ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0397:0396

Extra

PDB:
ATOM 1 O3' A A 396 97.156 91.511 14.093 1.00 71.03 O
ATOM 2 P U A 397 97.747 92.142 12.734 1.00 74.14 P
ATOM 3 OP1 U A 397 98.418 91.029 12.017 1.00 74.57 O
ATOM 4 OP2 U A 397 98.507 93.378 13.040 1.00 75.43 O
ATOM 5 O5' U A 397 96.455 92.573 11.911 1.00 74.10 O
ATOM 6 C5' U A 397 95.320 91.704 11.832 1.00 75.80 C
ATOM 7 C4' U A 397 94.109 92.478 11.391 1.00 77.47 C
ATOM 8 O4' U A 397 93.831 93.516 12.373 1.00 78.58 O
ATOM 9 C3' U A 397 94.239 93.189 10.047 1.00 78.29 C
ATOM 10 O3' U A 397 92.969 93.209 9.412 1.00 78.42 O
ATOM 11 C2' U A 397 94.631 94.604 10.454 1.00 78.86 C
ATOM 12 O2' U A 397 94.271 95.583 9.500 1.00 78.90 O
ATOM 13 C1' U A 397 93.814 94.779 11.733 1.00 79.03 C
ATOM 14 N1 U A 397 94.350 95.790 12.659 1.00 79.29 N
ATOM 15 C2 U A 397 93.530 96.871 12.978 1.00 78.56 C
ATOM 16 O2 U A 397 92.404 97.011 12.524 1.00 77.22 O
ATOM 17 N3 U A 397 94.084 97.781 13.847 1.00 78.51 N
ATOM 18 C4 U A 397 95.343 97.727 14.418 1.00 79.45 C
ATOM 19 O4 U A 397 95.698 98.625 15.183 1.00 80.62 O
ATOM 20 C5 U A 397 96.127 96.585 14.040 1.00 78.98 C
ATOM 21 C6 U A 397 95.619 95.679 13.198 1.00 78.43 C
ATOM 22 P A A 398 92.827 92.714 7.892 1.00 77.69 P
ATOM 23 OP1 A A 398 93.874 91.701 7.596 1.00 77.37 O
ATOM 24 OP2 A A 398 92.699 93.914 7.027 1.00 77.15 O
ATOM 25 O5' A A 398 91.412 91.993 7.886 1.00 78.73 O
TER

ATOM 1 O3' A B 395 99.678 93.806 19.248 1.00 68.34 O
ATOM 2 P A B 396 99.759 94.433 17.764 1.00 67.89 P
ATOM 3 OP1 A B 396 101.052 93.989 17.180 1.00 68.19 O
ATOM 4 OP2 A B 396 99.445 95.883 17.816 1.00 67.63 O
ATOM 5 O5' A B 396 98.574 93.713 16.981 1.00 65.73 O
ATOM 6 C5' A B 396 98.500 92.281 16.913 1.00 65.29 C
ATOM 7 C4' A B 396 97.119 91.857 16.487 1.00 66.46 C
ATOM 8 O4' A B 396 96.154 92.418 17.412 1.00 64.91 O
ATOM 9 C3' A B 396 96.670 92.365 15.127 1.00 67.86 C
ATOM 10 O3' A B 396 97.156 91.511 14.093 1.00 71.03 O
ATOM 11 C2' A B 396 95.151 92.335 15.258 1.00 66.58 C
ATOM 12 O2' A B 396 94.620 91.032 15.099 1.00 65.87 O
ATOM 13 C1' A B 396 94.969 92.765 16.719 1.00 64.72 C
ATOM 14 N9 A B 396 94.727 94.195 16.927 1.00 62.19 N
ATOM 15 C8 A B 396 95.642 95.168 17.258 1.00 61.36 C
ATOM 16 N7 A B 396 95.118 96.361 17.399 1.00 59.65 N
ATOM 17 C5 A B 396 93.771 96.165 17.140 1.00 60.37 C
ATOM 18 C6 A B 396 92.680 97.042 17.128 1.00 61.05 C
ATOM 19 N6 A B 396 92.779 98.346 17.393 1.00 61.37 N
ATOM 20 N1 A B 396 91.465 96.528 16.830 1.00 60.25 N
ATOM 21 C2 A B 396 91.370 95.221 16.565 1.00 59.68 C
ATOM 22 N3 A B 396 92.322 94.296 16.544 1.00 59.54 N
ATOM 23 C4 A B 396 93.515 94.838 16.843 1.00 60.70 C
ATOM 24 P U B 397 97.747 92.142 12.734 1.00 74.14 P
ATOM 25 OP1 U B 397 98.418 91.029 12.017 1.00 74.57 O
ATOM 26 OP2 U B 397 98.507 93.378 13.040 1.00 75.43 O
ATOM 27 O5' U B 397 96.455 92.573 11.911 1.00 74.10 O
TER

Atoms:
C4: (95.343,97.727,14.418)
N3: (94.084,97.781,13.847)
OP1: (98.418,91.029,12.017)
OP2: (98.507,93.378,13.040)
C2: (93.530,96.871,12.978)
C1': (93.814,94.779,11.733)
C3': (94.239,93.189,10.047)
O5': (96.455,92.573,11.911)
O4': (93.831,93.516,12.373)
C5': (95.320,91.704,11.832)
P: (97.747,92.142,12.734)
C4': (94.109,92.478,11.391)
C2': (94.631,94.604,10.454)
O2': (94.271,95.583,9.500)
N1: (94.350,95.790,12.659)
O4: (95.698,98.625,15.183)
O2: (92.404,97.011,12.524)
C6: (95.619,95.679,13.198)
C5: (96.127,96.585,14.040)
O3': (92.969,93.209,9.412)
OP1: (101.052,93.989,17.180)
OP2: (99.445,95.883,17.816)
C3': (96.670,92.365,15.127)
C1': (94.969,92.765,16.719)
C5': (98.500,92.281,16.913)
O4': (96.154,92.418,17.412)
C8: (95.642,95.168,17.258)
O2': (94.620,91.032,15.099)
C6: (92.680,97.042,17.128)
C5: (93.771,96.165,17.140)
C4: (93.515,94.838,16.843)
P: (99.759,94.433,17.764)
C4': (97.119,91.857,16.487)
C2': (95.151,92.335,15.258)
C2: (91.370,95.221,16.565)
N1: (91.465,96.528,16.830)
N3: (92.322,94.296,16.544)
N6: (92.779,98.346,17.393)
N7: (95.118,96.361,17.399)
N9: (94.727,94.195,16.927)
O5': (98.574,93.713,16.981)
O3': (97.156,91.511,14.093)
Image (generated by PyMOL):
PyMOL image
show in jmol