ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0148:0162

Extra

PDB:
ATOM 1 O3' G A 147 80.116 113.906 50.517 1.00 34.05 O
ATOM 2 P A A 148 79.456 112.592 51.143 1.00 34.53 P
ATOM 3 OP1 A A 148 80.344 112.138 52.241 1.00 34.23 O
ATOM 4 OP2 A A 148 79.124 111.669 50.033 1.00 33.87 O
ATOM 5 O5' A A 148 78.093 113.134 51.754 1.00 33.12 O
ATOM 6 C5' A A 148 77.657 112.739 53.061 1.00 31.80 C
ATOM 7 C4' A A 148 77.587 113.940 53.967 1.00 30.23 C
ATOM 8 O4' A A 148 76.764 114.967 53.366 1.00 29.52 O
ATOM 9 C3' A A 148 76.934 113.669 55.302 1.00 29.62 C
ATOM 10 O3' A A 148 77.873 113.112 56.200 1.00 31.03 O
ATOM 11 C2' A A 148 76.436 115.043 55.719 1.00 28.72 C
ATOM 12 O2' A A 148 77.427 115.862 56.295 1.00 28.34 O
ATOM 13 C1' A A 148 76.019 115.625 54.371 1.00 29.44 C
ATOM 14 N9 A A 148 74.606 115.442 54.067 1.00 31.02 N
ATOM 15 C8 A A 148 74.049 114.646 53.099 1.00 32.10 C
ATOM 16 N7 A A 148 72.745 114.725 53.037 1.00 32.55 N
ATOM 17 C5 A A 148 72.419 115.623 54.040 1.00 32.65 C
ATOM 18 C6 A A 148 71.194 116.145 54.473 1.00 34.36 C
ATOM 19 N6 A A 148 70.016 115.829 53.924 1.00 34.68 N
ATOM 20 N1 A A 148 71.218 117.024 55.498 1.00 35.81 N
ATOM 21 C2 A A 148 72.404 117.352 56.032 1.00 34.30 C
ATOM 22 N3 A A 148 73.619 116.935 55.702 1.00 30.00 N
ATOM 23 C4 A A 148 73.555 116.063 54.690 1.00 30.68 C
ATOM 24 P A A 149 77.542 111.723 56.927 1.00 33.52 P
ATOM 25 OP1 A A 149 78.811 111.274 57.561 1.00 31.13 O
ATOM 26 OP2 A A 149 76.859 110.840 55.948 1.00 32.43 O
ATOM 27 O5' A A 149 76.488 112.130 58.053 1.00 29.63 O
TER

ATOM 1 O3' C B 161 66.167 108.814 52.972 1.00 33.76 O
ATOM 2 P A B 162 66.364 109.715 51.668 1.00 34.78 P
ATOM 3 OP1 A B 162 67.291 110.813 52.005 1.00 35.71 O
ATOM 4 OP2 A B 162 65.011 110.025 51.134 1.00 35.49 O
ATOM 5 O5' A B 162 67.090 108.759 50.635 1.00 32.23 O
ATOM 6 C5' A B 162 67.191 109.139 49.268 1.00 32.59 C
ATOM 7 C4' A B 162 68.590 108.921 48.786 1.00 32.75 C
ATOM 8 O4' A B 162 69.477 109.799 49.537 1.00 33.49 O
ATOM 9 C3' A B 162 69.112 107.504 49.009 1.00 32.45 C
ATOM 10 O3' A B 162 70.042 107.215 47.971 1.00 32.86 O
ATOM 11 C2' A B 162 69.890 107.669 50.310 1.00 32.67 C
ATOM 12 O2' A B 162 70.868 106.674 50.509 1.00 34.04 O
ATOM 13 C1' A B 162 70.534 109.030 50.055 1.00 33.47 C
ATOM 14 N9 A B 162 71.135 109.705 51.205 1.00 32.03 N
ATOM 15 C8 A B 162 70.530 110.376 52.237 1.00 32.59 C
ATOM 16 N7 A B 162 71.363 110.774 53.168 1.00 31.23 N
ATOM 17 C5 A B 162 72.601 110.355 52.707 1.00 31.34 C
ATOM 18 C6 A B 162 73.891 110.450 53.250 1.00 31.62 C
ATOM 19 N6 A B 162 74.158 111.018 54.427 1.00 30.76 N
ATOM 20 N1 A B 162 74.913 109.930 52.534 1.00 32.08 N
ATOM 21 C2 A B 162 74.645 109.360 51.354 1.00 32.78 C
ATOM 22 N3 A B 162 73.473 109.209 50.740 1.00 32.82 N
ATOM 23 C4 A B 162 72.479 109.728 51.483 1.00 31.89 C
ATOM 24 P G B 163 69.609 106.323 46.709 1.00 34.94 P
ATOM 25 OP1 G B 163 68.310 106.840 46.187 1.00 32.56 O
ATOM 26 OP2 G B 163 69.739 104.896 47.079 1.00 33.01 O
ATOM 27 O5' G B 163 70.761 106.637 45.654 1.00 35.22 O
TER

Atoms:
OP1: (80.344,112.138,52.241)
OP2: (79.124,111.669,50.033)
C3': (76.934,113.669,55.302)
C1': (76.019,115.625,54.371)
C5': (77.657,112.739,53.061)
O4': (76.764,114.967,53.366)
C8: (74.049,114.646,53.099)
O2': (77.427,115.862,56.295)
C6: (71.194,116.145,54.473)
C5: (72.419,115.623,54.040)
C4: (73.555,116.063,54.690)
P: (79.456,112.592,51.143)
C4': (77.587,113.940,53.967)
C2': (76.436,115.043,55.719)
C2: (72.404,117.352,56.032)
N1: (71.218,117.024,55.498)
N3: (73.619,116.935,55.702)
N6: (70.016,115.829,53.924)
N7: (72.745,114.725,53.037)
N9: (74.606,115.442,54.067)
O5': (78.093,113.134,51.754)
O3': (77.873,113.112,56.200)
OP1: (67.291,110.813,52.005)
OP2: (65.011,110.025,51.134)
C3': (69.112,107.504,49.009)
C1': (70.534,109.030,50.055)
C5': (67.191,109.139,49.268)
O4': (69.477,109.799,49.537)
C8: (70.530,110.376,52.237)
O2': (70.868,106.674,50.509)
C6: (73.891,110.450,53.250)
C5: (72.601,110.355,52.707)
C4: (72.479,109.728,51.483)
P: (66.364,109.715,51.668)
C4': (68.590,108.921,48.786)
C2': (69.890,107.669,50.310)
C2: (74.645,109.360,51.354)
N1: (74.913,109.930,52.534)
N3: (73.473,109.209,50.740)
N6: (74.158,111.018,54.427)
N7: (71.363,110.774,53.168)
N9: (71.135,109.705,51.205)
O5': (67.090,108.759,50.635)
O3': (70.042,107.215,47.971)
Image (generated by PyMOL):
PyMOL image
show in jmol