Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:976:9102
Extra
PDB:
ATOM 1 O3' G A 75 44.955 61.571 128.350 1.00 69.59 O
ATOM 2 P A A 76 44.967 62.927 127.473 1.00 70.87 P
ATOM 3 OP1 A A 76 45.515 62.619 126.121 1.00 70.85 O
ATOM 4 OP2 A A 76 45.604 63.990 128.304 1.00 71.33 O
ATOM 5 O5' A A 76 43.440 63.336 127.314 1.00 66.47 O
ATOM 6 C5' A A 76 42.440 62.340 127.197 1.00 63.76 C
ATOM 7 C4' A A 76 41.572 62.614 126.007 1.00 61.77 C
ATOM 8 O4' A A 76 42.374 62.666 124.792 1.00 60.41 O
ATOM 9 C3' A A 76 40.544 61.521 125.776 1.00 61.97 C
ATOM 10 O3' A A 76 39.387 62.103 125.221 1.00 62.45 O
ATOM 11 C2' A A 76 41.222 60.638 124.739 1.00 61.23 C
ATOM 12 O2' A A 76 40.300 59.864 123.999 1.00 64.19 O
ATOM 13 C1' A A 76 41.899 61.696 123.874 1.00 59.35 C
ATOM 14 N9 A A 76 43.011 61.212 123.049 1.00 55.63 N
ATOM 15 C8 A A 76 44.360 61.350 123.261 1.00 54.31 C
ATOM 16 N7 A A 76 45.100 60.832 122.313 1.00 52.43 N
ATOM 17 C5 A A 76 44.178 60.311 121.419 1.00 52.27 C
ATOM 18 C6 A A 76 44.325 59.635 120.196 1.00 52.51 C
ATOM 19 N6 A A 76 45.508 59.368 119.636 1.00 52.55 N
ATOM 20 N1 A A 76 43.204 59.240 119.558 1.00 52.18 N
ATOM 21 C2 A A 76 42.023 59.514 120.116 1.00 51.82 C
ATOM 22 N3 A A 76 41.756 60.146 121.253 1.00 52.24 N
ATOM 23 C4 A A 76 42.890 60.525 121.864 1.00 52.77 C
ATOM 24 P G A 77 37.958 61.746 125.833 1.00 62.56 P
ATOM 25 OP1 G A 77 37.718 62.722 126.924 1.00 60.20 O
ATOM 26 OP2 G A 77 37.934 60.288 126.125 1.00 63.56 O
ATOM 27 O5' G A 77 36.967 62.035 124.621 1.00 62.34 O
TER
ATOM 1 O3' G B 101 41.852 60.727 113.567 1.00 45.21 O
ATOM 2 P A B 102 41.718 59.638 114.729 1.00 44.99 P
ATOM 3 OP1 A B 102 42.298 58.363 114.228 1.00 42.56 O
ATOM 4 OP2 A B 102 40.319 59.667 115.218 1.00 43.80 O
ATOM 5 O5' A B 102 42.640 60.229 115.878 1.00 43.55 O
ATOM 6 C5' A B 102 43.911 59.644 116.152 1.00 45.71 C
ATOM 7 C4' A B 102 44.977 60.290 115.306 1.00 45.76 C
ATOM 8 O4' A B 102 45.017 61.715 115.569 1.00 45.51 O
ATOM 9 C3' A B 102 46.367 59.802 115.640 1.00 46.52 C
ATOM 10 O3' A B 102 46.641 58.604 114.938 1.00 48.90 O
ATOM 11 C2' A B 102 47.238 60.975 115.226 1.00 46.07 C
ATOM 12 O2' A B 102 47.429 61.034 113.830 1.00 47.98 O
ATOM 13 C1' A B 102 46.359 62.154 115.642 1.00 45.07 C
ATOM 14 N9 A B 102 46.590 62.630 117.005 1.00 45.43 N
ATOM 15 C8 A B 102 45.663 62.695 118.013 1.00 45.79 C
ATOM 16 N7 A B 102 46.131 63.187 119.130 1.00 46.86 N
ATOM 17 C5 A B 102 47.458 63.459 118.844 1.00 46.84 C
ATOM 18 C6 A B 102 48.490 64.004 119.617 1.00 48.42 C
ATOM 19 N6 A B 102 48.333 64.396 120.887 1.00 49.78 N
ATOM 20 N1 A B 102 49.701 64.142 119.037 1.00 48.18 N
ATOM 21 C2 A B 102 49.846 63.766 117.763 1.00 47.94 C
ATOM 22 N3 A B 102 48.947 63.249 116.931 1.00 47.99 N
ATOM 23 C4 A B 102 47.758 63.117 117.541 1.00 46.29 C
ATOM 24 P A B 103 47.345 57.385 115.703 1.00 52.18 P
ATOM 25 OP1 A B 103 47.714 56.363 114.692 1.00 51.07 O
ATOM 26 OP2 A B 103 46.496 57.002 116.863 1.00 52.80 O
ATOM 27 O5' A B 103 48.686 58.033 116.253 1.00 51.12 O
TER
ATOM 2 P A A 76 44.967 62.927 127.473 1.00 70.87 P
ATOM 3 OP1 A A 76 45.515 62.619 126.121 1.00 70.85 O
ATOM 4 OP2 A A 76 45.604 63.990 128.304 1.00 71.33 O
ATOM 5 O5' A A 76 43.440 63.336 127.314 1.00 66.47 O
ATOM 6 C5' A A 76 42.440 62.340 127.197 1.00 63.76 C
ATOM 7 C4' A A 76 41.572 62.614 126.007 1.00 61.77 C
ATOM 8 O4' A A 76 42.374 62.666 124.792 1.00 60.41 O
ATOM 9 C3' A A 76 40.544 61.521 125.776 1.00 61.97 C
ATOM 10 O3' A A 76 39.387 62.103 125.221 1.00 62.45 O
ATOM 11 C2' A A 76 41.222 60.638 124.739 1.00 61.23 C
ATOM 12 O2' A A 76 40.300 59.864 123.999 1.00 64.19 O
ATOM 13 C1' A A 76 41.899 61.696 123.874 1.00 59.35 C
ATOM 14 N9 A A 76 43.011 61.212 123.049 1.00 55.63 N
ATOM 15 C8 A A 76 44.360 61.350 123.261 1.00 54.31 C
ATOM 16 N7 A A 76 45.100 60.832 122.313 1.00 52.43 N
ATOM 17 C5 A A 76 44.178 60.311 121.419 1.00 52.27 C
ATOM 18 C6 A A 76 44.325 59.635 120.196 1.00 52.51 C
ATOM 19 N6 A A 76 45.508 59.368 119.636 1.00 52.55 N
ATOM 20 N1 A A 76 43.204 59.240 119.558 1.00 52.18 N
ATOM 21 C2 A A 76 42.023 59.514 120.116 1.00 51.82 C
ATOM 22 N3 A A 76 41.756 60.146 121.253 1.00 52.24 N
ATOM 23 C4 A A 76 42.890 60.525 121.864 1.00 52.77 C
ATOM 24 P G A 77 37.958 61.746 125.833 1.00 62.56 P
ATOM 25 OP1 G A 77 37.718 62.722 126.924 1.00 60.20 O
ATOM 26 OP2 G A 77 37.934 60.288 126.125 1.00 63.56 O
ATOM 27 O5' G A 77 36.967 62.035 124.621 1.00 62.34 O
TER
ATOM 1 O3' G B 101 41.852 60.727 113.567 1.00 45.21 O
ATOM 2 P A B 102 41.718 59.638 114.729 1.00 44.99 P
ATOM 3 OP1 A B 102 42.298 58.363 114.228 1.00 42.56 O
ATOM 4 OP2 A B 102 40.319 59.667 115.218 1.00 43.80 O
ATOM 5 O5' A B 102 42.640 60.229 115.878 1.00 43.55 O
ATOM 6 C5' A B 102 43.911 59.644 116.152 1.00 45.71 C
ATOM 7 C4' A B 102 44.977 60.290 115.306 1.00 45.76 C
ATOM 8 O4' A B 102 45.017 61.715 115.569 1.00 45.51 O
ATOM 9 C3' A B 102 46.367 59.802 115.640 1.00 46.52 C
ATOM 10 O3' A B 102 46.641 58.604 114.938 1.00 48.90 O
ATOM 11 C2' A B 102 47.238 60.975 115.226 1.00 46.07 C
ATOM 12 O2' A B 102 47.429 61.034 113.830 1.00 47.98 O
ATOM 13 C1' A B 102 46.359 62.154 115.642 1.00 45.07 C
ATOM 14 N9 A B 102 46.590 62.630 117.005 1.00 45.43 N
ATOM 15 C8 A B 102 45.663 62.695 118.013 1.00 45.79 C
ATOM 16 N7 A B 102 46.131 63.187 119.130 1.00 46.86 N
ATOM 17 C5 A B 102 47.458 63.459 118.844 1.00 46.84 C
ATOM 18 C6 A B 102 48.490 64.004 119.617 1.00 48.42 C
ATOM 19 N6 A B 102 48.333 64.396 120.887 1.00 49.78 N
ATOM 20 N1 A B 102 49.701 64.142 119.037 1.00 48.18 N
ATOM 21 C2 A B 102 49.846 63.766 117.763 1.00 47.94 C
ATOM 22 N3 A B 102 48.947 63.249 116.931 1.00 47.99 N
ATOM 23 C4 A B 102 47.758 63.117 117.541 1.00 46.29 C
ATOM 24 P A B 103 47.345 57.385 115.703 1.00 52.18 P
ATOM 25 OP1 A B 103 47.714 56.363 114.692 1.00 51.07 O
ATOM 26 OP2 A B 103 46.496 57.002 116.863 1.00 52.80 O
ATOM 27 O5' A B 103 48.686 58.033 116.253 1.00 51.12 O
TER
Atoms:
OP1: (45.515,62.619,126.121)
OP2: (45.604,63.990,128.304)
C3': (40.544,61.521,125.776)
C1': (41.899,61.696,123.874)
C5': (42.440,62.340,127.197)
O4': (42.374,62.666,124.792)
C8: (44.360,61.350,123.261)
O2': (40.300,59.864,123.999)
C6: (44.325,59.635,120.196)
C5: (44.178,60.311,121.419)
C4: (42.890,60.525,121.864)
P: (44.967,62.927,127.473)
C4': (41.572,62.614,126.007)
C2': (41.222,60.638,124.739)
C2: (42.023,59.514,120.116)
N1: (43.204,59.240,119.558)
N3: (41.756,60.146,121.253)
N6: (45.508,59.368,119.636)
N7: (45.100,60.832,122.313)
N9: (43.011,61.212,123.049)
O5': (43.440,63.336,127.314)
O3': (39.387,62.103,125.221)
OP2: (45.604,63.990,128.304)
C3': (40.544,61.521,125.776)
C1': (41.899,61.696,123.874)
C5': (42.440,62.340,127.197)
O4': (42.374,62.666,124.792)
C8: (44.360,61.350,123.261)
O2': (40.300,59.864,123.999)
C6: (44.325,59.635,120.196)
C5: (44.178,60.311,121.419)
C4: (42.890,60.525,121.864)
P: (44.967,62.927,127.473)
C4': (41.572,62.614,126.007)
C2': (41.222,60.638,124.739)
C2: (42.023,59.514,120.116)
N1: (43.204,59.240,119.558)
N3: (41.756,60.146,121.253)
N6: (45.508,59.368,119.636)
N7: (45.100,60.832,122.313)
N9: (43.011,61.212,123.049)
O5': (43.440,63.336,127.314)
O3': (39.387,62.103,125.221)
OP1: (42.298,58.363,114.228)
OP2: (40.319,59.667,115.218)
C3': (46.367,59.802,115.640)
C1': (46.359,62.154,115.642)
C5': (43.911,59.644,116.152)
O4': (45.017,61.715,115.569)
C8: (45.663,62.695,118.013)
O2': (47.429,61.034,113.830)
C6: (48.490,64.004,119.617)
C5: (47.458,63.459,118.844)
C4: (47.758,63.117,117.541)
P: (41.718,59.638,114.729)
C4': (44.977,60.290,115.306)
C2': (47.238,60.975,115.226)
C2: (49.846,63.766,117.763)
N1: (49.701,64.142,119.037)
N3: (48.947,63.249,116.931)
N6: (48.333,64.396,120.887)
N7: (46.131,63.187,119.130)
N9: (46.590,62.630,117.005)
O5': (42.640,60.229,115.878)
O3': (46.641,58.604,114.938)
OP2: (40.319,59.667,115.218)
C3': (46.367,59.802,115.640)
C1': (46.359,62.154,115.642)
C5': (43.911,59.644,116.152)
O4': (45.017,61.715,115.569)
C8: (45.663,62.695,118.013)
O2': (47.429,61.034,113.830)
C6: (48.490,64.004,119.617)
C5: (47.458,63.459,118.844)
C4: (47.758,63.117,117.541)
P: (41.718,59.638,114.729)
C4': (44.977,60.290,115.306)
C2': (47.238,60.975,115.226)
C2: (49.846,63.766,117.763)
N1: (49.701,64.142,119.037)
N3: (48.947,63.249,116.931)
N6: (48.333,64.396,120.887)
N7: (46.131,63.187,119.130)
N9: (46.590,62.630,117.005)
O5': (42.640,60.229,115.878)
O3': (46.641,58.604,114.938)
Image (generated by PyMOL):