Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1IK5:A4:A3
Extra
PDB:
ATOM 1 O3' A A 3 -2.270 -1.890 20.633 1.00 33.37 O
ATOM 2 P U A 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 3 OP1 U A 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 4 OP2 U A 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 5 O5' U A 4 -1.122 -3.350 18.903 1.00 33.42 O
ATOM 6 C5' U A 4 -1.650 -4.656 19.203 1.00 32.99 C
ATOM 7 C4' U A 4 -1.955 -5.427 17.930 1.00 33.82 C
ATOM 8 O4' U A 4 -3.076 -4.814 17.241 1.00 34.80 O
ATOM 9 C3' U A 4 -0.844 -5.501 16.890 1.00 35.75 C
ATOM 10 O3' U A 4 0.008 -6.625 17.149 1.00 39.38 O
ATOM 11 C2' U A 4 -1.620 -5.735 15.594 1.00 35.12 C
ATOM 12 O2' U A 4 -1.971 -7.088 15.405 1.00 37.05 O
ATOM 13 C1' U A 4 -2.906 -4.945 15.845 1.00 32.08 C
ATOM 14 N1 U A 4 -2.893 -3.616 15.216 1.00 31.66 N
ATOM 15 C2 U A 4 -3.492 -3.515 13.967 1.00 31.61 C
ATOM 16 O2 U A 4 -4.005 -4.459 13.408 1.00 28.50 O
ATOM 17 N3 U A 4 -3.458 -2.266 13.390 1.00 29.14 N
ATOM 18 C4 U A 4 -2.890 -1.122 13.894 1.00 31.92 C
ATOM 19 O4 U A 4 -2.891 -0.100 13.193 1.00 28.03 O
ATOM 20 C5 U A 4 -2.280 -1.282 15.197 1.00 30.88 C
ATOM 21 C6 U A 4 -2.310 -2.502 15.804 1.00 31.91 C
ATOM 22 P U A 5 1.583 -6.407 17.423 1.00 44.49 P
ATOM 23 OP1 U A 5 2.305 -7.704 17.383 1.00 43.99 O
ATOM 24 OP2 U A 5 1.676 -5.574 18.641 1.00 39.98 O
ATOM 25 O5' U A 5 2.111 -5.523 16.193 1.00 43.36 O
TER
ATOM 1 O3' U B 2 -3.347 3.975 20.661 1.00 34.72 O
ATOM 2 P A B 3 -2.126 3.031 20.225 1.00 32.99 P
ATOM 3 OP1 A B 3 -1.264 2.890 21.453 1.00 38.16 O
ATOM 4 OP2 A B 3 -1.525 3.466 18.963 1.00 31.09 O
ATOM 5 O5' A B 3 -2.807 1.614 20.022 1.00 29.44 O
ATOM 6 C5' A B 3 -3.532 1.024 21.084 1.00 31.72 C
ATOM 7 C4' A B 3 -4.096 -0.302 20.646 1.00 35.04 C
ATOM 8 O4' A B 3 -5.241 -0.082 19.791 1.00 34.37 O
ATOM 9 C3' A B 3 -3.168 -1.165 19.806 1.00 33.72 C
ATOM 10 O3' A B 3 -2.270 -1.890 20.633 1.00 33.37 O
ATOM 11 C2' A B 3 -4.153 -2.085 19.101 1.00 32.81 C
ATOM 12 O2' A B 3 -4.661 -3.096 19.938 1.00 30.10 O
ATOM 13 C1' A B 3 -5.310 -1.124 18.839 1.00 34.31 C
ATOM 14 N9 A B 3 -5.289 -0.551 17.495 1.00 34.00 N
ATOM 15 C8 A B 3 -4.796 0.657 17.049 1.00 33.90 C
ATOM 16 N7 A B 3 -5.010 0.870 15.768 1.00 32.24 N
ATOM 17 C5 A B 3 -5.675 -0.277 15.343 1.00 32.44 C
ATOM 18 C6 A B 3 -6.203 -0.670 14.086 1.00 32.51 C
ATOM 19 N6 A B 3 -6.181 0.106 12.988 1.00 29.06 N
ATOM 20 N1 A B 3 -6.773 -1.895 14.002 1.00 31.35 N
ATOM 21 C2 A B 3 -6.835 -2.651 15.105 1.00 32.97 C
ATOM 22 N3 A B 3 -6.403 -2.382 16.342 1.00 32.67 N
ATOM 23 C4 A B 3 -5.828 -1.170 16.389 1.00 32.20 C
ATOM 24 P U B 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 25 OP1 U B 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 26 OP2 U B 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 27 O5' U B 4 -1.122 -3.350 18.903 1.00 33.42 O
TER
ATOM 2 P U A 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 3 OP1 U A 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 4 OP2 U A 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 5 O5' U A 4 -1.122 -3.350 18.903 1.00 33.42 O
ATOM 6 C5' U A 4 -1.650 -4.656 19.203 1.00 32.99 C
ATOM 7 C4' U A 4 -1.955 -5.427 17.930 1.00 33.82 C
ATOM 8 O4' U A 4 -3.076 -4.814 17.241 1.00 34.80 O
ATOM 9 C3' U A 4 -0.844 -5.501 16.890 1.00 35.75 C
ATOM 10 O3' U A 4 0.008 -6.625 17.149 1.00 39.38 O
ATOM 11 C2' U A 4 -1.620 -5.735 15.594 1.00 35.12 C
ATOM 12 O2' U A 4 -1.971 -7.088 15.405 1.00 37.05 O
ATOM 13 C1' U A 4 -2.906 -4.945 15.845 1.00 32.08 C
ATOM 14 N1 U A 4 -2.893 -3.616 15.216 1.00 31.66 N
ATOM 15 C2 U A 4 -3.492 -3.515 13.967 1.00 31.61 C
ATOM 16 O2 U A 4 -4.005 -4.459 13.408 1.00 28.50 O
ATOM 17 N3 U A 4 -3.458 -2.266 13.390 1.00 29.14 N
ATOM 18 C4 U A 4 -2.890 -1.122 13.894 1.00 31.92 C
ATOM 19 O4 U A 4 -2.891 -0.100 13.193 1.00 28.03 O
ATOM 20 C5 U A 4 -2.280 -1.282 15.197 1.00 30.88 C
ATOM 21 C6 U A 4 -2.310 -2.502 15.804 1.00 31.91 C
ATOM 22 P U A 5 1.583 -6.407 17.423 1.00 44.49 P
ATOM 23 OP1 U A 5 2.305 -7.704 17.383 1.00 43.99 O
ATOM 24 OP2 U A 5 1.676 -5.574 18.641 1.00 39.98 O
ATOM 25 O5' U A 5 2.111 -5.523 16.193 1.00 43.36 O
TER
ATOM 1 O3' U B 2 -3.347 3.975 20.661 1.00 34.72 O
ATOM 2 P A B 3 -2.126 3.031 20.225 1.00 32.99 P
ATOM 3 OP1 A B 3 -1.264 2.890 21.453 1.00 38.16 O
ATOM 4 OP2 A B 3 -1.525 3.466 18.963 1.00 31.09 O
ATOM 5 O5' A B 3 -2.807 1.614 20.022 1.00 29.44 O
ATOM 6 C5' A B 3 -3.532 1.024 21.084 1.00 31.72 C
ATOM 7 C4' A B 3 -4.096 -0.302 20.646 1.00 35.04 C
ATOM 8 O4' A B 3 -5.241 -0.082 19.791 1.00 34.37 O
ATOM 9 C3' A B 3 -3.168 -1.165 19.806 1.00 33.72 C
ATOM 10 O3' A B 3 -2.270 -1.890 20.633 1.00 33.37 O
ATOM 11 C2' A B 3 -4.153 -2.085 19.101 1.00 32.81 C
ATOM 12 O2' A B 3 -4.661 -3.096 19.938 1.00 30.10 O
ATOM 13 C1' A B 3 -5.310 -1.124 18.839 1.00 34.31 C
ATOM 14 N9 A B 3 -5.289 -0.551 17.495 1.00 34.00 N
ATOM 15 C8 A B 3 -4.796 0.657 17.049 1.00 33.90 C
ATOM 16 N7 A B 3 -5.010 0.870 15.768 1.00 32.24 N
ATOM 17 C5 A B 3 -5.675 -0.277 15.343 1.00 32.44 C
ATOM 18 C6 A B 3 -6.203 -0.670 14.086 1.00 32.51 C
ATOM 19 N6 A B 3 -6.181 0.106 12.988 1.00 29.06 N
ATOM 20 N1 A B 3 -6.773 -1.895 14.002 1.00 31.35 N
ATOM 21 C2 A B 3 -6.835 -2.651 15.105 1.00 32.97 C
ATOM 22 N3 A B 3 -6.403 -2.382 16.342 1.00 32.67 N
ATOM 23 C4 A B 3 -5.828 -1.170 16.389 1.00 32.20 C
ATOM 24 P U B 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 25 OP1 U B 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 26 OP2 U B 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 27 O5' U B 4 -1.122 -3.350 18.903 1.00 33.42 O
TER
Atoms:
C4: (-2.890,-1.122,13.894)
N3: (-3.458,-2.266,13.390)
OP1: (-0.151,-3.057,21.192)
OP2: (-0.147,-1.128,19.486)
C2: (-3.492,-3.515,13.967)
C1': (-2.906,-4.945,15.845)
C3': (-0.844,-5.501,16.890)
O5': (-1.122,-3.350,18.903)
O4': (-3.076,-4.814,17.241)
C5': (-1.650,-4.656,19.203)
P: (-0.827,-2.297,20.076)
C4': (-1.955,-5.427,17.930)
C2': (-1.620,-5.735,15.594)
O2': (-1.971,-7.088,15.405)
N1: (-2.893,-3.616,15.216)
O4: (-2.891,-0.100,13.193)
O2: (-4.005,-4.459,13.408)
C6: (-2.310,-2.502,15.804)
C5: (-2.280,-1.282,15.197)
O3': (0.008,-6.625,17.149)
N3: (-3.458,-2.266,13.390)
OP1: (-0.151,-3.057,21.192)
OP2: (-0.147,-1.128,19.486)
C2: (-3.492,-3.515,13.967)
C1': (-2.906,-4.945,15.845)
C3': (-0.844,-5.501,16.890)
O5': (-1.122,-3.350,18.903)
O4': (-3.076,-4.814,17.241)
C5': (-1.650,-4.656,19.203)
P: (-0.827,-2.297,20.076)
C4': (-1.955,-5.427,17.930)
C2': (-1.620,-5.735,15.594)
O2': (-1.971,-7.088,15.405)
N1: (-2.893,-3.616,15.216)
O4: (-2.891,-0.100,13.193)
O2: (-4.005,-4.459,13.408)
C6: (-2.310,-2.502,15.804)
C5: (-2.280,-1.282,15.197)
O3': (0.008,-6.625,17.149)
OP1: (-1.264,2.890,21.453)
OP2: (-1.525,3.466,18.963)
C3': (-3.168,-1.165,19.806)
C1': (-5.310,-1.124,18.839)
C5': (-3.532,1.024,21.084)
O4': (-5.241,-0.082,19.791)
C8: (-4.796,0.657,17.049)
O2': (-4.661,-3.096,19.938)
C6: (-6.203,-0.670,14.086)
C5: (-5.675,-0.277,15.343)
C4: (-5.828,-1.170,16.389)
P: (-2.126,3.031,20.225)
C4': (-4.096,-0.302,20.646)
C2': (-4.153,-2.085,19.101)
C2: (-6.835,-2.651,15.105)
N1: (-6.773,-1.895,14.002)
N3: (-6.403,-2.382,16.342)
N6: (-6.181,0.106,12.988)
N7: (-5.010,0.870,15.768)
N9: (-5.289,-0.551,17.495)
O5': (-2.807,1.614,20.022)
O3': (-2.270,-1.890,20.633)
OP2: (-1.525,3.466,18.963)
C3': (-3.168,-1.165,19.806)
C1': (-5.310,-1.124,18.839)
C5': (-3.532,1.024,21.084)
O4': (-5.241,-0.082,19.791)
C8: (-4.796,0.657,17.049)
O2': (-4.661,-3.096,19.938)
C6: (-6.203,-0.670,14.086)
C5: (-5.675,-0.277,15.343)
C4: (-5.828,-1.170,16.389)
P: (-2.126,3.031,20.225)
C4': (-4.096,-0.302,20.646)
C2': (-4.153,-2.085,19.101)
C2: (-6.835,-2.651,15.105)
N1: (-6.773,-1.895,14.002)
N3: (-6.403,-2.382,16.342)
N6: (-6.181,0.106,12.988)
N7: (-5.010,0.870,15.768)
N9: (-5.289,-0.551,17.495)
O5': (-2.807,1.614,20.022)
O3': (-2.270,-1.890,20.633)
Image (generated by PyMOL):