Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11008:11040
Extra
PDB:
ATOM 1 O3' G A1007 66.084 -59.907 35.341 1.00 70.08 O
ATOM 2 P A A1008 66.941 -59.452 36.616 1.00 98.95 P
ATOM 3 OP1 A A1008 66.041 -58.676 37.506 1.00 98.43 O
ATOM 4 OP2 A A1008 68.179 -58.811 36.100 1.00 98.96 O
ATOM 5 O5' A A1008 67.297 -60.831 37.285 1.00 99.34 O
ATOM 6 C5' A A1008 68.201 -61.715 36.654 1.00 99.86 C
ATOM 7 C4' A A1008 69.340 -62.058 37.557 1.00 99.96 C
ATOM 8 O4' A A1008 70.097 -63.111 36.936 1.00100.53 O
ATOM 9 C3' A A1008 70.299 -60.910 37.823 1.00 99.62 C
ATOM 10 O3' A A1008 70.678 -60.799 39.226 1.00 99.40 O
ATOM 11 C2' A A1008 71.506 -61.204 36.922 1.00100.04 C
ATOM 12 O2' A A1008 72.752 -60.828 37.465 1.00 99.98 O
ATOM 13 C1' A A1008 71.426 -62.713 36.694 1.00100.60 C
ATOM 14 N9 A A1008 71.739 -63.117 35.327 1.00101.04 N
ATOM 15 C8 A A1008 71.166 -62.653 34.169 1.00101.02 C
ATOM 16 N7 A A1008 71.631 -63.238 33.091 1.00101.50 N
ATOM 17 C5 A A1008 72.552 -64.160 33.580 1.00101.86 C
ATOM 18 C6 A A1008 73.408 -65.095 32.950 1.00102.45 C
ATOM 19 N6 A A1008 73.461 -65.279 31.627 1.00102.80 N
ATOM 20 N1 A A1008 74.215 -65.858 33.741 1.00102.70 N
ATOM 21 C2 A A1008 74.154 -65.683 35.077 1.00102.37 C
ATOM 22 N3 A A1008 73.399 -64.831 35.789 1.00101.81 N
ATOM 23 C4 A A1008 72.617 -64.098 34.965 1.00101.58 C
ATOM 24 P A A1009 70.572 -62.015 40.298 1.00 83.65 P
ATOM 25 OP1 A A1009 71.002 -61.461 41.602 1.00 83.32 O
ATOM 26 OP2 A A1009 71.330 -63.170 39.744 1.00 84.25 O
ATOM 27 O5' A A1009 69.024 -62.361 40.365 1.00 83.57 O
TER
ATOM 1 O3' U B1039 73.882 -58.243 23.328 1.00182.25 O
ATOM 2 P U B1040 74.365 -59.192 24.538 1.00146.97 P
ATOM 3 OP1 U B1040 75.589 -58.591 25.110 1.00146.79 O
ATOM 4 OP2 U B1040 74.450 -60.572 23.995 1.00147.60 O
ATOM 5 O5' U B1040 73.155 -59.079 25.596 1.00146.51 O
ATOM 6 C5' U B1040 72.503 -57.823 25.855 1.00145.94 C
ATOM 7 C4' U B1040 71.802 -57.776 27.211 1.00145.51 C
ATOM 8 O4' U B1040 71.518 -59.128 27.670 1.00145.82 O
ATOM 9 C3' U B1040 72.588 -57.097 28.344 1.00145.12 C
ATOM 10 O3' U B1040 71.682 -56.429 29.239 1.00144.59 O
ATOM 11 C2' U B1040 73.205 -58.292 29.063 1.00145.43 C
ATOM 12 O2' U B1040 73.565 -58.049 30.403 1.00145.10 O
ATOM 13 C1' U B1040 72.073 -59.307 28.961 1.00145.65 C
ATOM 14 N1 U B1040 72.499 -60.715 29.097 1.00146.16 N
ATOM 15 C2 U B1040 72.718 -61.252 30.361 1.00146.10 C
ATOM 16 O2 U B1040 72.601 -60.608 31.394 1.00145.64 O
ATOM 17 N3 U B1040 73.100 -62.578 30.358 1.00146.62 N
ATOM 18 C4 U B1040 73.265 -63.400 29.251 1.00147.19 C
ATOM 19 O4 U B1040 73.604 -64.576 29.385 1.00147.64 O
ATOM 20 C5 U B1040 73.010 -62.776 27.995 1.00147.22 C
ATOM 21 C6 U B1040 72.640 -61.491 27.971 1.00146.71 C
ATOM 22 P G B1041 71.094 -54.958 28.905 1.00 83.99 P
ATOM 23 OP1 G B1041 72.208 -54.127 28.390 1.00 83.99 O
ATOM 24 OP2 G B1041 70.365 -54.500 30.110 1.00 83.50 O
ATOM 25 O5' G B1041 70.063 -55.247 27.743 1.00 84.23 O
TER
ATOM 2 P A A1008 66.941 -59.452 36.616 1.00 98.95 P
ATOM 3 OP1 A A1008 66.041 -58.676 37.506 1.00 98.43 O
ATOM 4 OP2 A A1008 68.179 -58.811 36.100 1.00 98.96 O
ATOM 5 O5' A A1008 67.297 -60.831 37.285 1.00 99.34 O
ATOM 6 C5' A A1008 68.201 -61.715 36.654 1.00 99.86 C
ATOM 7 C4' A A1008 69.340 -62.058 37.557 1.00 99.96 C
ATOM 8 O4' A A1008 70.097 -63.111 36.936 1.00100.53 O
ATOM 9 C3' A A1008 70.299 -60.910 37.823 1.00 99.62 C
ATOM 10 O3' A A1008 70.678 -60.799 39.226 1.00 99.40 O
ATOM 11 C2' A A1008 71.506 -61.204 36.922 1.00100.04 C
ATOM 12 O2' A A1008 72.752 -60.828 37.465 1.00 99.98 O
ATOM 13 C1' A A1008 71.426 -62.713 36.694 1.00100.60 C
ATOM 14 N9 A A1008 71.739 -63.117 35.327 1.00101.04 N
ATOM 15 C8 A A1008 71.166 -62.653 34.169 1.00101.02 C
ATOM 16 N7 A A1008 71.631 -63.238 33.091 1.00101.50 N
ATOM 17 C5 A A1008 72.552 -64.160 33.580 1.00101.86 C
ATOM 18 C6 A A1008 73.408 -65.095 32.950 1.00102.45 C
ATOM 19 N6 A A1008 73.461 -65.279 31.627 1.00102.80 N
ATOM 20 N1 A A1008 74.215 -65.858 33.741 1.00102.70 N
ATOM 21 C2 A A1008 74.154 -65.683 35.077 1.00102.37 C
ATOM 22 N3 A A1008 73.399 -64.831 35.789 1.00101.81 N
ATOM 23 C4 A A1008 72.617 -64.098 34.965 1.00101.58 C
ATOM 24 P A A1009 70.572 -62.015 40.298 1.00 83.65 P
ATOM 25 OP1 A A1009 71.002 -61.461 41.602 1.00 83.32 O
ATOM 26 OP2 A A1009 71.330 -63.170 39.744 1.00 84.25 O
ATOM 27 O5' A A1009 69.024 -62.361 40.365 1.00 83.57 O
TER
ATOM 1 O3' U B1039 73.882 -58.243 23.328 1.00182.25 O
ATOM 2 P U B1040 74.365 -59.192 24.538 1.00146.97 P
ATOM 3 OP1 U B1040 75.589 -58.591 25.110 1.00146.79 O
ATOM 4 OP2 U B1040 74.450 -60.572 23.995 1.00147.60 O
ATOM 5 O5' U B1040 73.155 -59.079 25.596 1.00146.51 O
ATOM 6 C5' U B1040 72.503 -57.823 25.855 1.00145.94 C
ATOM 7 C4' U B1040 71.802 -57.776 27.211 1.00145.51 C
ATOM 8 O4' U B1040 71.518 -59.128 27.670 1.00145.82 O
ATOM 9 C3' U B1040 72.588 -57.097 28.344 1.00145.12 C
ATOM 10 O3' U B1040 71.682 -56.429 29.239 1.00144.59 O
ATOM 11 C2' U B1040 73.205 -58.292 29.063 1.00145.43 C
ATOM 12 O2' U B1040 73.565 -58.049 30.403 1.00145.10 O
ATOM 13 C1' U B1040 72.073 -59.307 28.961 1.00145.65 C
ATOM 14 N1 U B1040 72.499 -60.715 29.097 1.00146.16 N
ATOM 15 C2 U B1040 72.718 -61.252 30.361 1.00146.10 C
ATOM 16 O2 U B1040 72.601 -60.608 31.394 1.00145.64 O
ATOM 17 N3 U B1040 73.100 -62.578 30.358 1.00146.62 N
ATOM 18 C4 U B1040 73.265 -63.400 29.251 1.00147.19 C
ATOM 19 O4 U B1040 73.604 -64.576 29.385 1.00147.64 O
ATOM 20 C5 U B1040 73.010 -62.776 27.995 1.00147.22 C
ATOM 21 C6 U B1040 72.640 -61.491 27.971 1.00146.71 C
ATOM 22 P G B1041 71.094 -54.958 28.905 1.00 83.99 P
ATOM 23 OP1 G B1041 72.208 -54.127 28.390 1.00 83.99 O
ATOM 24 OP2 G B1041 70.365 -54.500 30.110 1.00 83.50 O
ATOM 25 O5' G B1041 70.063 -55.247 27.743 1.00 84.23 O
TER
Atoms:
OP1: (66.041,-58.676,37.506)
OP2: (68.179,-58.811,36.100)
C3': (70.299,-60.910,37.823)
C1': (71.426,-62.713,36.694)
C5': (68.201,-61.715,36.654)
O4': (70.097,-63.111,36.936)
C8: (71.166,-62.653,34.169)
O2': (72.752,-60.828,37.465)
C6: (73.408,-65.095,32.950)
C5: (72.552,-64.160,33.580)
C4: (72.617,-64.098,34.965)
P: (66.941,-59.452,36.616)
C4': (69.340,-62.058,37.557)
C2': (71.506,-61.204,36.922)
C2: (74.154,-65.683,35.077)
N1: (74.215,-65.858,33.741)
N3: (73.399,-64.831,35.789)
N6: (73.461,-65.279,31.627)
N7: (71.631,-63.238,33.091)
N9: (71.739,-63.117,35.327)
O5': (67.297,-60.831,37.285)
O3': (70.678,-60.799,39.226)
OP2: (68.179,-58.811,36.100)
C3': (70.299,-60.910,37.823)
C1': (71.426,-62.713,36.694)
C5': (68.201,-61.715,36.654)
O4': (70.097,-63.111,36.936)
C8: (71.166,-62.653,34.169)
O2': (72.752,-60.828,37.465)
C6: (73.408,-65.095,32.950)
C5: (72.552,-64.160,33.580)
C4: (72.617,-64.098,34.965)
P: (66.941,-59.452,36.616)
C4': (69.340,-62.058,37.557)
C2': (71.506,-61.204,36.922)
C2: (74.154,-65.683,35.077)
N1: (74.215,-65.858,33.741)
N3: (73.399,-64.831,35.789)
N6: (73.461,-65.279,31.627)
N7: (71.631,-63.238,33.091)
N9: (71.739,-63.117,35.327)
O5': (67.297,-60.831,37.285)
O3': (70.678,-60.799,39.226)
C4: (73.265,-63.400,29.251)
N3: (73.100,-62.578,30.358)
OP1: (75.589,-58.591,25.110)
OP2: (74.450,-60.572,23.995)
C2: (72.718,-61.252,30.361)
C1': (72.073,-59.307,28.961)
C3': (72.588,-57.097,28.344)
O5': (73.155,-59.079,25.596)
O4': (71.518,-59.128,27.670)
C5': (72.503,-57.823,25.855)
P: (74.365,-59.192,24.538)
C4': (71.802,-57.776,27.211)
C2': (73.205,-58.292,29.063)
O2': (73.565,-58.049,30.403)
N1: (72.499,-60.715,29.097)
O4: (73.604,-64.576,29.385)
O2: (72.601,-60.608,31.394)
C6: (72.640,-61.491,27.971)
C5: (73.010,-62.776,27.995)
O3': (71.682,-56.429,29.239)
N3: (73.100,-62.578,30.358)
OP1: (75.589,-58.591,25.110)
OP2: (74.450,-60.572,23.995)
C2: (72.718,-61.252,30.361)
C1': (72.073,-59.307,28.961)
C3': (72.588,-57.097,28.344)
O5': (73.155,-59.079,25.596)
O4': (71.518,-59.128,27.670)
C5': (72.503,-57.823,25.855)
P: (74.365,-59.192,24.538)
C4': (71.802,-57.776,27.211)
C2': (73.205,-58.292,29.063)
O2': (73.565,-58.049,30.403)
N1: (72.499,-60.715,29.097)
O4: (73.604,-64.576,29.385)
O2: (72.601,-60.608,31.394)
C6: (72.640,-61.491,27.971)
C5: (73.010,-62.776,27.995)
O3': (71.682,-56.429,29.239)
Image (generated by PyMOL):