ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:976:9102

Extra

PDB:
ATOM 1 O3' G A 75 45.086 61.839 128.947 1.00 66.80 O
ATOM 2 P A A 76 45.151 63.203 128.079 1.00 66.95 P
ATOM 3 OP1 A A 76 45.935 62.957 126.839 1.00 66.99 O
ATOM 4 OP2 A A 76 45.570 64.285 129.003 1.00 67.70 O
ATOM 5 O5' A A 76 43.648 63.547 127.685 1.00 65.25 O
ATOM 6 C5' A A 76 42.657 62.530 127.597 1.00 63.99 C
ATOM 7 C4' A A 76 41.717 62.821 126.463 1.00 63.31 C
ATOM 8 O4' A A 76 42.464 62.893 125.214 1.00 63.26 O
ATOM 9 C3' A A 76 40.681 61.733 126.261 1.00 64.89 C
ATOM 10 O3' A A 76 39.492 62.312 125.754 1.00 65.11 O
ATOM 11 C2' A A 76 41.337 60.848 125.208 1.00 64.81 C
ATOM 12 O2' A A 76 40.415 60.043 124.499 1.00 67.12 O
ATOM 13 C1' A A 76 41.991 61.903 124.319 1.00 62.97 C
ATOM 14 N9 A A 76 43.112 61.411 123.514 1.00 60.40 N
ATOM 15 C8 A A 76 44.453 61.481 123.786 1.00 59.80 C
ATOM 16 N7 A A 76 45.209 60.939 122.863 1.00 58.93 N
ATOM 17 C5 A A 76 44.305 60.483 121.918 1.00 58.63 C
ATOM 18 C6 A A 76 44.474 59.814 120.694 1.00 59.41 C
ATOM 19 N6 A A 76 45.665 59.465 120.194 1.00 59.66 N
ATOM 20 N1 A A 76 43.365 59.507 119.989 1.00 59.04 N
ATOM 21 C2 A A 76 42.175 59.849 120.492 1.00 58.86 C
ATOM 22 N3 A A 76 41.889 60.475 121.629 1.00 58.66 N
ATOM 23 C4 A A 76 43.011 60.768 122.304 1.00 58.88 C
ATOM 24 P G A 77 38.076 61.824 126.321 1.00 67.86 P
ATOM 25 OP1 G A 77 37.813 62.651 127.535 1.00 65.92 O
ATOM 26 OP2 G A 77 38.109 60.333 126.431 1.00 67.23 O
ATOM 27 O5' G A 77 37.045 62.222 125.171 1.00 64.25 O
TER

ATOM 1 O3' G B 101 42.015 60.972 114.107 1.00 44.81 O
ATOM 2 P A B 102 41.884 59.881 115.275 1.00 43.98 P
ATOM 3 OP1 A B 102 42.534 58.635 114.774 1.00 39.59 O
ATOM 4 OP2 A B 102 40.477 59.838 115.748 1.00 44.24 O
ATOM 5 O5' A B 102 42.759 60.495 116.448 1.00 42.16 O
ATOM 6 C5' A B 102 44.043 59.947 116.749 1.00 43.94 C
ATOM 7 C4' A B 102 45.092 60.509 115.815 1.00 43.55 C
ATOM 8 O4' A B 102 45.187 61.948 115.976 1.00 42.72 O
ATOM 9 C3' A B 102 46.481 59.996 116.131 1.00 45.37 C
ATOM 10 O3' A B 102 46.726 58.761 115.484 1.00 46.28 O
ATOM 11 C2' A B 102 47.378 61.132 115.678 1.00 44.47 C
ATOM 12 O2' A B 102 47.545 61.166 114.276 1.00 46.69 O
ATOM 13 C1' A B 102 46.542 62.334 116.100 1.00 43.19 C
ATOM 14 N9 A B 102 46.761 62.751 117.484 1.00 43.58 N
ATOM 15 C8 A B 102 45.851 62.725 118.508 1.00 45.19 C
ATOM 16 N7 A B 102 46.310 63.201 119.634 1.00 46.04 N
ATOM 17 C5 A B 102 47.615 63.558 119.337 1.00 44.90 C
ATOM 18 C6 A B 102 48.633 64.132 120.110 1.00 45.53 C
ATOM 19 N6 A B 102 48.484 64.485 121.391 1.00 46.01 N
ATOM 20 N1 A B 102 49.824 64.345 119.516 1.00 46.28 N
ATOM 21 C2 A B 102 49.965 64.018 118.228 1.00 46.34 C
ATOM 22 N3 A B 102 49.077 63.486 117.395 1.00 46.80 N
ATOM 23 C4 A B 102 47.910 63.274 118.020 1.00 44.54 C
ATOM 24 P A B 103 47.470 57.595 116.285 1.00 48.00 P
ATOM 25 OP1 A B 103 47.812 56.546 115.297 1.00 47.53 O
ATOM 26 OP2 A B 103 46.682 57.249 117.502 1.00 49.84 O
ATOM 27 O5' A B 103 48.814 58.282 116.776 1.00 48.69 O
TER

Atoms:
OP1: (45.935,62.957,126.839)
OP2: (45.570,64.285,129.003)
C3': (40.681,61.733,126.261)
C1': (41.991,61.903,124.319)
C5': (42.657,62.530,127.597)
O4': (42.464,62.893,125.214)
C8: (44.453,61.481,123.786)
O2': (40.415,60.043,124.499)
C6: (44.474,59.814,120.694)
C5: (44.305,60.483,121.918)
C4: (43.011,60.768,122.304)
P: (45.151,63.203,128.079)
C4': (41.717,62.821,126.463)
C2': (41.337,60.848,125.208)
C2: (42.175,59.849,120.492)
N1: (43.365,59.507,119.989)
N3: (41.889,60.475,121.629)
N6: (45.665,59.465,120.194)
N7: (45.209,60.939,122.863)
N9: (43.112,61.411,123.514)
O5': (43.648,63.547,127.685)
O3': (39.492,62.312,125.754)
OP1: (42.534,58.635,114.774)
OP2: (40.477,59.838,115.748)
C3': (46.481,59.996,116.131)
C1': (46.542,62.334,116.100)
C5': (44.043,59.947,116.749)
O4': (45.187,61.948,115.976)
C8: (45.851,62.725,118.508)
O2': (47.545,61.166,114.276)
C6: (48.633,64.132,120.110)
C5: (47.615,63.558,119.337)
C4: (47.910,63.274,118.020)
P: (41.884,59.881,115.275)
C4': (45.092,60.509,115.815)
C2': (47.378,61.132,115.678)
C2: (49.965,64.018,118.228)
N1: (49.824,64.345,119.516)
N3: (49.077,63.486,117.395)
N6: (48.484,64.485,121.391)
N7: (46.310,63.201,119.634)
N9: (46.761,62.751,117.484)
O5': (42.759,60.495,116.448)
O3': (46.726,58.761,115.484)
Image (generated by PyMOL):
PyMOL image
show in jmol