36.931 1.00 32.72 O
ATOM 13 C1' A B 214 66.650 95.982 38.282 1.00 32.82 C
ATOM 14 N9 A B 214 66.030 94.660 38.170 1.00 36.66 N
ATOM 15 C8 A B 214 64.845 94.244 38.734 1.00 36.82 C
ATOM 16 N7 A B 214 64.524 93.010 38.444 1.00 36.58 N
ATOM 17 C5 A B 214 65.564 92.578 37.636 1.00 37.16 C
ATOM 18 C6 A B 214 65.807 91.362 36.997 1.00 38.67 C
ATOM 19 N6 A B 214 64.970 90.321 37.057 1.00 40.61 N
ATOM 20 N1 A B 214 66.944 91.246 36.276 1.00 39.10 N
ATOM 21 C2 A B 214 67.764 92.300 36.199 1.00 38.16 C
ATOM 22 N3 A B 214 67.638 93.504 36.747 1.00 38.49 N
ATOM 23 C4 A B 214 66.503 93.579 37.463 1.00 37.42 C
ATOM 24 P A B 215 64.134 98.423 34.949 1.00 35.02 P
ATOM 25 OP1 A B 215 64.198 99.754 34.292 1.00 31.86 O
ATOM 26 OP2 A B 215 62.815 97.879 35.341 1.00 34.65 O
ATOM 27 O5' A B 215 64.883 97.332 34.060 1.00 31.50 O
TER
ATOM 2 P A A 200 57.491 88.582 37.478 1.00 37.72 P
ATOM 3 OP1 A A 200 58.895 89.031 37.275 1.00 36.64 O
ATOM 4 OP2 A A 200 57.218 87.141 37.718 1.00 37.72 O
ATOM 5 O5' A A 200 56.847 89.409 38.677 1.00 36.84 O
ATOM 6 C5' A A 200 57.042 89.013 40.044 1.00 33.62 C
ATOM 7 C4' A A 200 57.142 90.234 40.926 1.00 35.96 C
ATOM 8 O4' A A 200 58.346 90.976 40.587 1.00 37.48 O
ATOM 9 C3' A A 200 55.998 91.241 40.826 1.00 35.60 C
ATOM 10 O3' A A 200 55.912 91.892 42.083 1.00 36.50 O
ATOM 11 C2' A A 200 56.543 92.245 39.818 1.00 34.61 C
ATOM 12 O2' A A 200 55.951 93.519 39.919 1.00 34.74 O
ATOM 13 C1' A A 200 58.001 92.307 40.257 1.00 36.55 C
ATOM 14 N9 A A 200 58.945 92.807 39.258 1.00 39.31 N
ATOM 15 C8 A A 200 59.506 92.127 38.209 1.00 40.57 C
ATOM 16 N7 A A 200 60.333 92.847 37.495 1.00 42.04 N
ATOM 17 C5 A A 200 60.311 94.090 38.112 1.00 41.92 C
ATOM 18 C6 A A 200 60.979 95.299 37.833 1.00 41.81 C
ATOM 19 N6 A A 200 61.832 95.456 36.818 1.00 41.09 N
ATOM 20 N1 A A 200 60.737 96.351 38.645 1.00 41.26 N
ATOM 21 C2 A A 200 59.889 96.187 39.665 1.00 40.38 C
ATOM 22 N3 A A 200 59.204 95.105 40.029 1.00 40.49 N
ATOM 23 C4 A A 200 59.461 94.080 39.200 1.00 40.26 C
ATOM 24 P G A 201 54.533 91.923 42.894 1.00 37.83 P
ATOM 25 OP1 G A 201 54.161 90.526 43.227 1.00 36.09 O
ATOM 26 OP2 G A 201 53.572 92.787 42.163 1.00 35.34 O
ATOM 27 O5' G A 201 54.953 92.680 44.234 1.00 37.05 O
TER
ATOM 1 O3' G B 213 65.511 99.071 42.110 1.00 30.29 O
ATOM 2 P A B 214 64.097 99.315 41.380 1.00 32.93 P
ATOM 3 OP1 A B 214 64.310 100.414 40.402 1.00 33.23 O
ATOM 4 OP2 A B 214 63.023 99.455 42.398 1.00 29.57 O
ATOM 5 O5' A B 214 63.870 97.943 40.594 1.00 31.19 O
ATOM 6 C5' A B 214 63.782 97.901 39.159 1.00 29.84 C
ATOM 7 C4' A B 214 65.159 97.771 38.558 1.00 31.90 C
ATOM 8 O4' A B 214 65.904 96.727 39.233 1.00 31.50 O
ATOM 9 C3' A B 214 65.192 97.381 37.091 1.00 31.90 C
ATOM 10 O3' A B 214 65.047 98.513 36.261 1.00 33.36 O
ATOM 11 C2' A B 214 66.567 96.754 36.965 1.00 32.06 C
ATOM 12 O2' A B 214 67.586 97.730 36.931 1.00 32.72 O
ATOM 13 C1' A B 214 66.650 95.982 38.282 1.00 32.82 C
ATOM 14 N9 A B 214 66.030 94.660 38.170 1.00 36.66 N
ATOM 15 C8 A B 214 64.845 94.244 38.734 1.00 36.82 C
ATOM 16 N7 A B 214 64.524 93.010 38.444 1.00 36.58 N
ATOM 17 C5 A B 214 65.564 92.578 37.636 1.00 37.16 C
ATOM 18 C6 A B 214 65.807 91.362 36.997 1.00 38.67 C
ATOM 19 N6 A B 214 64.970 90.321 37.057 1.00 40.61 N
ATOM 20 N1 A B 214 66.944 91.246 36.276 1.00 39.10 N
ATOM 21 C2 A B 214 67.764 92.300 36.199 1.00 38.16 C
ATOM 22 N3 A B 214 67.638 93.504 36.747 1.00 38.49 N
ATOM 23 C4 A B 214 66.503 93.579 37.463 1.00 37.42 C
ATOM 24 P A B 215 64.134 98.423 34.949 1.00 35.02 P
ATOM 25 OP1 A B 215 64.198 99.754 34.292 1.00 31.86 O
ATOM 26 OP2 A B 215 62.815 97.879 35.341 1.00 34.65 O
ATOM 27 O5' A B 215 64.883 97.332 34.060 1.00 31.50 O
TER
Atoms:
OP1: (58.895,89.031,37.275)
OP2: (57.218,87.141,37.718)
C3': (55.998,91.241,40.826)
C1': (58.001,92.307,40.257)
C5': (57.042,89.013,40.044)
O4': (58.346,90.976,40.587)
C8: (59.506,92.127,38.209)
O2': (55.951,93.519,39.919)
C6: (60.979,95.299,37.833)
C5: (60.311,94.090,38.112)
C4: (59.461,94.080,39.200)
P: (57.491,88.582,37.478)
C4': (57.142,90.234,40.926)
C2': (56.543,92.245,39.818)
C2: (59.889,96.187,39.665)
N1: (60.737,96.351,38.645)
N3: (59.204,95.105,40.029)
N6: (61.832,95.456,36.818)
N7: (60.333,92.847,37.495)
N9: (58.945,92.807,39.258)
O5': (56.847,89.409,38.677)
O3': (55.912,91.892,42.083)
OP2: (57.218,87.141,37.718)
C3': (55.998,91.241,40.826)
C1': (58.001,92.307,40.257)
C5': (57.042,89.013,40.044)
O4': (58.346,90.976,40.587)
C8: (59.506,92.127,38.209)
O2': (55.951,93.519,39.919)
C6: (60.979,95.299,37.833)
C5: (60.311,94.090,38.112)
C4: (59.461,94.080,39.200)
P: (57.491,88.582,37.478)
C4': (57.142,90.234,40.926)
C2': (56.543,92.245,39.818)
C2: (59.889,96.187,39.665)
N1: (60.737,96.351,38.645)
N3: (59.204,95.105,40.029)
N6: (61.832,95.456,36.818)
N7: (60.333,92.847,37.495)
N9: (58.945,92.807,39.258)
O5': (56.847,89.409,38.677)
O3': (55.912,91.892,42.083)
OP1: (64.310,100.414,40.402)
OP2: (63.023,99.455,42.398)
C3': (65.192,97.381,37.091)
C1': (66.650,95.982,38.282)
C5': (63.782,97.901,39.159)
O4': (65.904,96.727,39.233)
C8: (64.845,94.244,38.734)
O2': (67.586,97.730,36.931)
C6: (65.807,91.362,36.997)
C5: (65.564,92.578,37.636)
C4: (66.503,93.579,37.463)
P: (64.097,99.315,41.380)
C4': (65.159,97.771,38.558)
C2': (66.567,96.754,36.965)
C2: (67.764,92.300,36.199)
N1: (66.944,91.246,36.276)
N3: (67.638,93.504,36.747)
N6: (64.970,90.321,37.057)
N7: (64.524,93.010,38.444)
N9: (66.030,94.660,38.170)
O5': (63.870,97.943,40.594)
O3': (65.047,98.513,36.261)
OP2: (63.023,99.455,42.398)
C3': (65.192,97.381,37.091)
C1': (66.650,95.982,38.282)
C5': (63.782,97.901,39.159)
O4': (65.904,96.727,39.233)
C8: (64.845,94.244,38.734)
O2': (67.586,97.730,36.931)
C6: (65.807,91.362,36.997)
C5: (65.564,92.578,37.636)
C4: (66.503,93.579,37.463)
P: (64.097,99.315,41.380)
C4': (65.159,97.771,38.558)
C2': (66.567,96.754,36.965)
C2: (67.764,92.300,36.199)
N1: (66.944,91.246,36.276)
N3: (67.638,93.504,36.747)
N6: (64.970,90.321,37.057)
N7: (64.524,93.010,38.444)
N9: (66.030,94.660,38.170)
O5': (63.870,97.943,40.594)
O3': (65.047,98.513,36.261)
Image (generated by PyMOL):