Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X8:X9
Extra
PDB:
ATOM 1 O3' A A 7 3.686 -2.816 13.484 1.00 51.06 O
ATOM 2 P U A 8 4.179 -1.557 14.341 1.00 51.80 P
ATOM 3 OP1 U A 8 3.115 -1.264 15.329 1.00 52.60 O
ATOM 4 OP2 U A 8 4.619 -0.503 13.405 1.00 53.78 O
ATOM 5 O5' U A 8 5.486 -2.092 15.075 1.00 51.92 O
ATOM 6 C5' U A 8 5.987 -1.591 16.311 1.00 51.19 C
ATOM 7 C4' U A 8 6.879 -2.668 16.919 1.00 50.54 C
ATOM 8 O4' U A 8 6.085 -3.508 17.802 1.00 49.87 O
ATOM 9 C3' U A 8 7.528 -3.610 15.901 1.00 50.18 C
ATOM 10 O3' U A 8 8.841 -4.010 16.296 1.00 50.74 O
ATOM 11 C2' U A 8 6.571 -4.801 15.910 1.00 49.88 C
ATOM 12 O2' U A 8 7.179 -6.015 15.523 1.00 50.30 O
ATOM 13 C1' U A 8 6.142 -4.856 17.374 1.00 49.31 C
ATOM 14 N1 U A 8 4.810 -5.528 17.606 1.00 48.69 N
ATOM 15 C2 U A 8 4.761 -6.733 18.298 1.00 48.37 C
ATOM 16 O2 U A 8 5.739 -7.303 18.751 1.00 48.30 O
ATOM 17 N3 U A 8 3.503 -7.270 18.451 1.00 48.26 N
ATOM 18 C4 U A 8 2.310 -6.730 17.998 1.00 48.82 C
ATOM 19 O4 U A 8 1.260 -7.321 18.216 1.00 48.52 O
ATOM 20 C5 U A 8 2.436 -5.476 17.289 1.00 48.77 C
ATOM 21 C6 U A 8 3.654 -4.937 17.122 1.00 48.33 C
ATOM 22 P A A 9 10.175 -3.136 16.115 1.00 50.23 P
ATOM 23 OP1 A A 9 10.011 -2.092 15.086 1.00 50.23 O
ATOM 24 OP2 A A 9 11.282 -4.109 15.975 1.00 50.55 O
ATOM 25 O5' A A 9 10.282 -2.385 17.519 1.00 50.12 O
TER
ATOM 1 O3' U B 8 8.841 -4.010 16.296 1.00 50.74 O
ATOM 2 P A B 9 10.175 -3.136 16.115 1.00 50.23 P
ATOM 3 OP1 A B 9 10.011 -2.092 15.086 1.00 50.23 O
ATOM 4 OP2 A B 9 11.282 -4.109 15.975 1.00 50.55 O
ATOM 5 O5' A B 9 10.282 -2.385 17.519 1.00 50.12 O
ATOM 6 C5' A B 9 10.327 -3.108 18.744 1.00 50.35 C
ATOM 7 C4' A B 9 10.190 -2.166 19.928 1.00 50.05 C
ATOM 8 O4' A B 9 9.013 -1.338 19.768 1.00 50.07 O
ATOM 9 C3' A B 9 9.958 -2.883 21.242 1.00 50.07 C
ATOM 10 O3' A B 9 11.203 -3.257 21.831 1.00 50.64 O
ATOM 11 C2' A B 9 9.150 -1.892 22.079 1.00 50.08 C
ATOM 12 O2' A B 9 9.951 -1.005 22.831 1.00 50.07 O
ATOM 13 C1' A B 9 8.369 -1.126 21.011 1.00 49.95 C
ATOM 14 N9 A B 9 6.939 -1.451 20.869 1.00 49.92 N
ATOM 15 C8 A B 9 5.969 -0.519 20.648 1.00 50.03 C
ATOM 16 N7 A B 9 4.759 -1.005 20.544 1.00 49.88 N
ATOM 17 C5 A B 9 4.936 -2.363 20.706 1.00 50.14 C
ATOM 18 C6 A B 9 4.017 -3.438 20.700 1.00 50.27 C
ATOM 19 N6 A B 9 2.705 -3.263 20.517 1.00 49.87 N
ATOM 20 N1 A B 9 4.497 -4.689 20.891 1.00 50.17 N
ATOM 21 C2 A B 9 5.817 -4.848 21.075 1.00 49.72 C
ATOM 22 N3 A B 9 6.768 -3.913 21.096 1.00 49.82 N
ATOM 23 C4 A B 9 6.272 -2.670 20.908 1.00 49.85 C
ATOM 24 P A B 10 11.622 -4.805 21.851 1.00 51.06 P
ATOM 25 OP1 A B 10 12.379 -5.059 23.091 1.00 52.18 O
ATOM 26 OP2 A B 10 12.229 -5.154 20.547 1.00 51.75 O
ATOM 27 O5' A B 10 10.212 -5.561 21.924 1.00 51.76 O
TER
ATOM 2 P U A 8 4.179 -1.557 14.341 1.00 51.80 P
ATOM 3 OP1 U A 8 3.115 -1.264 15.329 1.00 52.60 O
ATOM 4 OP2 U A 8 4.619 -0.503 13.405 1.00 53.78 O
ATOM 5 O5' U A 8 5.486 -2.092 15.075 1.00 51.92 O
ATOM 6 C5' U A 8 5.987 -1.591 16.311 1.00 51.19 C
ATOM 7 C4' U A 8 6.879 -2.668 16.919 1.00 50.54 C
ATOM 8 O4' U A 8 6.085 -3.508 17.802 1.00 49.87 O
ATOM 9 C3' U A 8 7.528 -3.610 15.901 1.00 50.18 C
ATOM 10 O3' U A 8 8.841 -4.010 16.296 1.00 50.74 O
ATOM 11 C2' U A 8 6.571 -4.801 15.910 1.00 49.88 C
ATOM 12 O2' U A 8 7.179 -6.015 15.523 1.00 50.30 O
ATOM 13 C1' U A 8 6.142 -4.856 17.374 1.00 49.31 C
ATOM 14 N1 U A 8 4.810 -5.528 17.606 1.00 48.69 N
ATOM 15 C2 U A 8 4.761 -6.733 18.298 1.00 48.37 C
ATOM 16 O2 U A 8 5.739 -7.303 18.751 1.00 48.30 O
ATOM 17 N3 U A 8 3.503 -7.270 18.451 1.00 48.26 N
ATOM 18 C4 U A 8 2.310 -6.730 17.998 1.00 48.82 C
ATOM 19 O4 U A 8 1.260 -7.321 18.216 1.00 48.52 O
ATOM 20 C5 U A 8 2.436 -5.476 17.289 1.00 48.77 C
ATOM 21 C6 U A 8 3.654 -4.937 17.122 1.00 48.33 C
ATOM 22 P A A 9 10.175 -3.136 16.115 1.00 50.23 P
ATOM 23 OP1 A A 9 10.011 -2.092 15.086 1.00 50.23 O
ATOM 24 OP2 A A 9 11.282 -4.109 15.975 1.00 50.55 O
ATOM 25 O5' A A 9 10.282 -2.385 17.519 1.00 50.12 O
TER
ATOM 1 O3' U B 8 8.841 -4.010 16.296 1.00 50.74 O
ATOM 2 P A B 9 10.175 -3.136 16.115 1.00 50.23 P
ATOM 3 OP1 A B 9 10.011 -2.092 15.086 1.00 50.23 O
ATOM 4 OP2 A B 9 11.282 -4.109 15.975 1.00 50.55 O
ATOM 5 O5' A B 9 10.282 -2.385 17.519 1.00 50.12 O
ATOM 6 C5' A B 9 10.327 -3.108 18.744 1.00 50.35 C
ATOM 7 C4' A B 9 10.190 -2.166 19.928 1.00 50.05 C
ATOM 8 O4' A B 9 9.013 -1.338 19.768 1.00 50.07 O
ATOM 9 C3' A B 9 9.958 -2.883 21.242 1.00 50.07 C
ATOM 10 O3' A B 9 11.203 -3.257 21.831 1.00 50.64 O
ATOM 11 C2' A B 9 9.150 -1.892 22.079 1.00 50.08 C
ATOM 12 O2' A B 9 9.951 -1.005 22.831 1.00 50.07 O
ATOM 13 C1' A B 9 8.369 -1.126 21.011 1.00 49.95 C
ATOM 14 N9 A B 9 6.939 -1.451 20.869 1.00 49.92 N
ATOM 15 C8 A B 9 5.969 -0.519 20.648 1.00 50.03 C
ATOM 16 N7 A B 9 4.759 -1.005 20.544 1.00 49.88 N
ATOM 17 C5 A B 9 4.936 -2.363 20.706 1.00 50.14 C
ATOM 18 C6 A B 9 4.017 -3.438 20.700 1.00 50.27 C
ATOM 19 N6 A B 9 2.705 -3.263 20.517 1.00 49.87 N
ATOM 20 N1 A B 9 4.497 -4.689 20.891 1.00 50.17 N
ATOM 21 C2 A B 9 5.817 -4.848 21.075 1.00 49.72 C
ATOM 22 N3 A B 9 6.768 -3.913 21.096 1.00 49.82 N
ATOM 23 C4 A B 9 6.272 -2.670 20.908 1.00 49.85 C
ATOM 24 P A B 10 11.622 -4.805 21.851 1.00 51.06 P
ATOM 25 OP1 A B 10 12.379 -5.059 23.091 1.00 52.18 O
ATOM 26 OP2 A B 10 12.229 -5.154 20.547 1.00 51.75 O
ATOM 27 O5' A B 10 10.212 -5.561 21.924 1.00 51.76 O
TER
Atoms:
C4: (2.310,-6.730,17.998)
N3: (3.503,-7.270,18.451)
OP1: (3.115,-1.264,15.329)
OP2: (4.619,-0.503,13.405)
C2: (4.761,-6.733,18.298)
C1': (6.142,-4.856,17.374)
C3': (7.528,-3.610,15.901)
O5': (5.486,-2.092,15.075)
O4': (6.085,-3.508,17.802)
C5': (5.987,-1.591,16.311)
P: (4.179,-1.557,14.341)
C4': (6.879,-2.668,16.919)
C2': (6.571,-4.801,15.910)
O2': (7.179,-6.015,15.523)
N1: (4.810,-5.528,17.606)
O4: (1.260,-7.321,18.216)
O2: (5.739,-7.303,18.751)
C6: (3.654,-4.937,17.122)
C5: (2.436,-5.476,17.289)
O3': (8.841,-4.010,16.296)
N3: (3.503,-7.270,18.451)
OP1: (3.115,-1.264,15.329)
OP2: (4.619,-0.503,13.405)
C2: (4.761,-6.733,18.298)
C1': (6.142,-4.856,17.374)
C3': (7.528,-3.610,15.901)
O5': (5.486,-2.092,15.075)
O4': (6.085,-3.508,17.802)
C5': (5.987,-1.591,16.311)
P: (4.179,-1.557,14.341)
C4': (6.879,-2.668,16.919)
C2': (6.571,-4.801,15.910)
O2': (7.179,-6.015,15.523)
N1: (4.810,-5.528,17.606)
O4: (1.260,-7.321,18.216)
O2: (5.739,-7.303,18.751)
C6: (3.654,-4.937,17.122)
C5: (2.436,-5.476,17.289)
O3': (8.841,-4.010,16.296)
OP1: (10.011,-2.092,15.086)
OP2: (11.282,-4.109,15.975)
C3': (9.958,-2.883,21.242)
C1': (8.369,-1.126,21.011)
C5': (10.327,-3.108,18.744)
O4': (9.013,-1.338,19.768)
C8: (5.969,-0.519,20.648)
O2': (9.951,-1.005,22.831)
C6: (4.017,-3.438,20.700)
C5: (4.936,-2.363,20.706)
C4: (6.272,-2.670,20.908)
P: (10.175,-3.136,16.115)
C4': (10.190,-2.166,19.928)
C2': (9.150,-1.892,22.079)
C2: (5.817,-4.848,21.075)
N1: (4.497,-4.689,20.891)
N3: (6.768,-3.913,21.096)
N6: (2.705,-3.263,20.517)
N7: (4.759,-1.005,20.544)
N9: (6.939,-1.451,20.869)
O5': (10.282,-2.385,17.519)
O3': (11.203,-3.257,21.831)
OP2: (11.282,-4.109,15.975)
C3': (9.958,-2.883,21.242)
C1': (8.369,-1.126,21.011)
C5': (10.327,-3.108,18.744)
O4': (9.013,-1.338,19.768)
C8: (5.969,-0.519,20.648)
O2': (9.951,-1.005,22.831)
C6: (4.017,-3.438,20.700)
C5: (4.936,-2.363,20.706)
C4: (6.272,-2.670,20.908)
P: (10.175,-3.136,16.115)
C4': (10.190,-2.166,19.928)
C2': (9.150,-1.892,22.079)
C2: (5.817,-4.848,21.075)
N1: (4.497,-4.689,20.891)
N3: (6.768,-3.913,21.096)
N6: (2.705,-3.263,20.517)
N7: (4.759,-1.005,20.544)
N9: (6.939,-1.451,20.869)
O5': (10.282,-2.385,17.519)
O3': (11.203,-3.257,21.831)
Image (generated by PyMOL):