ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:B76:B102

Extra

PDB:
ATOM 1 O3' G A 75 45.194 61.711 128.888 1.00 59.43 O
ATOM 2 P A A 76 45.190 63.041 127.974 1.00 61.88 P
ATOM 3 OP1 A A 76 45.756 62.626 126.667 1.00 60.94 O
ATOM 4 OP2 A A 76 45.830 64.137 128.742 1.00 64.14 O
ATOM 5 O5' A A 76 43.664 63.452 127.783 1.00 61.10 O
ATOM 6 C5' A A 76 42.660 62.460 127.692 1.00 60.50 C
ATOM 7 C4' A A 76 41.764 62.722 126.513 1.00 59.13 C
ATOM 8 O4' A A 76 42.541 62.794 125.283 1.00 58.45 O
ATOM 9 C3' A A 76 40.777 61.590 126.309 1.00 59.69 C
ATOM 10 O3' A A 76 39.587 62.106 125.759 1.00 61.59 O
ATOM 11 C2' A A 76 41.479 60.720 125.283 1.00 59.56 C
ATOM 12 O2' A A 76 40.547 59.892 124.621 1.00 59.82 O
ATOM 13 C1' A A 76 42.099 61.792 124.383 1.00 58.81 C
ATOM 14 N9 A A 76 43.226 61.354 123.534 1.00 57.81 N
ATOM 15 C8 A A 76 44.581 61.440 123.763 1.00 56.99 C
ATOM 16 N7 A A 76 45.315 60.912 122.811 1.00 56.68 N
ATOM 17 C5 A A 76 44.386 60.449 121.891 1.00 56.68 C
ATOM 18 C6 A A 76 44.515 59.764 120.653 1.00 57.44 C
ATOM 19 N6 A A 76 45.681 59.370 120.130 1.00 57.91 N
ATOM 20 N1 A A 76 43.377 59.481 119.971 1.00 57.08 N
ATOM 21 C2 A A 76 42.206 59.841 120.510 1.00 56.51 C
ATOM 22 N3 A A 76 41.961 60.455 121.659 1.00 56.05 N
ATOM 23 C4 A A 76 43.100 60.734 122.311 1.00 56.39 C
ATOM 24 P G A 77 38.178 61.772 126.452 1.00 63.37 P
ATOM 25 OP1 G A 77 37.962 62.768 127.530 1.00 61.71 O
ATOM 26 OP2 G A 77 38.144 60.314 126.768 1.00 63.21 O
ATOM 27 O5' G A 77 37.131 62.138 125.310 1.00 61.68 O
TER

ATOM 1 O3' G B 101 41.742 60.670 114.056 1.00 46.64 O
ATOM 2 P A B 102 41.877 59.704 115.330 1.00 45.73 P
ATOM 3 OP1 A B 102 41.806 58.307 114.826 1.00 47.00 O
ATOM 4 OP2 A B 102 40.927 60.156 116.353 1.00 45.10 O
ATOM 5 O5' A B 102 43.383 59.974 115.750 1.00 45.05 O
ATOM 6 C5' A B 102 44.333 60.021 114.694 1.00 47.92 C
ATOM 7 C4' A B 102 45.640 60.626 115.107 1.00 47.07 C
ATOM 8 O4' A B 102 45.563 61.904 115.771 1.00 45.95 O
ATOM 9 C3' A B 102 46.514 59.877 116.063 1.00 47.87 C
ATOM 10 O3' A B 102 46.898 58.645 115.473 1.00 47.98 O
ATOM 11 C2' A B 102 47.658 60.885 116.156 1.00 47.58 C
ATOM 12 O2' A B 102 48.442 60.890 114.979 1.00 48.13 O
ATOM 13 C1' A B 102 46.882 62.217 116.195 1.00 45.85 C
ATOM 14 N9 A B 102 46.871 62.805 117.539 1.00 44.44 N
ATOM 15 C8 A B 102 45.878 62.867 118.477 1.00 44.12 C
ATOM 16 N7 A B 102 46.266 63.384 119.615 1.00 43.99 N
ATOM 17 C5 A B 102 47.600 63.701 119.407 1.00 44.02 C
ATOM 18 C6 A B 102 48.593 64.260 120.244 1.00 44.23 C
ATOM 19 N6 A B 102 48.402 64.580 121.527 1.00 45.16 N
ATOM 20 N1 A B 102 49.811 64.465 119.711 1.00 45.51 N
ATOM 21 C2 A B 102 50.017 64.117 118.435 1.00 44.82 C
ATOM 22 N3 A B 102 49.178 63.569 117.566 1.00 44.33 N
ATOM 23 C4 A B 102 47.974 63.380 118.124 1.00 43.95 C
ATOM 24 P A B 103 47.528 57.494 116.386 1.00 49.01 P
ATOM 25 OP1 A B 103 47.852 56.406 115.444 1.00 48.86 O
ATOM 26 OP2 A B 103 46.640 57.220 117.555 1.00 48.54 O
ATOM 27 O5' A B 103 48.899 58.133 116.894 1.00 49.14 O
TER

Atoms:
OP1: (45.756,62.626,126.667)
OP2: (45.830,64.137,128.742)
C3': (40.777,61.590,126.309)
C1': (42.099,61.792,124.383)
C5': (42.660,62.460,127.692)
O4': (42.541,62.794,125.283)
C8: (44.581,61.440,123.763)
O2': (40.547,59.892,124.621)
C6: (44.515,59.764,120.653)
C5: (44.386,60.449,121.891)
C4: (43.100,60.734,122.311)
P: (45.190,63.041,127.974)
C4': (41.764,62.722,126.513)
C2': (41.479,60.720,125.283)
C2: (42.206,59.841,120.510)
N1: (43.377,59.481,119.971)
N3: (41.961,60.455,121.659)
N6: (45.681,59.370,120.130)
N7: (45.315,60.912,122.811)
N9: (43.226,61.354,123.534)
O5': (43.664,63.452,127.783)
O3': (39.587,62.106,125.759)
OP1: (41.806,58.307,114.826)
OP2: (40.927,60.156,116.353)
C3': (46.514,59.877,116.063)
C1': (46.882,62.217,116.195)
C5': (44.333,60.021,114.694)
O4': (45.563,61.904,115.771)
C8: (45.878,62.867,118.477)
O2': (48.442,60.890,114.979)
C6: (48.593,64.260,120.244)
C5: (47.600,63.701,119.407)
C4: (47.974,63.380,118.124)
P: (41.877,59.704,115.330)
C4': (45.640,60.626,115.107)
C2': (47.658,60.885,116.156)
C2: (50.017,64.117,118.435)
N1: (49.811,64.465,119.711)
N3: (49.178,63.569,117.566)
N6: (48.402,64.580,121.527)
N7: (46.266,63.384,119.615)
N9: (46.871,62.805,117.539)
O5': (43.383,59.974,115.750)
O3': (46.898,58.645,115.473)
Image (generated by PyMOL):
PyMOL image
show in jmol