ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0972:02148

Extra

PDB:
ATOM 1 O3' A A 971 47.871 59.801 109.805 1.00 40.43 O
ATOM 2 P A A 972 47.612 59.872 108.225 1.00 39.03 P
ATOM 3 OP1 A A 972 46.228 59.414 107.958 1.00 39.43 O
ATOM 4 OP2 A A 972 48.751 59.209 107.540 1.00 39.21 O
ATOM 5 O5' A A 972 47.694 61.432 107.931 1.00 39.78 O
ATOM 6 C5' A A 972 46.507 62.205 107.736 1.00 37.21 C
ATOM 7 C4' A A 972 45.931 62.613 109.062 1.00 35.81 C
ATOM 8 O4' A A 972 46.952 63.257 109.860 1.00 37.29 O
ATOM 9 C3' A A 972 44.829 63.644 108.947 1.00 36.60 C
ATOM 10 O3' A A 972 43.589 63.033 108.655 1.00 36.85 O
ATOM 11 C2' A A 972 44.886 64.337 110.298 1.00 36.68 C
ATOM 12 O2' A A 972 44.268 63.608 111.335 1.00 37.69 O
ATOM 13 C1' A A 972 46.397 64.379 110.533 1.00 37.42 C
ATOM 14 N9 A A 972 47.015 65.580 109.972 1.00 38.21 N
ATOM 15 C8 A A 972 47.996 65.639 109.011 1.00 37.97 C
ATOM 16 N7 A A 972 48.365 66.854 108.707 1.00 38.91 N
ATOM 17 C5 A A 972 47.576 67.657 109.520 1.00 38.37 C
ATOM 18 C6 A A 972 47.498 69.049 109.682 1.00 37.81 C
ATOM 19 N6 A A 972 48.254 69.914 109.007 1.00 35.68 N
ATOM 20 N1 A A 972 46.605 69.529 110.577 1.00 40.83 N
ATOM 21 C2 A A 972 45.851 68.659 111.261 1.00 39.91 C
ATOM 22 N3 A A 972 45.836 67.331 111.200 1.00 40.60 N
ATOM 23 C4 A A 972 46.734 66.886 110.299 1.00 39.16 C
ATOM 24 P A A 973 42.809 63.438 107.314 1.00 38.01 P
ATOM 25 OP1 A A 973 41.587 62.593 107.247 1.00 39.62 O
ATOM 26 OP2 A A 973 43.769 63.396 106.194 1.00 37.58 O
ATOM 27 O5' A A 973 42.382 64.949 107.597 1.00 34.32 O
TER

ATOM 1 O3' A B2147 50.877 72.446 103.857 1.00 37.28 O
ATOM 2 P A B2148 50.154 71.394 102.897 1.00 36.92 P
ATOM 3 OP1 A B2148 50.298 71.833 101.491 1.00 38.37 O
ATOM 4 OP2 A B2148 48.803 71.201 103.465 1.00 39.70 O
ATOM 5 O5' A B2148 50.961 70.038 103.116 1.00 36.75 O
ATOM 6 C5' A B2148 52.304 69.876 102.627 1.00 37.05 C
ATOM 7 C4' A B2148 52.544 68.436 102.234 1.00 37.67 C
ATOM 8 O4' A B2148 52.438 67.581 103.407 1.00 38.46 O
ATOM 9 C3' A B2148 51.524 67.861 101.267 1.00 36.91 C
ATOM 10 O3' A B2148 51.809 68.217 99.921 1.00 36.55 O
ATOM 11 C2' A B2148 51.634 66.365 101.534 1.00 38.02 C
ATOM 12 O2' A B2148 52.747 65.745 100.917 1.00 39.76 O
ATOM 13 C1' A B2148 51.817 66.354 103.054 1.00 38.35 C
ATOM 14 N9 A B2148 50.527 66.285 103.742 1.00 38.30 N
ATOM 15 C8 A B2148 49.827 67.317 104.317 1.00 38.36 C
ATOM 16 N7 A B2148 48.671 66.959 104.818 1.00 39.37 N
ATOM 17 C5 A B2148 48.606 65.596 104.565 1.00 38.50 C
ATOM 18 C6 A B2148 47.625 64.631 104.848 1.00 38.75 C
ATOM 19 N6 A B2148 46.468 64.908 105.458 1.00 35.79 N
ATOM 20 N1 A B2148 47.876 63.356 104.473 1.00 39.02 N
ATOM 21 C2 A B2148 49.033 63.085 103.845 1.00 38.95 C
ATOM 22 N3 A B2148 50.026 63.907 103.518 1.00 38.40 N
ATOM 23 C4 A B2148 49.749 65.163 103.913 1.00 38.52 C
ATOM 24 P A B2149 50.650 68.844 99.000 1.00 34.78 P
ATOM 25 OP1 A B2149 50.924 70.287 98.830 1.00 32.86 O
ATOM 26 OP2 A B2149 49.341 68.407 99.528 1.00 34.08 O
ATOM 27 O5' A B2149 50.876 68.157 97.586 1.00 34.69 O
TER

Atoms:
OP1: (46.228,59.414,107.958)
OP2: (48.751,59.209,107.540)
C3': (44.829,63.644,108.947)
C1': (46.397,64.379,110.533)
C5': (46.507,62.205,107.736)
O4': (46.952,63.257,109.860)
C8: (47.996,65.639,109.011)
O2': (44.268,63.608,111.335)
C6: (47.498,69.049,109.682)
C5: (47.576,67.657,109.520)
C4: (46.734,66.886,110.299)
P: (47.612,59.872,108.225)
C4': (45.931,62.613,109.062)
C2': (44.886,64.337,110.298)
C2: (45.851,68.659,111.261)
N1: (46.605,69.529,110.577)
N3: (45.836,67.331,111.200)
N6: (48.254,69.914,109.007)
N7: (48.365,66.854,108.707)
N9: (47.015,65.580,109.972)
O5': (47.694,61.432,107.931)
O3': (43.589,63.033,108.655)
OP1: (50.298,71.833,101.491)
OP2: (48.803,71.201,103.465)
C3': (51.524,67.861,101.267)
C1': (51.817,66.354,103.054)
C5': (52.304,69.876,102.627)
O4': (52.438,67.581,103.407)
C8: (49.827,67.317,104.317)
O2': (52.747,65.745,100.917)
C6: (47.625,64.631,104.848)
C5: (48.606,65.596,104.565)
C4: (49.749,65.163,103.913)
P: (50.154,71.394,102.897)
C4': (52.544,68.436,102.234)
C2': (51.634,66.365,101.534)
C2: (49.033,63.085,103.845)
N1: (47.876,63.356,104.473)
N3: (50.026,63.907,103.518)
N6: (46.468,64.908,105.458)
N7: (48.671,66.959,104.818)
N9: (50.527,66.285,103.742)
O5': (50.961,70.038,103.116)
O3': (51.809,68.217,99.921)
Image (generated by PyMOL):
PyMOL image
show in jmol