ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QRU:B35:B34

Extra

PDB:
ATOM 1 O3' A A 34 24.799 -1.228 20.689 1.00 39.21 O
ATOM 2 P U A 35 23.448 -0.363 20.708 1.00 39.68 P
ATOM 3 OP1 U A 35 23.790 1.068 20.918 1.00 38.65 O
ATOM 4 OP2 U A 35 22.517 -1.031 21.640 1.00 37.32 O
ATOM 5 O5' U A 35 22.878 -0.529 19.237 1.00 36.89 O
ATOM 6 C5' U A 35 23.676 -0.150 18.119 1.00 38.72 C
ATOM 7 C4' U A 35 22.987 -0.511 16.836 1.00 37.69 C
ATOM 8 O4' U A 35 22.903 -1.949 16.711 1.00 39.05 O
ATOM 9 C3' U A 35 21.550 -0.034 16.727 1.00 37.78 C
ATOM 10 O3' U A 35 21.507 1.303 16.258 1.00 40.44 O
ATOM 11 C2' U A 35 20.961 -0.993 15.706 1.00 39.16 C
ATOM 12 O2' U A 35 21.211 -0.570 14.385 1.00 35.91 O
ATOM 13 C1' U A 35 21.708 -2.297 16.029 1.00 39.11 C
ATOM 14 N1 U A 35 20.928 -3.171 16.909 1.00 37.94 N
ATOM 15 C2 U A 35 19.830 -3.818 16.364 1.00 36.95 C
ATOM 16 O2 U A 35 19.564 -3.799 15.165 1.00 37.65 O
ATOM 17 N3 U A 35 19.062 -4.494 17.268 1.00 38.60 N
ATOM 18 C4 U A 35 19.284 -4.610 18.630 1.00 37.90 C
ATOM 19 O4 U A 35 18.369 -5.012 19.348 1.00 36.98 O
ATOM 20 C5 U A 35 20.491 -3.989 19.092 1.00 37.70 C
ATOM 21 C6 U A 35 21.248 -3.307 18.239 1.00 39.80 C
ATOM 22 P U A 36 20.449 2.316 16.894 1.00 45.78 P
ATOM 23 OP1 U A 36 20.563 3.628 16.207 1.00 45.31 O
ATOM 24 OP2 U A 36 20.612 2.234 18.368 1.00 45.47 O
ATOM 25 O5' U A 36 19.056 1.677 16.494 1.00 49.18 O
TER

ATOM 1 O3' G B 33 24.602 -5.414 24.782 1.00 44.76 O
ATOM 2 P A B 34 23.313 -4.939 23.933 1.00 41.53 P
ATOM 3 OP1 A B 34 22.705 -3.749 24.601 1.00 40.68 O
ATOM 4 OP2 A B 34 22.442 -6.099 23.626 1.00 43.10 O
ATOM 5 O5' A B 34 23.985 -4.423 22.584 1.00 41.83 O
ATOM 6 C5' A B 34 25.255 -3.779 22.608 1.00 41.65 C
ATOM 7 C4' A B 34 25.697 -3.449 21.212 1.00 41.63 C
ATOM 8 O4' A B 34 25.786 -4.691 20.460 1.00 40.09 O
ATOM 9 C3' A B 34 24.719 -2.616 20.400 1.00 41.11 C
ATOM 10 O3' A B 34 24.799 -1.228 20.689 1.00 39.21 O
ATOM 11 C2' A B 34 25.144 -2.943 18.978 1.00 41.33 C
ATOM 12 O2' A B 34 26.307 -2.239 18.578 1.00 43.63 O
ATOM 13 C1' A B 34 25.435 -4.446 19.103 1.00 42.47 C
ATOM 14 N9 A B 34 24.264 -5.263 18.766 1.00 41.76 N
ATOM 15 C8 A B 34 23.499 -6.051 19.585 1.00 41.49 C
ATOM 16 N7 A B 34 22.457 -6.579 18.990 1.00 43.17 N
ATOM 17 C5 A B 34 22.555 -6.122 17.683 1.00 43.38 C
ATOM 18 C6 A B 34 21.737 -6.309 16.542 1.00 41.11 C
ATOM 19 N6 A B 34 20.600 -7.006 16.542 1.00 40.54 N
ATOM 20 N1 A B 34 22.132 -5.732 15.385 1.00 40.87 N
ATOM 21 C2 A B 34 23.262 -5.012 15.383 1.00 42.02 C
ATOM 22 N3 A B 34 24.102 -4.753 16.387 1.00 43.32 N
ATOM 23 C4 A B 34 23.683 -5.339 17.521 1.00 42.76 C
ATOM 24 P U B 35 23.448 -0.363 20.708 1.00 39.68 P
ATOM 25 OP1 U B 35 23.790 1.068 20.918 1.00 38.65 O
ATOM 26 OP2 U B 35 22.517 -1.031 21.640 1.00 37.32 O
ATOM 27 O5' U B 35 22.878 -0.529 19.237 1.00 36.89 O
TER

Atoms:
C4: (19.284,-4.610,18.630)
N3: (19.062,-4.494,17.268)
OP1: (23.790,1.068,20.918)
OP2: (22.517,-1.031,21.640)
C2: (19.830,-3.818,16.364)
C1': (21.708,-2.297,16.029)
C3': (21.550,-0.034,16.727)
O5': (22.878,-0.529,19.237)
O4': (22.903,-1.949,16.711)
C5': (23.676,-0.150,18.119)
P: (23.448,-0.363,20.708)
C4': (22.987,-0.511,16.836)
C2': (20.961,-0.993,15.706)
O2': (21.211,-0.570,14.385)
N1: (20.928,-3.171,16.909)
O4: (18.369,-5.012,19.348)
O2: (19.564,-3.799,15.165)
C6: (21.248,-3.307,18.239)
C5: (20.491,-3.989,19.092)
O3': (21.507,1.303,16.258)
OP1: (22.705,-3.749,24.601)
OP2: (22.442,-6.099,23.626)
C3': (24.719,-2.616,20.400)
C1': (25.435,-4.446,19.103)
C5': (25.255,-3.779,22.608)
O4': (25.786,-4.691,20.460)
C8: (23.499,-6.051,19.585)
O2': (26.307,-2.239,18.578)
C6: (21.737,-6.309,16.542)
C5: (22.555,-6.122,17.683)
C4: (23.683,-5.339,17.521)
P: (23.313,-4.939,23.933)
C4': (25.697,-3.449,21.212)
C2': (25.144,-2.943,18.978)
C2: (23.262,-5.012,15.383)
N1: (22.132,-5.732,15.385)
N3: (24.102,-4.753,16.387)
N6: (20.600,-7.006,16.542)
N7: (22.457,-6.579,18.990)
N9: (24.264,-5.263,18.766)
O5': (23.985,-4.423,22.584)
O3': (24.799,-1.228,20.689)
Image (generated by PyMOL):
PyMOL image
show in jmol