Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12440:12441
Extra
PDB:
ATOM 1 O3' G A2439 10.269 -63.361 25.059 1.00 62.21 O
ATOM 2 P U A2440 11.601 -64.043 25.645 1.00 53.47 P
ATOM 3 OP1 U A2440 12.330 -64.681 24.513 1.00 53.92 O
ATOM 4 OP2 U A2440 11.192 -64.895 26.794 1.00 53.50 O
ATOM 5 O5' U A2440 12.408 -62.779 26.155 1.00 52.77 O
ATOM 6 C5' U A2440 12.036 -62.093 27.342 1.00 52.25 C
ATOM 7 C4' U A2440 13.118 -61.154 27.798 1.00 51.65 C
ATOM 8 O4' U A2440 14.270 -61.926 28.167 1.00 51.64 O
ATOM 9 C3' U A2440 13.618 -60.191 26.738 1.00 51.56 C
ATOM 10 O3' U A2440 14.263 -59.111 27.386 1.00 50.94 O
ATOM 11 C2' U A2440 14.662 -61.018 26.024 1.00 51.89 C
ATOM 12 O2' U A2440 15.575 -60.268 25.261 1.00 51.74 O
ATOM 13 C1' U A2440 15.315 -61.725 27.211 1.00 51.70 C
ATOM 14 N1 U A2440 15.852 -63.048 26.894 1.00 52.17 N
ATOM 15 C2 U A2440 17.038 -63.218 26.248 1.00 52.26 C
ATOM 16 O2 U A2440 17.728 -62.312 25.846 1.00 51.97 O
ATOM 17 N3 U A2440 17.345 -64.538 26.071 1.00 52.73 N
ATOM 18 C4 U A2440 16.605 -65.644 26.477 1.00 53.10 C
ATOM 19 O4 U A2440 17.000 -66.780 26.238 1.00 53.54 O
ATOM 20 C5 U A2440 15.406 -65.356 27.164 1.00 52.96 C
ATOM 21 C6 U A2440 15.087 -64.096 27.332 1.00 52.51 C
ATOM 22 P A A2441 13.565 -57.681 27.452 1.00 57.61 P
ATOM 23 OP1 A A2441 12.546 -57.623 26.341 1.00 58.05 O
ATOM 24 OP2 A A2441 14.670 -56.707 27.466 1.00 57.15 O
ATOM 25 O5' A A2441 12.833 -57.709 28.852 1.00 57.34 O
TER
ATOM 1 O3' U B2440 14.263 -59.111 27.386 1.00 50.94 O
ATOM 2 P A B2441 13.565 -57.681 27.452 1.00 57.61 P
ATOM 3 OP1 A B2441 12.546 -57.623 26.341 1.00 58.05 O
ATOM 4 OP2 A B2441 14.670 -56.707 27.466 1.00 57.15 O
ATOM 5 O5' A B2441 12.833 -57.709 28.852 1.00 57.34 O
ATOM 6 C5' A B2441 13.590 -57.802 30.027 1.00 56.94 C
ATOM 7 C4' A B2441 12.828 -58.475 31.114 1.00 56.98 C
ATOM 8 O4' A B2441 12.534 -59.839 30.716 1.00 57.56 O
ATOM 9 C3' A B2441 13.557 -58.555 32.463 1.00 56.56 C
ATOM 10 O3' A B2441 12.733 -58.037 33.495 1.00 56.27 O
ATOM 11 C2' A B2441 13.757 -60.041 32.695 1.00 56.95 C
ATOM 12 O2' A B2441 13.639 -60.416 34.040 1.00 56.76 O
ATOM 13 C1' A B2441 12.647 -60.659 31.851 1.00 57.52 C
ATOM 14 N9 A B2441 12.899 -62.044 31.437 1.00 58.05 N
ATOM 15 C8 A B2441 11.969 -63.046 31.270 1.00 58.56 C
ATOM 16 N7 A B2441 12.452 -64.208 30.938 1.00 58.98 N
ATOM 17 C5 A B2441 13.819 -63.948 30.904 1.00 58.71 C
ATOM 18 C6 A B2441 14.938 -64.761 30.629 1.00 58.91 C
ATOM 19 N6 A B2441 14.865 -66.051 30.296 1.00 59.47 N
ATOM 20 N1 A B2441 16.170 -64.214 30.668 1.00 58.55 N
ATOM 21 C2 A B2441 16.262 -62.925 30.977 1.00 58.01 C
ATOM 22 N3 A B2441 15.299 -62.065 31.271 1.00 57.77 N
ATOM 23 C4 A B2441 14.099 -62.636 31.221 1.00 58.14 C
ATOM 24 P G B2442 12.742 -56.457 33.807 1.00 54.41 P
ATOM 25 OP1 G B2442 14.173 -55.982 33.691 1.00 54.10 O
ATOM 26 OP2 G B2442 12.004 -56.254 35.102 1.00 54.16 O
ATOM 27 O5' G B2442 11.881 -55.886 32.607 1.00 54.66 O
TER
ATOM 2 P U A2440 11.601 -64.043 25.645 1.00 53.47 P
ATOM 3 OP1 U A2440 12.330 -64.681 24.513 1.00 53.92 O
ATOM 4 OP2 U A2440 11.192 -64.895 26.794 1.00 53.50 O
ATOM 5 O5' U A2440 12.408 -62.779 26.155 1.00 52.77 O
ATOM 6 C5' U A2440 12.036 -62.093 27.342 1.00 52.25 C
ATOM 7 C4' U A2440 13.118 -61.154 27.798 1.00 51.65 C
ATOM 8 O4' U A2440 14.270 -61.926 28.167 1.00 51.64 O
ATOM 9 C3' U A2440 13.618 -60.191 26.738 1.00 51.56 C
ATOM 10 O3' U A2440 14.263 -59.111 27.386 1.00 50.94 O
ATOM 11 C2' U A2440 14.662 -61.018 26.024 1.00 51.89 C
ATOM 12 O2' U A2440 15.575 -60.268 25.261 1.00 51.74 O
ATOM 13 C1' U A2440 15.315 -61.725 27.211 1.00 51.70 C
ATOM 14 N1 U A2440 15.852 -63.048 26.894 1.00 52.17 N
ATOM 15 C2 U A2440 17.038 -63.218 26.248 1.00 52.26 C
ATOM 16 O2 U A2440 17.728 -62.312 25.846 1.00 51.97 O
ATOM 17 N3 U A2440 17.345 -64.538 26.071 1.00 52.73 N
ATOM 18 C4 U A2440 16.605 -65.644 26.477 1.00 53.10 C
ATOM 19 O4 U A2440 17.000 -66.780 26.238 1.00 53.54 O
ATOM 20 C5 U A2440 15.406 -65.356 27.164 1.00 52.96 C
ATOM 21 C6 U A2440 15.087 -64.096 27.332 1.00 52.51 C
ATOM 22 P A A2441 13.565 -57.681 27.452 1.00 57.61 P
ATOM 23 OP1 A A2441 12.546 -57.623 26.341 1.00 58.05 O
ATOM 24 OP2 A A2441 14.670 -56.707 27.466 1.00 57.15 O
ATOM 25 O5' A A2441 12.833 -57.709 28.852 1.00 57.34 O
TER
ATOM 1 O3' U B2440 14.263 -59.111 27.386 1.00 50.94 O
ATOM 2 P A B2441 13.565 -57.681 27.452 1.00 57.61 P
ATOM 3 OP1 A B2441 12.546 -57.623 26.341 1.00 58.05 O
ATOM 4 OP2 A B2441 14.670 -56.707 27.466 1.00 57.15 O
ATOM 5 O5' A B2441 12.833 -57.709 28.852 1.00 57.34 O
ATOM 6 C5' A B2441 13.590 -57.802 30.027 1.00 56.94 C
ATOM 7 C4' A B2441 12.828 -58.475 31.114 1.00 56.98 C
ATOM 8 O4' A B2441 12.534 -59.839 30.716 1.00 57.56 O
ATOM 9 C3' A B2441 13.557 -58.555 32.463 1.00 56.56 C
ATOM 10 O3' A B2441 12.733 -58.037 33.495 1.00 56.27 O
ATOM 11 C2' A B2441 13.757 -60.041 32.695 1.00 56.95 C
ATOM 12 O2' A B2441 13.639 -60.416 34.040 1.00 56.76 O
ATOM 13 C1' A B2441 12.647 -60.659 31.851 1.00 57.52 C
ATOM 14 N9 A B2441 12.899 -62.044 31.437 1.00 58.05 N
ATOM 15 C8 A B2441 11.969 -63.046 31.270 1.00 58.56 C
ATOM 16 N7 A B2441 12.452 -64.208 30.938 1.00 58.98 N
ATOM 17 C5 A B2441 13.819 -63.948 30.904 1.00 58.71 C
ATOM 18 C6 A B2441 14.938 -64.761 30.629 1.00 58.91 C
ATOM 19 N6 A B2441 14.865 -66.051 30.296 1.00 59.47 N
ATOM 20 N1 A B2441 16.170 -64.214 30.668 1.00 58.55 N
ATOM 21 C2 A B2441 16.262 -62.925 30.977 1.00 58.01 C
ATOM 22 N3 A B2441 15.299 -62.065 31.271 1.00 57.77 N
ATOM 23 C4 A B2441 14.099 -62.636 31.221 1.00 58.14 C
ATOM 24 P G B2442 12.742 -56.457 33.807 1.00 54.41 P
ATOM 25 OP1 G B2442 14.173 -55.982 33.691 1.00 54.10 O
ATOM 26 OP2 G B2442 12.004 -56.254 35.102 1.00 54.16 O
ATOM 27 O5' G B2442 11.881 -55.886 32.607 1.00 54.66 O
TER
Atoms:
C4: (16.605,-65.644,26.477)
N3: (17.345,-64.538,26.071)
OP1: (12.330,-64.681,24.513)
OP2: (11.192,-64.895,26.794)
C2: (17.038,-63.218,26.248)
C1': (15.315,-61.725,27.211)
C3': (13.618,-60.191,26.738)
O5': (12.408,-62.779,26.155)
O4': (14.270,-61.926,28.167)
C5': (12.036,-62.093,27.342)
P: (11.601,-64.043,25.645)
C4': (13.118,-61.154,27.798)
C2': (14.662,-61.018,26.024)
O2': (15.575,-60.268,25.261)
N1: (15.852,-63.048,26.894)
O4: (17.000,-66.780,26.238)
O2: (17.728,-62.312,25.846)
C6: (15.087,-64.096,27.332)
C5: (15.406,-65.356,27.164)
O3': (14.263,-59.111,27.386)
N3: (17.345,-64.538,26.071)
OP1: (12.330,-64.681,24.513)
OP2: (11.192,-64.895,26.794)
C2: (17.038,-63.218,26.248)
C1': (15.315,-61.725,27.211)
C3': (13.618,-60.191,26.738)
O5': (12.408,-62.779,26.155)
O4': (14.270,-61.926,28.167)
C5': (12.036,-62.093,27.342)
P: (11.601,-64.043,25.645)
C4': (13.118,-61.154,27.798)
C2': (14.662,-61.018,26.024)
O2': (15.575,-60.268,25.261)
N1: (15.852,-63.048,26.894)
O4: (17.000,-66.780,26.238)
O2: (17.728,-62.312,25.846)
C6: (15.087,-64.096,27.332)
C5: (15.406,-65.356,27.164)
O3': (14.263,-59.111,27.386)
OP1: (12.546,-57.623,26.341)
OP2: (14.670,-56.707,27.466)
C3': (13.557,-58.555,32.463)
C1': (12.647,-60.659,31.851)
C5': (13.590,-57.802,30.027)
O4': (12.534,-59.839,30.716)
C8: (11.969,-63.046,31.270)
O2': (13.639,-60.416,34.040)
C6: (14.938,-64.761,30.629)
C5: (13.819,-63.948,30.904)
C4: (14.099,-62.636,31.221)
P: (13.565,-57.681,27.452)
C4': (12.828,-58.475,31.114)
C2': (13.757,-60.041,32.695)
C2: (16.262,-62.925,30.977)
N1: (16.170,-64.214,30.668)
N3: (15.299,-62.065,31.271)
N6: (14.865,-66.051,30.296)
N7: (12.452,-64.208,30.938)
N9: (12.899,-62.044,31.437)
O5': (12.833,-57.709,28.852)
O3': (12.733,-58.037,33.495)
OP2: (14.670,-56.707,27.466)
C3': (13.557,-58.555,32.463)
C1': (12.647,-60.659,31.851)
C5': (13.590,-57.802,30.027)
O4': (12.534,-59.839,30.716)
C8: (11.969,-63.046,31.270)
O2': (13.639,-60.416,34.040)
C6: (14.938,-64.761,30.629)
C5: (13.819,-63.948,30.904)
C4: (14.099,-62.636,31.221)
P: (13.565,-57.681,27.452)
C4': (12.828,-58.475,31.114)
C2': (13.757,-60.041,32.695)
C2: (16.262,-62.925,30.977)
N1: (16.170,-64.214,30.668)
N3: (15.299,-62.065,31.271)
N6: (14.865,-66.051,30.296)
N7: (12.452,-64.208,30.938)
N9: (12.899,-62.044,31.437)
O5': (12.833,-57.709,28.852)
O3': (12.733,-58.037,33.495)
Image (generated by PyMOL):